RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 TIAM1Q13009 1591 aa24.98■■□□□ 1.59
SIPA1-209ENST00000534313 LRRC9Q6ZRR7 1453 aa24.94■■□□□ 1.58
SIPA1-209ENST00000534313 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
SIPA1-209ENST00000534313 FANCD2Q9BXW9 1451 aa24.93■■□□□ 1.58
SIPA1-209ENST00000534313 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
SIPA1-209ENST00000534313 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
SIPA1-209ENST00000534313 SETD5Q9C0A6 1442 aa24.9■■□□□ 1.58
SIPA1-209ENST00000534313 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
SIPA1-209ENST00000534313 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.57
SIPA1-209ENST00000534313 MAPKBP1O60336 1514 aa24.89■■□□□ 1.57
SIPA1-209ENST00000534313 NESP48681 1621 aa24.88■■□□□ 1.57
SIPA1-209ENST00000534313 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
SIPA1-209ENST00000534313 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
SIPA1-209ENST00000534313 DDX10Q13206 875 aaKnown RBP24.82■■□□□ 1.56
SIPA1-209ENST00000534313 POLA1P09884 1462 aaPredicted RBP24.78■■□□□ 1.56
SIPA1-209ENST00000534313 MAP3K1Q13233 1512 aa24.78■■□□□ 1.56
SIPA1-209ENST00000534313 SUPT16HQ9Y5B9 1047 aaKnown RBP24.75■■□□□ 1.55
SIPA1-209ENST00000534313 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
SIPA1-209ENST00000534313 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
SIPA1-209ENST00000534313 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
SIPA1-209ENST00000534313 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
SIPA1-209ENST00000534313 ABCA10Q8WWZ4 1543 aa24.69■■□□□ 1.54
SIPA1-209ENST00000534313 DNAJC5BQ9UF47 199 aa24.67■■□□□ 1.54
SIPA1-209ENST00000534313 CFAP43Q8NDM7 1665 aa24.65■■□□□ 1.54
SIPA1-209ENST00000534313 MTUS2Q5JR59 1369 aa24.64■■□□□ 1.53
SIPA1-209ENST00000534313 CASKIN1Q8WXD9 1431 aa24.64■■□□□ 1.53
SIPA1-209ENST00000534313 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
SIPA1-209ENST00000534313 BCANQ96GW7 911 aa24.59■■□□□ 1.53
SIPA1-209ENST00000534313 PPP1R15AO75807 674 aaPredicted RBP24.59■■□□□ 1.53
SIPA1-209ENST00000534313 ARID3CA6NKF2 412 aa24.58■■□□□ 1.53
SIPA1-209ENST00000534313 FGD6Q6ZV73 1430 aa24.57■■□□□ 1.52
SIPA1-209ENST00000534313 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
SIPA1-209ENST00000534313 EFCAB5A4FU69 1503 aa24.55■■□□□ 1.52
SIPA1-209ENST00000534313 PTPRKQ15262 1439 aa24.54■■□□□ 1.52
SIPA1-209ENST00000534313 FMN1Q68DA7 1419 aa24.54■■□□□ 1.52
SIPA1-209ENST00000534313 CHIC2Q9UKJ5 165 aa24.53■■□□□ 1.52
SIPA1-209ENST00000534313 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
SIPA1-209ENST00000534313 TRIM52Q96A61 297 aa24.5■■□□□ 1.51
SIPA1-209ENST00000534313 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
SIPA1-209ENST00000534313 RRP7BPQ9NSQ0 103 aa24.49■■□□□ 1.51
SIPA1-209ENST00000534313 CUL7Q14999 1698 aa24.49■■□□□ 1.51
SIPA1-209ENST00000534313 CTTNBP2Q8WZ74 1663 aa24.48■■□□□ 1.51
SIPA1-209ENST00000534313 AQRO60306 1485 aaKnown RBP eCLIP24.48■■□□□ 1.513e-6■■■■■ 26.9
SIPA1-209ENST00000534313 CCDC18Q5T9S5 1454 aa24.48■■□□□ 1.51
SIPA1-209ENST00000534313 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
SIPA1-209ENST00000534313 TIMELESSQ9UNS1 1208 aa24.44■■□□□ 1.5
SIPA1-209ENST00000534313 NCOA2Q15596 1464 aa24.43■■□□□ 1.5
SIPA1-209ENST00000534313 ANP32CO43423 234 aa24.43■■□□□ 1.5
SIPA1-209ENST00000534313 FKBP8Q14318 412 aa24.42■■□□□ 1.5
SIPA1-209ENST00000534313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.42■■□□□ 1.5
SIPA1-209ENST00000534313 HFM1A2PYH4 1435 aa24.37■■□□□ 1.49
SIPA1-209ENST00000534313 MYOM3Q5VTT5 1437 aa24.37■■□□□ 1.49
SIPA1-209ENST00000534313 NAIPQ13075 1403 aa24.36■■□□□ 1.49
SIPA1-209ENST00000534313 TSHZ2Q9NRE2 1034 aa24.35■■□□□ 1.49
SIPA1-209ENST00000534313 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
SIPA1-209ENST00000534313 LRRIQ1Q96JM4 1722 aa24.35■■□□□ 1.49
SIPA1-209ENST00000534313 GRIN2BQ13224 1484 aa24.34■■□□□ 1.49
SIPA1-209ENST00000534313 PTPN23Q9H3S7 1636 aa24.33■■□□□ 1.49
SIPA1-209ENST00000534313 LAMC3Q9Y6N6 1575 aa24.33■■□□□ 1.48
SIPA1-209ENST00000534313 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
SIPA1-209ENST00000534313 PDS5BQ9NTI5 1447 aa24.32■■□□□ 1.48
SIPA1-209ENST00000534313 FOXD1Q16676 465 aa24.31■■□□□ 1.48
SIPA1-209ENST00000534313 SAMD9Q5K651 1589 aa24.31■■□□□ 1.48
SIPA1-209ENST00000534313 MAGI3Q5TCQ9 1506 aa24.29■■□□□ 1.48
SIPA1-209ENST00000534313 CCER2I3L3R5 266 aa24.24■■□□□ 1.47
SIPA1-209ENST00000534313 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
SIPA1-209ENST00000534313 EHBP1L1Q8N3D4 1523 aa24.22■■□□□ 1.47
SIPA1-209ENST00000534313 NEFLP07196 543 aa24.22■■□□□ 1.47
SIPA1-209ENST00000534313 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
SIPA1-209ENST00000534313 ANP32EQ9BTT0 268 aa24.21■■□□□ 1.47
SIPA1-209ENST00000534313 CDK13Q14004 1512 aaKnown RBP24.2■■□□□ 1.46
SIPA1-209ENST00000534313 HSPA5P11021 654 aaKnown RBP24.2■■□□□ 1.46
SIPA1-209ENST00000534313 UGGT2Q9NYU1 1516 aa24.19■■□□□ 1.46
SIPA1-209ENST00000534313 MPHOSPH9Q99550 1183 aa24.15■■□□□ 1.46
SIPA1-209ENST00000534313 HNRNPUQ00839 825 aaKnown RBP eCLIP24.14■■□□□ 1.46
SIPA1-209ENST00000534313 KDM6BO15054 1643 aa24.13■■□□□ 1.45
SIPA1-209ENST00000534313 WASHC2AQ641Q2 1341 aa24.13■■□□□ 1.45
SIPA1-209ENST00000534313 ZNF644Q9H582 1327 aaPredicted RBP24.13■■□□□ 1.45
SIPA1-209ENST00000534313 EPRSP07814 1512 aaKnown RBP24.13■■□□□ 1.45
SIPA1-209ENST00000534313 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
SIPA1-209ENST00000534313 L3MBTL2Q969R5 705 aa24.12■■□□□ 1.45
SIPA1-209ENST00000534313 KDM5BQ9UGL1 1544 aa24.11■■□□□ 1.45
SIPA1-209ENST00000534313 IRX6P78412 446 aaPredicted RBP24.11■■□□□ 1.45
SIPA1-209ENST00000534313 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
SIPA1-209ENST00000534313 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
SIPA1-209ENST00000534313 ARHGEF11O15085 1522 aa24.08■■□□□ 1.45
SIPA1-209ENST00000534313 IQGAP2Q13576 1575 aa24.07■■□□□ 1.44
SIPA1-209ENST00000534313 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
SIPA1-209ENST00000534313 CNGB1Q14028 1251 aaPredicted RBP24.06■■□□□ 1.44
SIPA1-209ENST00000534313 HECW1Q76N89 1606 aa24.05■■□□□ 1.44
SIPA1-209ENST00000534313 CCDC184Q52MB2 194 aa24.05■■□□□ 1.44
SIPA1-209ENST00000534313 C11orf95C9JLR9 678 aaPredicted RBP24.05■■□□□ 1.44
SIPA1-209ENST00000534313 BCL11AQ9H165 835 aa24.04■■□□□ 1.44
SIPA1-209ENST00000534313 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
SIPA1-209ENST00000534313 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
SIPA1-209ENST00000534313 ERICH6Q7L0X2 663 aa24.02■■□□□ 1.44
SIPA1-209ENST00000534313 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
SIPA1-209ENST00000534313 NBPF8Q3BBV2 869 aa23.99■■□□□ 1.43
SIPA1-209ENST00000534313 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
SIPA1-209ENST00000534313 ZNF777Q9ULD5 760 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms