RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 UBTFP17480 764 aaKnown RBP10.36□□□□□ -0.75
NPIPA1-204ENST00000534720 CEP162Q5TB80 1403 aa10.36□□□□□ -0.75
NPIPA1-204ENST00000534720 MRC2Q9UBG0 1479 aa10.35□□□□□ -0.75
NPIPA1-204ENST00000534720 RAD54L2Q9Y4B4 1467 aa10.35□□□□□ -0.75
NPIPA1-204ENST00000534720 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
NPIPA1-204ENST00000534720 IGF1RP08069 1367 aa10.32□□□□□ -0.76
NPIPA1-204ENST00000534720 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
NPIPA1-204ENST00000534720 CUL7Q14999 1698 aa10.32□□□□□ -0.76
NPIPA1-204ENST00000534720 WDR62O43379 1518 aa10.32□□□□□ -0.76
NPIPA1-204ENST00000534720 THOC2Q8NI27 1593 aaKnown RBP10.29□□□□□ -0.76
NPIPA1-204ENST00000534720 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
NPIPA1-204ENST00000534720 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
NPIPA1-204ENST00000534720 CARMIL1Q5VZK9 1371 aa10.28□□□□□ -0.76
NPIPA1-204ENST00000534720 ERCC6Q03468 1493 aa10.27□□□□□ -0.77
NPIPA1-204ENST00000534720 CLIP1P30622 1438 aa10.27□□□□□ -0.77
NPIPA1-204ENST00000534720 GAPVD1Q14C86 1478 aa10.25□□□□□ -0.77
NPIPA1-204ENST00000534720 CTTNBP2Q8WZ74 1663 aa10.25□□□□□ -0.77
NPIPA1-204ENST00000534720 IFT140Q96RY7 1462 aa10.24□□□□□ -0.77
NPIPA1-204ENST00000534720 TRIM26Q12899 539 aaPredicted RBP10.23□□□□□ -0.77
NPIPA1-204ENST00000534720 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
NPIPA1-204ENST00000534720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.21□□□□□ -0.78
NPIPA1-204ENST00000534720 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.78
NPIPA1-204ENST00000534720 HNRNPUL2Q1KMD3 747 aaKnown RBP10.21□□□□□ -0.78
NPIPA1-204ENST00000534720 PCGF6Q9BYE7 350 aa10.2□□□□□ -0.78
NPIPA1-204ENST00000534720 VPS8Q8N3P4 1428 aa10.2□□□□□ -0.78
NPIPA1-204ENST00000534720 ARAP1Q96P48 1450 aa10.18□□□□□ -0.78
NPIPA1-204ENST00000534720 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
NPIPA1-204ENST00000534720 EIF4G3O43432 1585 aaKnown RBP10.17□□□□□ -0.78
NPIPA1-204ENST00000534720 ADAMTS12P58397 1594 aa10.17□□□□□ -0.78
NPIPA1-204ENST00000534720 GRIN2BQ13224 1484 aa10.17□□□□□ -0.78
NPIPA1-204ENST00000534720 ARHGAP35Q9NRY4 1499 aa10.17□□□□□ -0.78
NPIPA1-204ENST00000534720 AQRO60306 1485 aaKnown RBP eCLIP10.16□□□□□ -0.78
NPIPA1-204ENST00000534720 ZNF608Q9ULD9 1512 aaPredicted RBP10.16□□□□□ -0.78
NPIPA1-204ENST00000534720 FHAD1B1AJZ9 1412 aa10.15□□□□□ -0.79
NPIPA1-204ENST00000534720 RANGAP1P46060 587 aaPredicted RBP10.14□□□□□ -0.79
NPIPA1-204ENST00000534720 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
NPIPA1-204ENST00000534720 EFCAB5A4FU69 1503 aa10.13□□□□□ -0.79
NPIPA1-204ENST00000534720 PPARGC1BQ86YN6 1023 aaKnown RBP10.11□□□□□ -0.79
NPIPA1-204ENST00000534720 SAMD9Q5K651 1589 aa10.1□□□□□ -0.79
NPIPA1-204ENST00000534720 SNAPC4Q5SXM2 1469 aa10.09□□□□□ -0.79
NPIPA1-204ENST00000534720 MAGI1Q96QZ7 1491 aaPredicted RBP10.09□□□□□ -0.79
NPIPA1-204ENST00000534720 APLP2Q06481 763 aa10.08□□□□□ -0.8
NPIPA1-204ENST00000534720 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
NPIPA1-204ENST00000534720 IQGAP2Q13576 1575 aa10.07□□□□□ -0.8
NPIPA1-204ENST00000534720 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
NPIPA1-204ENST00000534720 MAP3K1Q13233 1512 aa10.05□□□□□ -0.8
NPIPA1-204ENST00000534720 GRIN2AQ12879 1464 aa10.05□□□□□ -0.8
NPIPA1-204ENST00000534720 CFAP43Q8NDM7 1665 aa10.04□□□□□ -0.8
NPIPA1-204ENST00000534720 PCF11O94913 1555 aaKnown RBP10.04□□□□□ -0.8
NPIPA1-204ENST00000534720 SYNJ2O15056 1496 aa10.04□□□□□ -0.8
NPIPA1-204ENST00000534720 C1QBPQ07021 282 aaKnown RBP10.03□□□□□ -0.8
NPIPA1-204ENST00000534720 FHOD3Q2V2M9 1422 aa10.03□□□□□ -0.8
NPIPA1-204ENST00000534720 TIAM1Q13009 1591 aa10.03□□□□□ -0.8
NPIPA1-204ENST00000534720 UGGT2Q9NYU1 1516 aa10.02□□□□□ -0.81
NPIPA1-204ENST00000534720 FYCO1Q9BQS8 1478 aa10.01□□□□□ -0.81
NPIPA1-204ENST00000534720 KIAA0586Q9BVV6 1533 aa10.01□□□□□ -0.81
NPIPA1-204ENST00000534720 FMN1Q68DA7 1419 aa10.01□□□□□ -0.81
NPIPA1-204ENST00000534720 TTBK1Q5TCY1 1321 aaPredicted RBP10.01□□□□□ -0.81
NPIPA1-204ENST00000534720 CASKIN1Q8WXD9 1431 aa10□□□□□ -0.81
NPIPA1-204ENST00000534720 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
NPIPA1-204ENST00000534720 P3H3Q8IVL6 736 aa9.99□□□□□ -0.81
NPIPA1-204ENST00000534720 CEP170Q5SW79 1584 aa9.99□□□□□ -0.81
NPIPA1-204ENST00000534720 CHD1O14646 1710 aa9.98□□□□□ -0.81
NPIPA1-204ENST00000534720 HRCP23327 699 aa9.97□□□□□ -0.81
NPIPA1-204ENST00000534720 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
NPIPA1-204ENST00000534720 NUP160Q12769 1436 aa9.97□□□□□ -0.81
NPIPA1-204ENST00000534720 KIAA0556O60303 1618 aa9.97□□□□□ -0.81
NPIPA1-204ENST00000534720 KANK4Q5T7N3 995 aaPredicted RBP9.96□□□□□ -0.81
NPIPA1-204ENST00000534720 LRRC9Q6ZRR7 1453 aa9.95□□□□□ -0.82
NPIPA1-204ENST00000534720 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
NPIPA1-204ENST00000534720 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
NPIPA1-204ENST00000534720 HECW1Q76N89 1606 aa9.94□□□□□ -0.82
NPIPA1-204ENST00000534720 FBLN2P98095 1184 aa9.92□□□□□ -0.82
NPIPA1-204ENST00000534720 RRBP1Q9P2E9 1410 aaKnown RBP9.91□□□□□ -0.82
NPIPA1-204ENST00000534720 CCDC18Q5T9S5 1454 aa9.9□□□□□ -0.82
NPIPA1-204ENST00000534720 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
NPIPA1-204ENST00000534720 ATP1B4Q9UN42 357 aaPredicted RBP9.9□□□□□ -0.83
NPIPA1-204ENST00000534720 RAPGEF6Q8TEU7 1601 aa9.89□□□□□ -0.83
NPIPA1-204ENST00000534720 CAPN15O75808 1086 aa9.89□□□□□ -0.83
NPIPA1-204ENST00000534720 SUPT6HQ7KZ85 1726 aaKnown RBP9.88□□□□□ -0.83
NPIPA1-204ENST00000534720 CARMIL2Q6F5E8 1435 aa9.88□□□□□ -0.83
NPIPA1-204ENST00000534720 TRHP20396 242 aaPredicted RBP9.88□□□□□ -0.83
NPIPA1-204ENST00000534720 SHROOM2Q13796 1616 aa9.87□□□□□ -0.83
NPIPA1-204ENST00000534720 EHBP1L1Q8N3D4 1523 aa9.87□□□□□ -0.83
NPIPA1-204ENST00000534720 JPH4Q96JJ6 628 aa9.87□□□□□ -0.83
NPIPA1-204ENST00000534720 EPRSP07814 1512 aaKnown RBP9.86□□□□□ -0.83
NPIPA1-204ENST00000534720 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
NPIPA1-204ENST00000534720 CCNB3Q8WWL7 1395 aa9.85□□□□□ -0.83
NPIPA1-204ENST00000534720 MTUS2Q5JR59 1369 aa9.84□□□□□ -0.83
NPIPA1-204ENST00000534720 PHLDB1Q86UU1 1377 aa9.84□□□□□ -0.83
NPIPA1-204ENST00000534720 CDK13Q14004 1512 aaKnown RBP9.83□□□□□ -0.84
NPIPA1-204ENST00000534720 MAGI3Q5TCQ9 1506 aa9.83□□□□□ -0.84
NPIPA1-204ENST00000534720 NUP153P49790 1475 aaKnown RBP9.82□□□□□ -0.84
NPIPA1-204ENST00000534720 ARHGEF11O15085 1522 aa9.82□□□□□ -0.84
NPIPA1-204ENST00000534720 CLASP1Q7Z460 1538 aa9.82□□□□□ -0.84
NPIPA1-204ENST00000534720 ABCA8O94911 1581 aa9.82□□□□□ -0.84
NPIPA1-204ENST00000534720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.81□□□□□ -0.84
NPIPA1-204ENST00000534720 PRG4Q92954 1404 aaPredicted RBP9.81□□□□□ -0.84
NPIPA1-204ENST00000534720 NCOA2Q15596 1464 aa9.81□□□□□ -0.84
NPIPA1-204ENST00000534720 PLB1Q6P1J6 1458 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms