RNA–Protein interactions for RNA: ENST00000536880.5

LDHC-204, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-204ENST00000536880 KIF21AQ7Z4S6 1674 aa14.02□□□□□ -0.16
LDHC-204ENST00000536880 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.16
LDHC-204ENST00000536880 MROH2BQ7Z745 1585 aa13.94□□□□□ -0.18
LDHC-204ENST00000536880 PIP4P2Q8N4L2 257 aa13.91□□□□□ -0.18
LDHC-204ENST00000536880 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
LDHC-204ENST00000536880 PDS5BQ9NTI5 1447 aa13.89□□□□□ -0.19
LDHC-204ENST00000536880 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
LDHC-204ENST00000536880 MIER1Q8N108 512 aa13.87□□□□□ -0.19
LDHC-204ENST00000536880 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
LDHC-204ENST00000536880 PLEKHG5O94827 1062 aa13.85□□□□□ -0.19
LDHC-204ENST00000536880 VASPP50552 380 aaPredicted RBP13.85□□□□□ -0.19
LDHC-204ENST00000536880 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
LDHC-204ENST00000536880 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
LDHC-204ENST00000536880 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
LDHC-204ENST00000536880 WIZO95785 1651 aa13.81□□□□□ -0.2
LDHC-204ENST00000536880 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
LDHC-204ENST00000536880 WDR62O43379 1518 aa13.8□□□□□ -0.2
LDHC-204ENST00000536880 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
LDHC-204ENST00000536880 POTEHQ6S545 545 aa13.74□□□□□ -0.21
LDHC-204ENST00000536880 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
LDHC-204ENST00000536880 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
LDHC-204ENST00000536880 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
LDHC-204ENST00000536880 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
LDHC-204ENST00000536880 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
LDHC-204ENST00000536880 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
LDHC-204ENST00000536880 CFTRP13569 1480 aa13.63□□□□□ -0.23
LDHC-204ENST00000536880 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
LDHC-204ENST00000536880 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
LDHC-204ENST00000536880 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
LDHC-204ENST00000536880 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
LDHC-204ENST00000536880 TOP2AP11388 1531 aaKnown RBP13.59□□□□□ -0.23
LDHC-204ENST00000536880 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
LDHC-204ENST00000536880 HAX1O00165 279 aa13.54□□□□□ -0.24
LDHC-204ENST00000536880 SPOCK2Q92563 424 aa13.52□□□□□ -0.25
LDHC-204ENST00000536880 RIMBP3CA6NJZ7 1639 aa13.51□□□□□ -0.25
LDHC-204ENST00000536880 RIMBP3BA6NNM3 1639 aa13.51□□□□□ -0.25
LDHC-204ENST00000536880 RIMBP3Q9UFD9 1639 aa13.51□□□□□ -0.25
LDHC-204ENST00000536880 CD44P16070 742 aaKnown RBP13.48□□□□□ -0.25
LDHC-204ENST00000536880 PAK3O75914 559 aaPredicted RBP13.47□□□□□ -0.25
LDHC-204ENST00000536880 ZNF608Q9ULD9 1512 aaPredicted RBP13.45□□□□□ -0.26
LDHC-204ENST00000536880 IFT140Q96RY7 1462 aa13.44□□□□□ -0.26
LDHC-204ENST00000536880 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
LDHC-204ENST00000536880 NUBP1P53384 320 aa13.44□□□□□ -0.26
LDHC-204ENST00000536880 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
LDHC-204ENST00000536880 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
LDHC-204ENST00000536880 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
LDHC-204ENST00000536880 ARHGEF11O15085 1522 aa13.42□□□□□ -0.26
LDHC-204ENST00000536880 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
LDHC-204ENST00000536880 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
LDHC-204ENST00000536880 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
LDHC-204ENST00000536880 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
LDHC-204ENST00000536880 DCAF8Q5TAQ9 597 aa13.39□□□□□ -0.27
LDHC-204ENST00000536880 CHD1O14646 1710 aa13.39□□□□□ -0.27
LDHC-204ENST00000536880 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
LDHC-204ENST00000536880 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
LDHC-204ENST00000536880 ABCC8Q09428 1581 aa13.35□□□□□ -0.27
LDHC-204ENST00000536880 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
LDHC-204ENST00000536880 GSE1Q14687 1217 aa13.34□□□□□ -0.27
LDHC-204ENST00000536880 EVX2Q03828 476 aa13.33□□□□□ -0.28
LDHC-204ENST00000536880 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
LDHC-204ENST00000536880 ARAP1Q96P48 1450 aa13.27□□□□□ -0.29
LDHC-204ENST00000536880 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
LDHC-204ENST00000536880 CYB5RLQ6IPT4 315 aa13.26□□□□□ -0.29
LDHC-204ENST00000536880 CCDC61Q9Y6R9 512 aa13.26□□□□□ -0.29
LDHC-204ENST00000536880 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
LDHC-204ENST00000536880 PHF12Q96QT6 1004 aa13.25□□□□□ -0.29
LDHC-204ENST00000536880 PYGBP11216 843 aa13.21□□□□□ -0.29
LDHC-204ENST00000536880 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
LDHC-204ENST00000536880 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
LDHC-204ENST00000536880 WDR97A6NE52 1622 aa13.18□□□□□ -0.3
LDHC-204ENST00000536880 CLASP1Q7Z460 1538 aa13.18□□□□□ -0.3
LDHC-204ENST00000536880 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
LDHC-204ENST00000536880 SOGA1O94964 1423 aa13.16□□□□□ -0.3
LDHC-204ENST00000536880 TDRD9Q8NDG6 1382 aaKnown RBP13.16□□□□□ -0.3
LDHC-204ENST00000536880 FGD5Q6ZNL6 1462 aa13.15□□□□□ -0.3
LDHC-204ENST00000536880 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
LDHC-204ENST00000536880 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
LDHC-204ENST00000536880 SYNJ1O43426 1573 aa13.14□□□□□ -0.31
LDHC-204ENST00000536880 MAP3K13O43283 966 aa13.13□□□□□ -0.31
LDHC-204ENST00000536880 ECM2O94769 699 aaPredicted RBP13.13□□□□□ -0.31
LDHC-204ENST00000536880 PKD2Q13563 968 aa13.13□□□□□ -0.31
LDHC-204ENST00000536880 MAGI1Q96QZ7 1491 aaPredicted RBP13.12□□□□□ -0.31
LDHC-204ENST00000536880 CUX1P39880 1505 aa13.12□□□□□ -0.31
LDHC-204ENST00000536880 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
LDHC-204ENST00000536880 CLCN6P51797 869 aa13.11□□□□□ -0.31
LDHC-204ENST00000536880 PCDHB13Q9Y5F0 798 aa13.11□□□□□ -0.31
LDHC-204ENST00000536880 GABBR2O75899 941 aa13.1□□□□□ -0.31
LDHC-204ENST00000536880 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
LDHC-204ENST00000536880 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
LDHC-204ENST00000536880 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
LDHC-204ENST00000536880 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
LDHC-204ENST00000536880 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
LDHC-204ENST00000536880 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
LDHC-204ENST00000536880 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
LDHC-204ENST00000536880 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
LDHC-204ENST00000536880 IFNL1Q8IU54 200 aa13.03□□□□□ -0.32
LDHC-204ENST00000536880 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
LDHC-204ENST00000536880 ABCA5Q8WWZ7 1642 aa13.02□□□□□ -0.32
LDHC-204ENST00000536880 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
LDHC-204ENST00000536880 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms