RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 KIF21AQ7Z4S6 1674 aa10.56□□□□□ -0.72
MDM2-225ENST00000539479 RUSC2Q8N2Y8 1516 aa10.55□□□□□ -0.72
MDM2-225ENST00000539479 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
MDM2-225ENST00000539479 SOGA1O94964 1423 aa10.54□□□□□ -0.72
MDM2-225ENST00000539479 CEP164Q9UPV0 1460 aa10.51□□□□□ -0.73
MDM2-225ENST00000539479 TOPBP1Q92547 1522 aa10.51□□□□□ -0.73
MDM2-225ENST00000539479 DNMBPQ6XZF7 1577 aa10.5□□□□□ -0.73
MDM2-225ENST00000539479 PDS5BQ9NTI5 1447 aa10.5□□□□□ -0.73
MDM2-225ENST00000539479 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
MDM2-225ENST00000539479 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
MDM2-225ENST00000539479 FBLN2P98095 1184 aa10.48□□□□□ -0.73
MDM2-225ENST00000539479 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
MDM2-225ENST00000539479 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
MDM2-225ENST00000539479 LOC105371045A0A1W2PR82 267 aa10.46□□□□□ -0.73
MDM2-225ENST00000539479 POLA1P09884 1462 aaPredicted RBP10.45□□□□□ -0.74
MDM2-225ENST00000539479 FAM9AQ8IZU1 332 aaPredicted RBP10.45□□□□□ -0.74
MDM2-225ENST00000539479 THOC2Q8NI27 1593 aaKnown RBP10.44□□□□□ -0.74
MDM2-225ENST00000539479 MRC2Q9UBG0 1479 aa10.43□□□□□ -0.74
MDM2-225ENST00000539479 RAD54L2Q9Y4B4 1467 aa10.43□□□□□ -0.74
MDM2-225ENST00000539479 ATXN8OSP0DMR3 200 aa10.43□□□□□ -0.74
MDM2-225ENST00000539479 WDR62O43379 1518 aa10.42□□□□□ -0.74
MDM2-225ENST00000539479 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
MDM2-225ENST00000539479 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
MDM2-225ENST00000539479 CUX2O14529 1486 aa10.41□□□□□ -0.74
MDM2-225ENST00000539479 PRKAR2AP13861 404 aaKnown RBP10.4□□□□□ -0.74
MDM2-225ENST00000539479 EVX2Q03828 476 aa10.4□□□□□ -0.74
MDM2-225ENST00000539479 CLEC11AQ9Y240 323 aa10.4□□□□□ -0.74
MDM2-225ENST00000539479 ABCA10Q8WWZ4 1543 aa10.39□□□□□ -0.75
MDM2-225ENST00000539479 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
MDM2-225ENST00000539479 EEA1Q15075 1411 aa10.38□□□□□ -0.75
MDM2-225ENST00000539479 CSRNP3Q8WYN3 585 aa10.35□□□□□ -0.75
MDM2-225ENST00000539479 ERCC6Q03468 1493 aa10.35□□□□□ -0.75
MDM2-225ENST00000539479 PRXQ9BXM0 1461 aa10.35□□□□□ -0.75
MDM2-225ENST00000539479 ZBTB22O15209 634 aa10.34□□□□□ -0.75
MDM2-225ENST00000539479 ABCA5Q8WWZ7 1642 aa10.33□□□□□ -0.76
MDM2-225ENST00000539479 IGF1RP08069 1367 aa10.33□□□□□ -0.76
MDM2-225ENST00000539479 KIF21BO75037 1637 aa10.33□□□□□ -0.76
MDM2-225ENST00000539479 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
MDM2-225ENST00000539479 RAPGEF2Q9Y4G8 1499 aa10.32□□□□□ -0.76
MDM2-225ENST00000539479 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
MDM2-225ENST00000539479 ZNF608Q9ULD9 1512 aaPredicted RBP10.31□□□□□ -0.76
MDM2-225ENST00000539479 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
MDM2-225ENST00000539479 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
MDM2-225ENST00000539479 C19orf67A6NJJ6 358 aa10.28□□□□□ -0.76
MDM2-225ENST00000539479 GOLGA3Q08378 1498 aa10.27□□□□□ -0.77
MDM2-225ENST00000539479 IFT140Q96RY7 1462 aa10.27□□□□□ -0.77
MDM2-225ENST00000539479 AQRO60306 1485 aaKnown RBP eCLIP10.26□□□□□ -0.778e-7■■■■□ 20.6
MDM2-225ENST00000539479 ERICH3Q5RHP9 1530 aa10.26□□□□□ -0.77
MDM2-225ENST00000539479 GAPVD1Q14C86 1478 aa10.25□□□□□ -0.77
MDM2-225ENST00000539479 SSUH2Q9Y2M2 353 aa10.25□□□□□ -0.77
MDM2-225ENST00000539479 TNIKQ9UKE5 1360 aa10.25□□□□□ -0.77
MDM2-225ENST00000539479 EIF4G3O43432 1585 aaKnown RBP10.23□□□□□ -0.77
MDM2-225ENST00000539479 CARMIL1Q5VZK9 1371 aa10.23□□□□□ -0.77
MDM2-225ENST00000539479 PBRM1Q86U86 1689 aa10.22□□□□□ -0.77
MDM2-225ENST00000539479 GABBR2O75899 941 aa10.22□□□□□ -0.77
MDM2-225ENST00000539479 ADAMTS12P58397 1594 aa10.2□□□□□ -0.78
MDM2-225ENST00000539479 MKRN4PQ13434 485 aaPredicted RBP10.2□□□□□ -0.78
MDM2-225ENST00000539479 CUL7Q14999 1698 aa10.19□□□□□ -0.78
MDM2-225ENST00000539479 CEP162Q5TB80 1403 aa10.19□□□□□ -0.78
MDM2-225ENST00000539479 LHX8Q68G74 356 aa10.19□□□□□ -0.78
MDM2-225ENST00000539479 GRIN2BQ13224 1484 aa10.18□□□□□ -0.78
MDM2-225ENST00000539479 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
MDM2-225ENST00000539479 CHADLQ6NUI6 762 aa10.17□□□□□ -0.78
MDM2-225ENST00000539479 SNAPC4Q5SXM2 1469 aa10.17□□□□□ -0.78
MDM2-225ENST00000539479 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
MDM2-225ENST00000539479 FHAD1B1AJZ9 1412 aa10.14□□□□□ -0.79
MDM2-225ENST00000539479 ARAP1Q96P48 1450 aa10.12□□□□□ -0.79
MDM2-225ENST00000539479 PLSCR2Q9NRY7 297 aa10.12□□□□□ -0.79
MDM2-225ENST00000539479 CLIP1P30622 1438 aa10.11□□□□□ -0.79
MDM2-225ENST00000539479 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
MDM2-225ENST00000539479 ARHGAP35Q9NRY4 1499 aa10.1□□□□□ -0.79
MDM2-225ENST00000539479 GRIN2AQ12879 1464 aa10.08□□□□□ -0.8
MDM2-225ENST00000539479 CTTNBP2Q8WZ74 1663 aa10.08□□□□□ -0.8
MDM2-225ENST00000539479 CEP170Q5SW79 1584 aa10.07□□□□□ -0.8
MDM2-225ENST00000539479 SYNJ2O15056 1496 aa10.07□□□□□ -0.8
MDM2-225ENST00000539479 CD44P16070 742 aaKnown RBP10.07□□□□□ -0.8
MDM2-225ENST00000539479 NUP160Q12769 1436 aa10.05□□□□□ -0.8
MDM2-225ENST00000539479 SAMD9Q5K651 1589 aa10.04□□□□□ -0.8
MDM2-225ENST00000539479 RANGAP1P46060 587 aaPredicted RBP10.03□□□□□ -0.8
MDM2-225ENST00000539479 CLCN6P51797 869 aa10.03□□□□□ -0.8
MDM2-225ENST00000539479 VPS8Q8N3P4 1428 aa10.02□□□□□ -0.81
MDM2-225ENST00000539479 CHD1O14646 1710 aa10.02□□□□□ -0.81
MDM2-225ENST00000539479 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
MDM2-225ENST00000539479 KIAA0586Q9BVV6 1533 aa10.01□□□□□ -0.81
MDM2-225ENST00000539479 IQGAP2Q13576 1575 aa10.01□□□□□ -0.81
MDM2-225ENST00000539479 FHOD3Q2V2M9 1422 aa10□□□□□ -0.81
MDM2-225ENST00000539479 UGGT2Q9NYU1 1516 aa10□□□□□ -0.81
MDM2-225ENST00000539479 DISP1Q96F81 1524 aa9.99□□□□□ -0.81
MDM2-225ENST00000539479 EFCAB5A4FU69 1503 aa9.98□□□□□ -0.81
MDM2-225ENST00000539479 DCBLD2Q96PD2 775 aa9.97□□□□□ -0.81
MDM2-225ENST00000539479 P3H3Q8IVL6 736 aa9.96□□□□□ -0.82
MDM2-225ENST00000539479 CHMP7Q8WUX9 453 aaPredicted RBP9.96□□□□□ -0.82
MDM2-225ENST00000539479 PCF11O94913 1555 aaKnown RBP9.96□□□□□ -0.82
MDM2-225ENST00000539479 CLASP1Q7Z460 1538 aa9.95□□□□□ -0.82
MDM2-225ENST00000539479 KIAA0556O60303 1618 aa9.94□□□□□ -0.82
MDM2-225ENST00000539479 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
MDM2-225ENST00000539479 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
MDM2-225ENST00000539479 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
MDM2-225ENST00000539479 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
MDM2-225ENST00000539479 ERCC6L2Q5T890 1561 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms