RNA–Protein interactions for RNA: ENST00000533336.1

FNTA-210, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-210ENST00000533336 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
FNTA-210ENST00000533336 MRC2Q9UBG0 1479 aa12.12□□□□□ -0.47
FNTA-210ENST00000533336 WDR62O43379 1518 aa12.11□□□□□ -0.47
FNTA-210ENST00000533336 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
FNTA-210ENST00000533336 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
FNTA-210ENST00000533336 THOC2Q8NI27 1593 aaKnown RBP12.11□□□□□ -0.47
FNTA-210ENST00000533336 LHX8Q68G74 356 aa12.11□□□□□ -0.47
FNTA-210ENST00000533336 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
FNTA-210ENST00000533336 SLC4A1APQ9BWU0 796 aaKnown RBP12.08□□□□□ -0.48
FNTA-210ENST00000533336 EEA1Q15075 1411 aa12.06□□□□□ -0.48
FNTA-210ENST00000533336 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
FNTA-210ENST00000533336 FGD5Q6ZNL6 1462 aa12.06□□□□□ -0.48
FNTA-210ENST00000533336 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
FNTA-210ENST00000533336 ERCC6Q03468 1493 aa12.04□□□□□ -0.48
FNTA-210ENST00000533336 ABCA10Q8WWZ4 1543 aa12.01□□□□□ -0.49
FNTA-210ENST00000533336 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
FNTA-210ENST00000533336 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
FNTA-210ENST00000533336 CUX2O14529 1486 aa11.97□□□□□ -0.49
FNTA-210ENST00000533336 SOGA1O94964 1423 aa11.96□□□□□ -0.49
FNTA-210ENST00000533336 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
FNTA-210ENST00000533336 ATF5Q9Y2D1 282 aaPredicted RBP11.95□□□□□ -0.5
FNTA-210ENST00000533336 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
FNTA-210ENST00000533336 KIF27Q86VH2 1401 aa11.94□□□□□ -0.5
FNTA-210ENST00000533336 GABBR2O75899 941 aa11.94□□□□□ -0.5
FNTA-210ENST00000533336 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
FNTA-210ENST00000533336 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
FNTA-210ENST00000533336 KIF21BO75037 1637 aa11.92□□□□□ -0.5
FNTA-210ENST00000533336 RAD54L2Q9Y4B4 1467 aa11.91□□□□□ -0.5
FNTA-210ENST00000533336 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
FNTA-210ENST00000533336 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
FNTA-210ENST00000533336 ERICH3Q5RHP9 1530 aa11.89□□□□□ -0.51
FNTA-210ENST00000533336 PRXQ9BXM0 1461 aa11.89□□□□□ -0.51
FNTA-210ENST00000533336 CUL7Q14999 1698 aa11.87□□□□□ -0.51
FNTA-210ENST00000533336 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
FNTA-210ENST00000533336 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
FNTA-210ENST00000533336 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
FNTA-210ENST00000533336 GOLGA3Q08378 1498 aa11.83□□□□□ -0.52
FNTA-210ENST00000533336 IGF1RP08069 1367 aa11.81□□□□□ -0.52
FNTA-210ENST00000533336 ADAMTS12P58397 1594 aa11.81□□□□□ -0.52
FNTA-210ENST00000533336 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
FNTA-210ENST00000533336 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
FNTA-210ENST00000533336 ZNF608Q9ULD9 1512 aaPredicted RBP11.81□□□□□ -0.52
FNTA-210ENST00000533336 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
FNTA-210ENST00000533336 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
FNTA-210ENST00000533336 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
FNTA-210ENST00000533336 SPDYE2Q495Y8 402 aa11.78□□□□□ -0.52
FNTA-210ENST00000533336 TDRD9Q8NDG6 1382 aaKnown RBP11.78□□□□□ -0.52
FNTA-210ENST00000533336 MAGI1Q96QZ7 1491 aaPredicted RBP11.77□□□□□ -0.52
FNTA-210ENST00000533336 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
FNTA-210ENST00000533336 RAPGEF2Q9Y4G8 1499 aa11.76□□□□□ -0.53
FNTA-210ENST00000533336 AQRO60306 1485 aaKnown RBP eCLIP11.75□□□□□ -0.539e-7■■■□□ 18.2
FNTA-210ENST00000533336 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
FNTA-210ENST00000533336 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
FNTA-210ENST00000533336 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
FNTA-210ENST00000533336 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
FNTA-210ENST00000533336 SNAPC4Q5SXM2 1469 aa11.72□□□□□ -0.53
FNTA-210ENST00000533336 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
FNTA-210ENST00000533336 ZBTB22O15209 634 aa11.68□□□□□ -0.54
FNTA-210ENST00000533336 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
FNTA-210ENST00000533336 CTTNBP2Q8WZ74 1663 aa11.68□□□□□ -0.54
FNTA-210ENST00000533336 GRIN2AQ12879 1464 aa11.67□□□□□ -0.54
FNTA-210ENST00000533336 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
FNTA-210ENST00000533336 CEP162Q5TB80 1403 aa11.65□□□□□ -0.54
FNTA-210ENST00000533336 NUP160Q12769 1436 aa11.64□□□□□ -0.55
FNTA-210ENST00000533336 LOC105371045A0A1W2PR82 267 aa11.63□□□□□ -0.55
FNTA-210ENST00000533336 FBLN2P98095 1184 aa11.62□□□□□ -0.55
FNTA-210ENST00000533336 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
FNTA-210ENST00000533336 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
FNTA-210ENST00000533336 IQGAP2Q13576 1575 aa11.6□□□□□ -0.55
FNTA-210ENST00000533336 SAMD9Q5K651 1589 aa11.59□□□□□ -0.55
FNTA-210ENST00000533336 CEP170Q5SW79 1584 aa11.59□□□□□ -0.55
FNTA-210ENST00000533336 KIAA0586Q9BVV6 1533 aa11.59□□□□□ -0.55
FNTA-210ENST00000533336 UGGT2Q9NYU1 1516 aa11.58□□□□□ -0.56
FNTA-210ENST00000533336 CLIP1P30622 1438 aa11.58□□□□□ -0.56
FNTA-210ENST00000533336 CHD1O14646 1710 aa11.57□□□□□ -0.56
FNTA-210ENST00000533336 CLCN6P51797 869 aa11.56□□□□□ -0.56
FNTA-210ENST00000533336 ARHGAP35Q9NRY4 1499 aa11.56□□□□□ -0.56
FNTA-210ENST00000533336 UBTFP17480 764 aaKnown RBP11.55□□□□□ -0.56
FNTA-210ENST00000533336 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
FNTA-210ENST00000533336 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
FNTA-210ENST00000533336 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
FNTA-210ENST00000533336 SHROOM2Q13796 1616 aa11.52□□□□□ -0.57
FNTA-210ENST00000533336 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
FNTA-210ENST00000533336 VPS8Q8N3P4 1428 aa11.51□□□□□ -0.57
FNTA-210ENST00000533336 PRR29P0C7W0 189 aa11.5□□□□□ -0.57
FNTA-210ENST00000533336 CD44P16070 742 aaKnown RBP11.5□□□□□ -0.57
FNTA-210ENST00000533336 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
FNTA-210ENST00000533336 KIAA0556O60303 1618 aa11.49□□□□□ -0.57
FNTA-210ENST00000533336 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
FNTA-210ENST00000533336 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
FNTA-210ENST00000533336 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
FNTA-210ENST00000533336 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
FNTA-210ENST00000533336 POTEMA6NI47 508 aa11.43□□□□□ -0.58
FNTA-210ENST00000533336 PCF11O94913 1555 aaKnown RBP11.42□□□□□ -0.58
FNTA-210ENST00000533336 MAP3K1Q13233 1512 aa11.42□□□□□ -0.58
FNTA-210ENST00000533336 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
FNTA-210ENST00000533336 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
FNTA-210ENST00000533336 CASKIN1Q8WXD9 1431 aa11.4□□□□□ -0.58
FNTA-210ENST00000533336 CFAP43Q8NDM7 1665 aa11.4□□□□□ -0.59
FNTA-210ENST00000533336 CARMIL2Q6F5E8 1435 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms