RNA–Protein interactions for RNA: ENST00000533670.1

AP003716.1-203, humanhuman

TSL 3 BASIC

Gene AP003716.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003716.1-203ENST00000533670 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
AP003716.1-203ENST00000533670 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
AP003716.1-203ENST00000533670 FBLN2P98095 1184 aa18.69■□□□□ 0.58
AP003716.1-203ENST00000533670 REM2Q8IYK8 340 aaPredicted RBP18.69■□□□□ 0.58
AP003716.1-203ENST00000533670 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
AP003716.1-203ENST00000533670 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
AP003716.1-203ENST00000533670 SPDYE2BA6NHP3 402 aa18.55■□□□□ 0.56
AP003716.1-203ENST00000533670 SPDYE6P0CI01 402 aa18.55■□□□□ 0.56
AP003716.1-203ENST00000533670 SPDYE2Q495Y8 402 aa18.55■□□□□ 0.56
AP003716.1-203ENST00000533670 POLA1P09884 1462 aaPredicted RBP18.54■□□□□ 0.56
AP003716.1-203ENST00000533670 CUX1P39880 1505 aa18.54■□□□□ 0.56
AP003716.1-203ENST00000533670 SOGA1O94964 1423 aa18.49■□□□□ 0.55
AP003716.1-203ENST00000533670 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
AP003716.1-203ENST00000533670 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
AP003716.1-203ENST00000533670 PITPNM1O00562 1244 aa18.48■□□□□ 0.55
AP003716.1-203ENST00000533670 DNAJC5Q9H3Z4 198 aa18.46■□□□□ 0.55
AP003716.1-203ENST00000533670 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
AP003716.1-203ENST00000533670 ZNF608Q9ULD9 1512 aaPredicted RBP18.44■□□□□ 0.54
AP003716.1-203ENST00000533670 PIP4P2Q8N4L2 257 aa18.44■□□□□ 0.54
AP003716.1-203ENST00000533670 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
AP003716.1-203ENST00000533670 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
AP003716.1-203ENST00000533670 TOP2BQ02880 1626 aa18.4■□□□□ 0.54
AP003716.1-203ENST00000533670 MKRN4PQ13434 485 aaPredicted RBP18.37■□□□□ 0.53
AP003716.1-203ENST00000533670 AQRO60306 1485 aaKnown RBP eCLIP18.37■□□□□ 0.533e-8■■■□□ 18.1
AP003716.1-203ENST00000533670 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
AP003716.1-203ENST00000533670 BIVM-ERCC5R4GMW8 1640 aa18.36■□□□□ 0.53
AP003716.1-203ENST00000533670 TDRD9Q8NDG6 1382 aaKnown RBP18.35■□□□□ 0.53
AP003716.1-203ENST00000533670 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
AP003716.1-203ENST00000533670 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
AP003716.1-203ENST00000533670 FXR2P51116 673 aaKnown RBP eCLIP18.33■□□□□ 0.52
AP003716.1-203ENST00000533670 SLC24A1O60721 1099 aa18.32■□□□□ 0.52
AP003716.1-203ENST00000533670 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
AP003716.1-203ENST00000533670 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
AP003716.1-203ENST00000533670 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
AP003716.1-203ENST00000533670 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
AP003716.1-203ENST00000533670 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
AP003716.1-203ENST00000533670 SPDYE1Q8NFV5 336 aaPredicted RBP18.25■□□□□ 0.51
AP003716.1-203ENST00000533670 MAGI1Q96QZ7 1491 aaPredicted RBP18.24■□□□□ 0.51
AP003716.1-203ENST00000533670 SP7Q8TDD2 431 aaPredicted RBP18.23■□□□□ 0.51
AP003716.1-203ENST00000533670 SSUH2Q9Y2M2 353 aa18.23■□□□□ 0.51
AP003716.1-203ENST00000533670 ABCA5Q8WWZ7 1642 aa18.2■□□□□ 0.5
AP003716.1-203ENST00000533670 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
AP003716.1-203ENST00000533670 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
AP003716.1-203ENST00000533670 HAX1O00165 279 aa18.18■□□□□ 0.5
AP003716.1-203ENST00000533670 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
AP003716.1-203ENST00000533670 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
AP003716.1-203ENST00000533670 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
AP003716.1-203ENST00000533670 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
AP003716.1-203ENST00000533670 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
AP003716.1-203ENST00000533670 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
AP003716.1-203ENST00000533670 IGF1RP08069 1367 aa18.06■□□□□ 0.48
AP003716.1-203ENST00000533670 PBRM1Q86U86 1689 aa18.06■□□□□ 0.48
AP003716.1-203ENST00000533670 PRKAR2AP13861 404 aaKnown RBP18.03■□□□□ 0.48
AP003716.1-203ENST00000533670 ADAMTS12P58397 1594 aa18.03■□□□□ 0.48
AP003716.1-203ENST00000533670 GRIN2AQ12879 1464 aa18.02■□□□□ 0.48
AP003716.1-203ENST00000533670 CHD1O14646 1710 aa18.01■□□□□ 0.47
AP003716.1-203ENST00000533670 NUP160Q12769 1436 aa17.98■□□□□ 0.47
AP003716.1-203ENST00000533670 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
AP003716.1-203ENST00000533670 FKBP8Q14318 412 aa17.95■□□□□ 0.46
AP003716.1-203ENST00000533670 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
AP003716.1-203ENST00000533670 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
AP003716.1-203ENST00000533670 CUL7Q14999 1698 aa17.91■□□□□ 0.46
AP003716.1-203ENST00000533670 PRR29P0C7W0 189 aa17.9■□□□□ 0.46
AP003716.1-203ENST00000533670 CEP170Q5SW79 1584 aa17.86■□□□□ 0.45
AP003716.1-203ENST00000533670 RUSC2Q8N2Y8 1516 aa17.85■□□□□ 0.45
AP003716.1-203ENST00000533670 RIMBP3CA6NJZ7 1639 aa17.84■□□□□ 0.45
AP003716.1-203ENST00000533670 RIMBP3BA6NNM3 1639 aa17.84■□□□□ 0.45
AP003716.1-203ENST00000533670 RIMBP3Q9UFD9 1639 aa17.84■□□□□ 0.45
AP003716.1-203ENST00000533670 EEA1Q15075 1411 aa17.84■□□□□ 0.45
AP003716.1-203ENST00000533670 KIAA0586Q9BVV6 1533 aa17.82■□□□□ 0.44
AP003716.1-203ENST00000533670 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
AP003716.1-203ENST00000533670 JPH4Q96JJ6 628 aa17.81■□□□□ 0.44
AP003716.1-203ENST00000533670 EVX2Q03828 476 aa17.79■□□□□ 0.44
AP003716.1-203ENST00000533670 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
AP003716.1-203ENST00000533670 CHADLQ6NUI6 762 aa17.77■□□□□ 0.44
AP003716.1-203ENST00000533670 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
AP003716.1-203ENST00000533670 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
AP003716.1-203ENST00000533670 CYB5RLQ6IPT4 315 aa17.76■□□□□ 0.43
AP003716.1-203ENST00000533670 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
AP003716.1-203ENST00000533670 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
AP003716.1-203ENST00000533670 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
AP003716.1-203ENST00000533670 ERCC6L2Q5T890 1561 aa17.64■□□□□ 0.41
AP003716.1-203ENST00000533670 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.41
AP003716.1-203ENST00000533670 UGGT2Q9NYU1 1516 aa17.61■□□□□ 0.41
AP003716.1-203ENST00000533670 STAG3Q9UJ98 1225 aa17.6■□□□□ 0.41
AP003716.1-203ENST00000533670 SPDYE4A6NLX3 237 aa17.59■□□□□ 0.41
AP003716.1-203ENST00000533670 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
AP003716.1-203ENST00000533670 FAM9AQ8IZU1 332 aaPredicted RBP17.57■□□□□ 0.4
AP003716.1-203ENST00000533670 FARP1Q9Y4F1 1045 aaPredicted RBP17.55■□□□□ 0.4
AP003716.1-203ENST00000533670 DISP1Q96F81 1524 aa17.55■□□□□ 0.4
AP003716.1-203ENST00000533670 PTPRGP23470 1445 aa17.55■□□□□ 0.4
AP003716.1-203ENST00000533670 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
AP003716.1-203ENST00000533670 KIF21BO75037 1637 aa17.54■□□□□ 0.4
AP003716.1-203ENST00000533670 GABBR2O75899 941 aa17.49■□□□□ 0.39
AP003716.1-203ENST00000533670 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
AP003716.1-203ENST00000533670 CD44P16070 742 aaKnown RBP17.47■□□□□ 0.39
AP003716.1-203ENST00000533670 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
AP003716.1-203ENST00000533670 NPM1P06748 294 aaKnown RBP eCLIP17.45■□□□□ 0.38
AP003716.1-203ENST00000533670 UHRF1BP1LA0JNW5 1464 aa17.44■□□□□ 0.38
AP003716.1-203ENST00000533670 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms