RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 PHLDB1Q86UU1 1377 aa14.75□□□□□ -0.05
DDB1-204ENST00000535147 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
DDB1-204ENST00000535147 SETD5Q9C0A6 1442 aa14.73□□□□□ -0.05
DDB1-204ENST00000535147 LRRC9Q6ZRR7 1453 aa14.72□□□□□ -0.05
DDB1-204ENST00000535147 DDX10Q13206 875 aaKnown RBP14.72□□□□□ -0.05
DDB1-204ENST00000535147 FGD5Q6ZNL6 1462 aa14.7□□□□□ -0.06
DDB1-204ENST00000535147 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
DDB1-204ENST00000535147 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
DDB1-204ENST00000535147 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
DDB1-204ENST00000535147 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
DDB1-204ENST00000535147 TSHZ2Q9NRE2 1034 aa14.66□□□□□ -0.06
DDB1-204ENST00000535147 BCANQ96GW7 911 aa14.65□□□□□ -0.06
DDB1-204ENST00000535147 PCF11O94913 1555 aaKnown RBP14.64□□□□□ -0.07
DDB1-204ENST00000535147 FHAD1B1AJZ9 1412 aa14.64□□□□□ -0.07
DDB1-204ENST00000535147 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
DDB1-204ENST00000535147 PRDM2Q13029 1718 aa14.63□□□□□ -0.07
DDB1-204ENST00000535147 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
DDB1-204ENST00000535147 FKBP8Q14318 412 aa14.58□□□□□ -0.07
DDB1-204ENST00000535147 RAD54L2Q9Y4B4 1467 aa14.58□□□□□ -0.08
DDB1-204ENST00000535147 CFAP43Q8NDM7 1665 aa14.58□□□□□ -0.08
DDB1-204ENST00000535147 DAXXQ9UER7 740 aaPredicted RBP14.56□□□□□ -0.08
DDB1-204ENST00000535147 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
DDB1-204ENST00000535147 TRIM52Q96A61 297 aa14.56□□□□□ -0.08
DDB1-204ENST00000535147 FANCD2Q9BXW9 1451 aa14.55□□□□□ -0.08
DDB1-204ENST00000535147 TIMELESSQ9UNS1 1208 aa14.54□□□□□ -0.08
DDB1-204ENST00000535147 FYCO1Q9BQS8 1478 aa14.52□□□□□ -0.08
DDB1-204ENST00000535147 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.09
DDB1-204ENST00000535147 ANP32CO43423 234 aa14.51□□□□□ -0.09
DDB1-204ENST00000535147 FGD6Q6ZV73 1430 aa14.5□□□□□ -0.09
DDB1-204ENST00000535147 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
DDB1-204ENST00000535147 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
DDB1-204ENST00000535147 PTPRKQ15262 1439 aa14.48□□□□□ -0.09
DDB1-204ENST00000535147 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
DDB1-204ENST00000535147 MTUS2Q5JR59 1369 aa14.47□□□□□ -0.09
DDB1-204ENST00000535147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
DDB1-204ENST00000535147 CCDC18Q5T9S5 1454 aa14.47□□□□□ -0.09
DDB1-204ENST00000535147 CCER2I3L3R5 266 aa14.47□□□□□ -0.09
DDB1-204ENST00000535147 EFCAB5A4FU69 1503 aa14.47□□□□□ -0.09
DDB1-204ENST00000535147 TOPBP1Q92547 1522 aa14.47□□□□□ -0.09
DDB1-204ENST00000535147 NESP48681 1621 aa14.46□□□□□ -0.1
DDB1-204ENST00000535147 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
DDB1-204ENST00000535147 AQRO60306 1485 aaKnown RBP eCLIP14.45□□□□□ -0.15e-8■■■■□ 21.1
DDB1-204ENST00000535147 CC2D2AQ9P2K1 1620 aa14.45□□□□□ -0.1
DDB1-204ENST00000535147 NEFLP07196 543 aa14.45□□□□□ -0.1
DDB1-204ENST00000535147 FMN1Q68DA7 1419 aa14.44□□□□□ -0.1
DDB1-204ENST00000535147 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
DDB1-204ENST00000535147 HFM1A2PYH4 1435 aa14.42□□□□□ -0.1
DDB1-204ENST00000535147 ANP32EQ9BTT0 268 aa14.42□□□□□ -0.1
DDB1-204ENST00000535147 UACAQ9BZF9 1416 aa14.42□□□□□ -0.1
DDB1-204ENST00000535147 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
DDB1-204ENST00000535147 CTTNBP2Q8WZ74 1663 aa14.41□□□□□ -0.1
DDB1-204ENST00000535147 NAIPQ13075 1403 aa14.4□□□□□ -0.1
DDB1-204ENST00000535147 PTPN23Q9H3S7 1636 aa14.39□□□□□ -0.11
DDB1-204ENST00000535147 CUL7Q14999 1698 aa14.39□□□□□ -0.11
DDB1-204ENST00000535147 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
DDB1-204ENST00000535147 RRP7BPQ9NSQ0 103 aa14.38□□□□□ -0.11
DDB1-204ENST00000535147 CHIC2Q9UKJ5 165 aa14.38□□□□□ -0.11
DDB1-204ENST00000535147 MYOM3Q5VTT5 1437 aa14.37□□□□□ -0.11
DDB1-204ENST00000535147 RTN4Q9NQC3 1192 aaKnown RBP14.36□□□□□ -0.11
DDB1-204ENST00000535147 LRRIQ1Q96JM4 1722 aa14.36□□□□□ -0.11
DDB1-204ENST00000535147 RBM19Q9Y4C8 960 aaKnown RBP14.36□□□□□ -0.11
DDB1-204ENST00000535147 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDB1-204ENST00000535147 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
DDB1-204ENST00000535147 URB2Q14146 1524 aaKnown RBP14.33□□□□□ -0.12
DDB1-204ENST00000535147 GRIN2BQ13224 1484 aa14.33□□□□□ -0.12
DDB1-204ENST00000535147 IRX6P78412 446 aaPredicted RBP14.33□□□□□ -0.12
DDB1-204ENST00000535147 HSPA5P11021 654 aaKnown RBP14.32□□□□□ -0.12
DDB1-204ENST00000535147 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
DDB1-204ENST00000535147 WASHC2AQ641Q2 1341 aa14.32□□□□□ -0.12
DDB1-204ENST00000535147 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
DDB1-204ENST00000535147 ARID3CA6NKF2 412 aa14.3□□□□□ -0.12
DDB1-204ENST00000535147 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
DDB1-204ENST00000535147 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
DDB1-204ENST00000535147 SUPT6HQ7KZ85 1726 aaKnown RBP14.29□□□□□ -0.12
DDB1-204ENST00000535147 FOXD1Q16676 465 aa14.28□□□□□ -0.12
DDB1-204ENST00000535147 DENND4BO75064 1496 aaPredicted RBP14.28□□□□□ -0.12
DDB1-204ENST00000535147 EHBP1L1Q8N3D4 1523 aa14.27□□□□□ -0.12
DDB1-204ENST00000535147 CCDC184Q52MB2 194 aa14.27□□□□□ -0.12
DDB1-204ENST00000535147 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.13
DDB1-204ENST00000535147 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
DDB1-204ENST00000535147 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDB1-204ENST00000535147 KDM6BO15054 1643 aa14.24□□□□□ -0.13
DDB1-204ENST00000535147 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
DDB1-204ENST00000535147 MPHOSPH9Q99550 1183 aa14.24□□□□□ -0.13
DDB1-204ENST00000535147 C11orf95C9JLR9 678 aaPredicted RBP14.23□□□□□ -0.13
DDB1-204ENST00000535147 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
DDB1-204ENST00000535147 THOC2Q8NI27 1593 aaKnown RBP14.23□□□□□ -0.13
DDB1-204ENST00000535147 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
DDB1-204ENST00000535147 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
DDB1-204ENST00000535147 TCOF1Q13428 1488 aaKnown RBP14.19□□□□□ -0.14
DDB1-204ENST00000535147 CDK13Q14004 1512 aaKnown RBP14.19□□□□□ -0.14
DDB1-204ENST00000535147 MSH5O43196 834 aa14.19□□□□□ -0.14
DDB1-204ENST00000535147 FAM9BQ8IZU0 186 aa14.19□□□□□ -0.14
DDB1-204ENST00000535147 HECW1Q76N89 1606 aa14.18□□□□□ -0.14
DDB1-204ENST00000535147 CNTLNQ9NXG0 1405 aa14.18□□□□□ -0.14
DDB1-204ENST00000535147 EPRSP07814 1512 aaKnown RBP14.18□□□□□ -0.14
DDB1-204ENST00000535147 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
DDB1-204ENST00000535147 NBPF8Q3BBV2 869 aa14.17□□□□□ -0.14
DDB1-204ENST00000535147 PRKRIP1Q9H875 184 aaPredicted RBP14.17□□□□□ -0.14
DDB1-204ENST00000535147 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms