RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-204ENST00000534720 AEBP2Q6ZN18 517 aaPredicted RBP16.4■□□□□ 0.22
NPIPA1-204ENST00000534720 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
NPIPA1-204ENST00000534720 NISCHQ9Y2I1 1504 aa14.67□□□□□ -0.06
NPIPA1-204ENST00000534720 PHF23Q9BUL5 403 aaPredicted RBP14.24□□□□□ -0.13
NPIPA1-204ENST00000534720 SENP3Q9H4L4 574 aaPredicted RBP13.89□□□□□ -0.19
NPIPA1-204ENST00000534720 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
NPIPA1-204ENST00000534720 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.3
NPIPA1-204ENST00000534720 FOXD1Q16676 465 aa12.87□□□□□ -0.35
NPIPA1-204ENST00000534720 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
NPIPA1-204ENST00000534720 PPP6R1Q9UPN7 881 aa12.51□□□□□ -0.41
NPIPA1-204ENST00000534720 ADRA2BP18089 450 aa12.49□□□□□ -0.41
NPIPA1-204ENST00000534720 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
NPIPA1-204ENST00000534720 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
NPIPA1-204ENST00000534720 DCAF1Q9Y4B6 1507 aa12.16□□□□□ -0.46
NPIPA1-204ENST00000534720 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
NPIPA1-204ENST00000534720 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
NPIPA1-204ENST00000534720 ABCC9O60706 1549 aa11.98□□□□□ -0.49
NPIPA1-204ENST00000534720 MSH5O43196 834 aa11.95□□□□□ -0.5
NPIPA1-204ENST00000534720 SHROOM4Q9ULL8 1493 aa11.93□□□□□ -0.5
NPIPA1-204ENST00000534720 NACADO15069 1562 aa11.9□□□□□ -0.5
NPIPA1-204ENST00000534720 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
NPIPA1-204ENST00000534720 SCRIBQ14160 1630 aa11.75□□□□□ -0.53
NPIPA1-204ENST00000534720 PPP4R3CPQ6ZMV5 832 aa11.64□□□□□ -0.55
NPIPA1-204ENST00000534720 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
NPIPA1-204ENST00000534720 KCNA4P22459 653 aa11.56□□□□□ -0.56
NPIPA1-204ENST00000534720 SUPT5HO00267 1087 aaKnown RBP11.51□□□□□ -0.57
NPIPA1-204ENST00000534720 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
NPIPA1-204ENST00000534720 BICRAQ9NZM4 1560 aa11.43□□□□□ -0.58
NPIPA1-204ENST00000534720 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
NPIPA1-204ENST00000534720 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
NPIPA1-204ENST00000534720 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
NPIPA1-204ENST00000534720 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.59
NPIPA1-204ENST00000534720 MROH2BQ7Z745 1585 aa11.32□□□□□ -0.6
NPIPA1-204ENST00000534720 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
NPIPA1-204ENST00000534720 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
NPIPA1-204ENST00000534720 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
NPIPA1-204ENST00000534720 WIZO95785 1651 aa11.27□□□□□ -0.6
NPIPA1-204ENST00000534720 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.6
NPIPA1-204ENST00000534720 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
NPIPA1-204ENST00000534720 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
NPIPA1-204ENST00000534720 TOP2AP11388 1531 aaKnown RBP11.15□□□□□ -0.62
NPIPA1-204ENST00000534720 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
NPIPA1-204ENST00000534720 SMARCA2P51531 1590 aa11.08□□□□□ -0.64
NPIPA1-204ENST00000534720 EIF4G1Q04637 1599 aaKnown RBP11.07□□□□□ -0.64
NPIPA1-204ENST00000534720 ATAD2BQ9ULI0 1458 aa11.05□□□□□ -0.64
NPIPA1-204ENST00000534720 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
NPIPA1-204ENST00000534720 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
NPIPA1-204ENST00000534720 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
NPIPA1-204ENST00000534720 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
NPIPA1-204ENST00000534720 HMGXB3Q12766 1538 aa10.98□□□□□ -0.65
NPIPA1-204ENST00000534720 HOXD11P31277 338 aaPredicted RBP10.96□□□□□ -0.66
NPIPA1-204ENST00000534720 NCAPD3P42695 1498 aa10.95□□□□□ -0.66
NPIPA1-204ENST00000534720 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
NPIPA1-204ENST00000534720 CC2D2AQ9P2K1 1620 aa10.9□□□□□ -0.66
NPIPA1-204ENST00000534720 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.67
NPIPA1-204ENST00000534720 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.67
NPIPA1-204ENST00000534720 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
NPIPA1-204ENST00000534720 PRDM2Q13029 1718 aa10.81□□□□□ -0.68
NPIPA1-204ENST00000534720 ABCC8Q09428 1581 aa10.8□□□□□ -0.68
NPIPA1-204ENST00000534720 CFTRP13569 1480 aa10.72□□□□□ -0.69
NPIPA1-204ENST00000534720 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
NPIPA1-204ENST00000534720 WRNQ14191 1432 aaPredicted RBP eCLIP10.71□□□□□ -0.7
NPIPA1-204ENST00000534720 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
NPIPA1-204ENST00000534720 BIVM-ERCC5R4GMW8 1640 aa10.68□□□□□ -0.7
NPIPA1-204ENST00000534720 TOP2BQ02880 1626 aa10.66□□□□□ -0.7
NPIPA1-204ENST00000534720 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
NPIPA1-204ENST00000534720 ZBTB22O15209 634 aa10.64□□□□□ -0.71
NPIPA1-204ENST00000534720 LOC105371045A0A1W2PR82 267 aa10.63□□□□□ -0.71
NPIPA1-204ENST00000534720 EEA1Q15075 1411 aa10.61□□□□□ -0.71
NPIPA1-204ENST00000534720 LAMC3Q9Y6N6 1575 aa10.61□□□□□ -0.71
NPIPA1-204ENST00000534720 FAM9AQ8IZU1 332 aaPredicted RBP10.61□□□□□ -0.71
NPIPA1-204ENST00000534720 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
NPIPA1-204ENST00000534720 FOXD4L1Q9NU39 408 aa10.6□□□□□ -0.71
NPIPA1-204ENST00000534720 CUX1P39880 1505 aa10.59□□□□□ -0.71
NPIPA1-204ENST00000534720 SOGA1O94964 1423 aa10.58□□□□□ -0.72
NPIPA1-204ENST00000534720 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
NPIPA1-204ENST00000534720 FANCD2Q9BXW9 1451 aa10.55□□□□□ -0.72
NPIPA1-204ENST00000534720 NESP48681 1621 aa10.54□□□□□ -0.72
NPIPA1-204ENST00000534720 RUSC2Q8N2Y8 1516 aa10.54□□□□□ -0.72
NPIPA1-204ENST00000534720 KIF21AQ7Z4S6 1674 aa10.51□□□□□ -0.73
NPIPA1-204ENST00000534720 DNMBPQ6XZF7 1577 aa10.5□□□□□ -0.73
NPIPA1-204ENST00000534720 KIF21BO75037 1637 aa10.5□□□□□ -0.73
NPIPA1-204ENST00000534720 CEP164Q9UPV0 1460 aa10.49□□□□□ -0.73
NPIPA1-204ENST00000534720 PDS5BQ9NTI5 1447 aa10.48□□□□□ -0.73
NPIPA1-204ENST00000534720 TOPBP1Q92547 1522 aa10.46□□□□□ -0.73
NPIPA1-204ENST00000534720 FGD5Q6ZNL6 1462 aa10.46□□□□□ -0.73
NPIPA1-204ENST00000534720 GOLGA3Q08378 1498 aa10.45□□□□□ -0.74
NPIPA1-204ENST00000534720 KIF27Q86VH2 1401 aa10.44□□□□□ -0.74
NPIPA1-204ENST00000534720 TNIKQ9UKE5 1360 aa10.43□□□□□ -0.74
NPIPA1-204ENST00000534720 URB2Q14146 1524 aaKnown RBP10.42□□□□□ -0.74
NPIPA1-204ENST00000534720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.41□□□□□ -0.74
NPIPA1-204ENST00000534720 ERICH3Q5RHP9 1530 aa10.41□□□□□ -0.74
NPIPA1-204ENST00000534720 WDR97A6NE52 1622 aa10.41□□□□□ -0.74
NPIPA1-204ENST00000534720 POLA1P09884 1462 aaPredicted RBP10.4□□□□□ -0.74
NPIPA1-204ENST00000534720 POTEHQ6S545 545 aa10.39□□□□□ -0.75
NPIPA1-204ENST00000534720 CUX2O14529 1486 aa10.39□□□□□ -0.75
NPIPA1-204ENST00000534720 PRXQ9BXM0 1461 aa10.39□□□□□ -0.75
NPIPA1-204ENST00000534720 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
NPIPA1-204ENST00000534720 RAPGEF2Q9Y4G8 1499 aa10.37□□□□□ -0.75
NPIPA1-204ENST00000534720 MYCNP04198 464 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms