RNA–Protein interactions for RNA: ENST00000533336.1

FNTA-210, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-210ENST00000533336 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
FNTA-210ENST00000533336 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
FNTA-210ENST00000533336 SENP3Q9H4L4 574 aaPredicted RBP19.47■□□□□ 0.71
FNTA-210ENST00000533336 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
FNTA-210ENST00000533336 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
FNTA-210ENST00000533336 FOXD1Q16676 465 aa18.2■□□□□ 0.5
FNTA-210ENST00000533336 MSH5O43196 834 aa17.39■□□□□ 0.37
FNTA-210ENST00000533336 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
FNTA-210ENST00000533336 PIAS4Q8N2W9 510 aaPredicted RBP16.85■□□□□ 0.29
FNTA-210ENST00000533336 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
FNTA-210ENST00000533336 ADRA2BP18089 450 aa16.32■□□□□ 0.2
FNTA-210ENST00000533336 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
FNTA-210ENST00000533336 CACNB1Q02641 598 aaPredicted RBP15.38■□□□□ 0.05
FNTA-210ENST00000533336 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
FNTA-210ENST00000533336 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
FNTA-210ENST00000533336 SCAF1Q9H7N4 1312 aaKnown RBP15.03■□□□□ -0
FNTA-210ENST00000533336 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
FNTA-210ENST00000533336 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
FNTA-210ENST00000533336 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
FNTA-210ENST00000533336 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
FNTA-210ENST00000533336 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
FNTA-210ENST00000533336 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
FNTA-210ENST00000533336 POTEHQ6S545 545 aa14.15□□□□□ -0.14
FNTA-210ENST00000533336 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
FNTA-210ENST00000533336 RNF216Q9NWF9 866 aaPredicted RBP14.14□□□□□ -0.15
FNTA-210ENST00000533336 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
FNTA-210ENST00000533336 DCAF1Q9Y4B6 1507 aa14.11□□□□□ -0.15
FNTA-210ENST00000533336 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
FNTA-210ENST00000533336 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
FNTA-210ENST00000533336 ABCC9O60706 1549 aa14□□□□□ -0.17
FNTA-210ENST00000533336 NACADO15069 1562 aa13.89□□□□□ -0.19
FNTA-210ENST00000533336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.79□□□□□ -0.2
FNTA-210ENST00000533336 RB1CC1Q8TDY2 1594 aa13.77□□□□□ -0.21
FNTA-210ENST00000533336 DCAF8L2P0C7V8 631 aa13.6□□□□□ -0.23
FNTA-210ENST00000533336 DSG3P32926 999 aa13.53□□□□□ -0.24
FNTA-210ENST00000533336 SCRIBQ14160 1630 aa13.52□□□□□ -0.25
FNTA-210ENST00000533336 CAPN15O75808 1086 aa13.46□□□□□ -0.25
FNTA-210ENST00000533336 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.25
FNTA-210ENST00000533336 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
FNTA-210ENST00000533336 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
FNTA-210ENST00000533336 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
FNTA-210ENST00000533336 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
FNTA-210ENST00000533336 U3KPZ7 1027 aaPredicted RBP13.35□□□□□ -0.27
FNTA-210ENST00000533336 NPM3O75607 178 aaKnown RBP13.17□□□□□ -0.3
FNTA-210ENST00000533336 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
FNTA-210ENST00000533336 ABCB7O75027 752 aa13.05□□□□□ -0.32
FNTA-210ENST00000533336 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
FNTA-210ENST00000533336 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
FNTA-210ENST00000533336 CECR2Q9BXF3 1484 aa13.04□□□□□ -0.32
FNTA-210ENST00000533336 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
FNTA-210ENST00000533336 APLP2Q06481 763 aa13.01□□□□□ -0.33
FNTA-210ENST00000533336 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
FNTA-210ENST00000533336 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
FNTA-210ENST00000533336 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
FNTA-210ENST00000533336 PEG3Q9GZU2 1588 aa12.99□□□□□ -0.33
FNTA-210ENST00000533336 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
FNTA-210ENST00000533336 EIF4G1Q04637 1599 aaKnown RBP12.96□□□□□ -0.33
FNTA-210ENST00000533336 CHRDL2Q6WN34 429 aa12.96□□□□□ -0.33
FNTA-210ENST00000533336 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
FNTA-210ENST00000533336 SMARCA2P51531 1590 aa12.88□□□□□ -0.35
FNTA-210ENST00000533336 WIZO95785 1651 aa12.86□□□□□ -0.35
FNTA-210ENST00000533336 ATAD2BQ9ULI0 1458 aa12.84□□□□□ -0.35
FNTA-210ENST00000533336 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
FNTA-210ENST00000533336 TOP2AP11388 1531 aaKnown RBP12.83□□□□□ -0.36
FNTA-210ENST00000533336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
FNTA-210ENST00000533336 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
FNTA-210ENST00000533336 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
FNTA-210ENST00000533336 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
FNTA-210ENST00000533336 SUPT5HO00267 1087 aaKnown RBP12.75□□□□□ -0.37
FNTA-210ENST00000533336 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
FNTA-210ENST00000533336 BAZ1BQ9UIG0 1483 aaKnown RBP12.73□□□□□ -0.37
FNTA-210ENST00000533336 KCNA4P22459 653 aa12.67□□□□□ -0.38
FNTA-210ENST00000533336 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
FNTA-210ENST00000533336 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
FNTA-210ENST00000533336 POLA2Q14181 598 aa12.53□□□□□ -0.4
FNTA-210ENST00000533336 HAX1O00165 279 aa12.5□□□□□ -0.41
FNTA-210ENST00000533336 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
FNTA-210ENST00000533336 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
FNTA-210ENST00000533336 CFTRP13569 1480 aa12.46□□□□□ -0.42
FNTA-210ENST00000533336 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
FNTA-210ENST00000533336 LAMC3Q9Y6N6 1575 aa12.4□□□□□ -0.42
FNTA-210ENST00000533336 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
FNTA-210ENST00000533336 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
FNTA-210ENST00000533336 FXR2P51116 673 aaKnown RBP eCLIP12.29□□□□□ -0.44
FNTA-210ENST00000533336 NESP48681 1621 aa12.26□□□□□ -0.45
FNTA-210ENST00000533336 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
FNTA-210ENST00000533336 FANCD2Q9BXW9 1451 aa12.25□□□□□ -0.45
FNTA-210ENST00000533336 BIVM-ERCC5R4GMW8 1640 aa12.25□□□□□ -0.45
FNTA-210ENST00000533336 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
FNTA-210ENST00000533336 WRNQ14191 1432 aaPredicted RBP eCLIP12.24□□□□□ -0.45
FNTA-210ENST00000533336 TOP2BQ02880 1626 aa12.23□□□□□ -0.45
FNTA-210ENST00000533336 PDS5BQ9NTI5 1447 aa12.23□□□□□ -0.45
FNTA-210ENST00000533336 PITPNM1O00562 1244 aa12.23□□□□□ -0.45
FNTA-210ENST00000533336 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
FNTA-210ENST00000533336 EVX2Q03828 476 aa12.22□□□□□ -0.45
FNTA-210ENST00000533336 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
FNTA-210ENST00000533336 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
FNTA-210ENST00000533336 CUX1P39880 1505 aa12.19□□□□□ -0.46
FNTA-210ENST00000533336 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
FNTA-210ENST00000533336 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms