RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MAPKBP1O60336 1514 aa19.07■□□□□ 0.64
UBE3B-209ENST00000539584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.07■□□□□ 0.64
UBE3B-209ENST00000539584 FGD5Q6ZNL6 1462 aa19.04■□□□□ 0.64
UBE3B-209ENST00000539584 CFAP43Q8NDM7 1665 aa19.04■□□□□ 0.64
UBE3B-209ENST00000539584 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.638e-9■■■■■ 47
UBE3B-209ENST00000539584 EFCAB5A4FU69 1503 aa19■□□□□ 0.63
UBE3B-209ENST00000539584 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
UBE3B-209ENST00000539584 PHLDB1Q86UU1 1377 aa18.98■□□□□ 0.63
UBE3B-209ENST00000539584 FYCO1Q9BQS8 1478 aa18.98■□□□□ 0.63
UBE3B-209ENST00000539584 ITGAEP38570 1179 aa18.96■□□□□ 0.63
UBE3B-209ENST00000539584 CASKIN1Q8WXD9 1431 aa18.93■□□□□ 0.62
UBE3B-209ENST00000539584 CC2D2AQ9P2K1 1620 aa18.93■□□□□ 0.62
UBE3B-209ENST00000539584 ABCA10Q8WWZ4 1543 aa18.93■□□□□ 0.62
UBE3B-209ENST00000539584 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
UBE3B-209ENST00000539584 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
UBE3B-209ENST00000539584 CUL7Q14999 1698 aa18.9■□□□□ 0.62
UBE3B-209ENST00000539584 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
UBE3B-209ENST00000539584 FMN1Q68DA7 1419 aa18.87■□□□□ 0.61
UBE3B-209ENST00000539584 FAM50AQ14320 339 aaKnown RBP18.87■□□□□ 0.61
UBE3B-209ENST00000539584 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
UBE3B-209ENST00000539584 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
UBE3B-209ENST00000539584 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.6
UBE3B-209ENST00000539584 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
UBE3B-209ENST00000539584 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
UBE3B-209ENST00000539584 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
UBE3B-209ENST00000539584 TOPBP1Q92547 1522 aa18.8■□□□□ 0.6
UBE3B-209ENST00000539584 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
UBE3B-209ENST00000539584 SIN3AQ96ST3 1273 aa18.78■□□□□ 0.6
UBE3B-209ENST00000539584 HFM1A2PYH4 1435 aa18.77■□□□□ 0.59
UBE3B-209ENST00000539584 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
UBE3B-209ENST00000539584 DDX10Q13206 875 aaKnown RBP18.76■□□□□ 0.59
UBE3B-209ENST00000539584 UACAQ9BZF9 1416 aa18.75■□□□□ 0.59
UBE3B-209ENST00000539584 SNAPC4Q5SXM2 1469 aa18.74■□□□□ 0.59
UBE3B-209ENST00000539584 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
UBE3B-209ENST00000539584 ANP32CO43423 234 aa18.73■□□□□ 0.59
UBE3B-209ENST00000539584 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
UBE3B-209ENST00000539584 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
UBE3B-209ENST00000539584 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
UBE3B-209ENST00000539584 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
UBE3B-209ENST00000539584 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
UBE3B-209ENST00000539584 MTUS2Q5JR59 1369 aa18.71■□□□□ 0.59
UBE3B-209ENST00000539584 SAMD9Q5K651 1589 aa18.71■□□□□ 0.59
UBE3B-209ENST00000539584 KCNH8Q96L42 1107 aa18.69■□□□□ 0.58
UBE3B-209ENST00000539584 MYOM3Q5VTT5 1437 aa18.67■□□□□ 0.58
UBE3B-209ENST00000539584 PTPN23Q9H3S7 1636 aa18.67■□□□□ 0.58
UBE3B-209ENST00000539584 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
UBE3B-209ENST00000539584 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
UBE3B-209ENST00000539584 NEFLP07196 543 aa18.66■□□□□ 0.58
UBE3B-209ENST00000539584 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
UBE3B-209ENST00000539584 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.58
UBE3B-209ENST00000539584 NAIPQ13075 1403 aa18.64■□□□□ 0.57
UBE3B-209ENST00000539584 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
UBE3B-209ENST00000539584 NCOA2Q15596 1464 aa18.63■□□□□ 0.57
UBE3B-209ENST00000539584 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
UBE3B-209ENST00000539584 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
UBE3B-209ENST00000539584 FKBP8Q14318 412 aa18.6■□□□□ 0.57
UBE3B-209ENST00000539584 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
UBE3B-209ENST00000539584 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
UBE3B-209ENST00000539584 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.57
UBE3B-209ENST00000539584 UGGT2Q9NYU1 1516 aa18.58■□□□□ 0.56
UBE3B-209ENST00000539584 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.56
UBE3B-209ENST00000539584 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
UBE3B-209ENST00000539584 ANP32EQ9BTT0 268 aa18.54■□□□□ 0.56
UBE3B-209ENST00000539584 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
UBE3B-209ENST00000539584 LRRIQ1Q96JM4 1722 aa18.53■□□□□ 0.56
UBE3B-209ENST00000539584 NESP48681 1621 aa18.52■□□□□ 0.56
UBE3B-209ENST00000539584 MIA2Q96PC5 1412 aa18.52■□□□□ 0.55
UBE3B-209ENST00000539584 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
UBE3B-209ENST00000539584 GCC2Q8IWJ2 1684 aa18.51■□□□□ 0.55
UBE3B-209ENST00000539584 HECW1Q76N89 1606 aa18.51■□□□□ 0.55
UBE3B-209ENST00000539584 TDRD9Q8NDG6 1382 aaKnown RBP18.48■□□□□ 0.55
UBE3B-209ENST00000539584 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
UBE3B-209ENST00000539584 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
UBE3B-209ENST00000539584 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
UBE3B-209ENST00000539584 BCANQ96GW7 911 aa18.44■□□□□ 0.54
UBE3B-209ENST00000539584 EIF4G2P78344 907 aaKnown RBP eCLIP18.42■□□□□ 0.54
UBE3B-209ENST00000539584 MAGI3Q5TCQ9 1506 aa18.41■□□□□ 0.54
UBE3B-209ENST00000539584 EPRSP07814 1512 aaKnown RBP18.4■□□□□ 0.54
UBE3B-209ENST00000539584 TARBP1Q13395 1621 aaKnown RBP18.4■□□□□ 0.54
UBE3B-209ENST00000539584 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
UBE3B-209ENST00000539584 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
UBE3B-209ENST00000539584 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
UBE3B-209ENST00000539584 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
UBE3B-209ENST00000539584 DENND4BO75064 1496 aaPredicted RBP18.37■□□□□ 0.53
UBE3B-209ENST00000539584 HSPA5P11021 654 aaKnown RBP18.37■□□□□ 0.53
UBE3B-209ENST00000539584 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
UBE3B-209ENST00000539584 MPHOSPH9Q99550 1183 aa18.35■□□□□ 0.53
UBE3B-209ENST00000539584 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
UBE3B-209ENST00000539584 RRP7BPQ9NSQ0 103 aa18.34■□□□□ 0.53
UBE3B-209ENST00000539584 WDR62O43379 1518 aa18.33■□□□□ 0.52
UBE3B-209ENST00000539584 NCOA1Q15788 1441 aa18.33■□□□□ 0.52
UBE3B-209ENST00000539584 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
UBE3B-209ENST00000539584 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
UBE3B-209ENST00000539584 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
UBE3B-209ENST00000539584 ANKRD30BQ9BXX2 1392 aa18.29■□□□□ 0.52
UBE3B-209ENST00000539584 CCDC7Q96M83 1385 aa18.28■□□□□ 0.52
UBE3B-209ENST00000539584 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
UBE3B-209ENST00000539584 CHIC2Q9UKJ5 165 aa18.28■□□□□ 0.52
UBE3B-209ENST00000539584 DAPK1P53355 1430 aa18.28■□□□□ 0.52
UBE3B-209ENST00000539584 CDK11AQ9UQ88 783 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms