RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 PHLDB1Q86UU1 1377 aa20.48■□□□□ 0.87
LRRK1-209ENST00000532145 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
LRRK1-209ENST00000532145 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
LRRK1-209ENST00000532145 PCF11O94913 1555 aaKnown RBP20.43■□□□□ 0.86
LRRK1-209ENST00000532145 ABCA10Q8WWZ4 1543 aa20.42■□□□□ 0.86
LRRK1-209ENST00000532145 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
LRRK1-209ENST00000532145 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
LRRK1-209ENST00000532145 EFCAB5A4FU69 1503 aa20.39■□□□□ 0.85
LRRK1-209ENST00000532145 FYCO1Q9BQS8 1478 aa20.38■□□□□ 0.85
LRRK1-209ENST00000532145 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
LRRK1-209ENST00000532145 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.36■□□□□ 0.85
LRRK1-209ENST00000532145 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
LRRK1-209ENST00000532145 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
LRRK1-209ENST00000532145 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
LRRK1-209ENST00000532145 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
LRRK1-209ENST00000532145 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
LRRK1-209ENST00000532145 FAM50AQ14320 339 aaKnown RBP20.34■□□□□ 0.85
LRRK1-209ENST00000532145 CUL7Q14999 1698 aa20.33■□□□□ 0.85
LRRK1-209ENST00000532145 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
LRRK1-209ENST00000532145 P3H3Q8IVL6 736 aa20.33■□□□□ 0.84
LRRK1-209ENST00000532145 WDR97A6NE52 1622 aa20.29■□□□□ 0.84
LRRK1-209ENST00000532145 SUPT16HQ9Y5B9 1047 aaKnown RBP20.28■□□□□ 0.84
LRRK1-209ENST00000532145 MYT1Q01538 1121 aa20.28■□□□□ 0.84
LRRK1-209ENST00000532145 CTTNBP2Q8WZ74 1663 aa20.27■□□□□ 0.84
LRRK1-209ENST00000532145 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.83
LRRK1-209ENST00000532145 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
LRRK1-209ENST00000532145 ATP1B4Q9UN42 357 aaPredicted RBP20.25■□□□□ 0.83
LRRK1-209ENST00000532145 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
LRRK1-209ENST00000532145 NESP48681 1621 aa20.22■□□□□ 0.83
LRRK1-209ENST00000532145 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
LRRK1-209ENST00000532145 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
LRRK1-209ENST00000532145 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
LRRK1-209ENST00000532145 SAMD9Q5K651 1589 aa20.16■□□□□ 0.82
LRRK1-209ENST00000532145 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
LRRK1-209ENST00000532145 LAMC3Q9Y6N6 1575 aa20.15■□□□□ 0.82
LRRK1-209ENST00000532145 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
LRRK1-209ENST00000532145 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.81
LRRK1-209ENST00000532145 HFM1A2PYH4 1435 aa20.14■□□□□ 0.81
LRRK1-209ENST00000532145 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
LRRK1-209ENST00000532145 CCDC18Q5T9S5 1454 aa20.11■□□□□ 0.81
LRRK1-209ENST00000532145 THOC2Q8NI27 1593 aaKnown RBP20.1■□□□□ 0.81
LRRK1-209ENST00000532145 PTPRKQ15262 1439 aa20.1■□□□□ 0.81
LRRK1-209ENST00000532145 UACAQ9BZF9 1416 aa20.1■□□□□ 0.81
LRRK1-209ENST00000532145 GRIN2BQ13224 1484 aa20.1■□□□□ 0.81
LRRK1-209ENST00000532145 GAPVD1Q14C86 1478 aa20.08■□□□□ 0.81
LRRK1-209ENST00000532145 PTPN23Q9H3S7 1636 aa20.08■□□□□ 0.8
LRRK1-209ENST00000532145 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.8
LRRK1-209ENST00000532145 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
LRRK1-209ENST00000532145 LRRIQ1Q96JM4 1722 aa20.07■□□□□ 0.8
LRRK1-209ENST00000532145 NCOA2Q15596 1464 aa20.07■□□□□ 0.8
LRRK1-209ENST00000532145 NAIPQ13075 1403 aa20.05■□□□□ 0.8
LRRK1-209ENST00000532145 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
LRRK1-209ENST00000532145 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
LRRK1-209ENST00000532145 EHBP1L1Q8N3D4 1523 aa20.04■□□□□ 0.8
LRRK1-209ENST00000532145 SUPT6HQ7KZ85 1726 aaKnown RBP20.03■□□□□ 0.8
LRRK1-209ENST00000532145 ARHGEF11O15085 1522 aa20.01■□□□□ 0.79
LRRK1-209ENST00000532145 PDS5BQ9NTI5 1447 aa20.01■□□□□ 0.79
LRRK1-209ENST00000532145 UGGT2Q9NYU1 1516 aa20■□□□□ 0.79
LRRK1-209ENST00000532145 HIRIP3Q9BW71 556 aaPredicted RBP19.99■□□□□ 0.79
LRRK1-209ENST00000532145 KIF21AQ7Z4S6 1674 aa19.99■□□□□ 0.79
LRRK1-209ENST00000532145 ANP32CO43423 234 aa19.98■□□□□ 0.79
LRRK1-209ENST00000532145 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
LRRK1-209ENST00000532145 KDM5BQ9UGL1 1544 aa19.94■□□□□ 0.78
LRRK1-209ENST00000532145 TCOF1Q13428 1488 aaKnown RBP19.94■□□□□ 0.78
LRRK1-209ENST00000532145 MAGI3Q5TCQ9 1506 aa19.94■□□□□ 0.78
LRRK1-209ENST00000532145 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
LRRK1-209ENST00000532145 AKNAQ7Z591 1439 aa19.91■□□□□ 0.78
LRRK1-209ENST00000532145 HECW1Q76N89 1606 aa19.88■□□□□ 0.77
LRRK1-209ENST00000532145 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
LRRK1-209ENST00000532145 FKBP8Q14318 412 aa19.87■□□□□ 0.77
LRRK1-209ENST00000532145 DENND4BO75064 1496 aaPredicted RBP19.85■□□□□ 0.77
LRRK1-209ENST00000532145 EPRSP07814 1512 aaKnown RBP19.85■□□□□ 0.77
LRRK1-209ENST00000532145 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
LRRK1-209ENST00000532145 IQGAP2Q13576 1575 aa19.84■□□□□ 0.77
LRRK1-209ENST00000532145 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
LRRK1-209ENST00000532145 RRP7BPQ9NSQ0 103 aa19.83■□□□□ 0.76
LRRK1-209ENST00000532145 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
LRRK1-209ENST00000532145 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
LRRK1-209ENST00000532145 BCANQ96GW7 911 aa19.8■□□□□ 0.76
LRRK1-209ENST00000532145 NEFLP07196 543 aa19.79■□□□□ 0.76
LRRK1-209ENST00000532145 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
LRRK1-209ENST00000532145 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
LRRK1-209ENST00000532145 WDR62O43379 1518 aa19.78■□□□□ 0.76
LRRK1-209ENST00000532145 KDM6BO15054 1643 aa19.77■□□□□ 0.76
LRRK1-209ENST00000532145 CDK13Q14004 1512 aaKnown RBP19.76■□□□□ 0.75
LRRK1-209ENST00000532145 WASHC2AQ641Q2 1341 aa19.75■□□□□ 0.75
LRRK1-209ENST00000532145 MPHOSPH9Q99550 1183 aa19.74■□□□□ 0.75
LRRK1-209ENST00000532145 HSPA5P11021 654 aaKnown RBP19.74■□□□□ 0.75
LRRK1-209ENST00000532145 ROCK1Q13464 1354 aa19.71■□□□□ 0.75
LRRK1-209ENST00000532145 EIF4G2P78344 907 aaKnown RBP eCLIP19.71■□□□□ 0.75
LRRK1-209ENST00000532145 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
LRRK1-209ENST00000532145 DAPK1P53355 1430 aa19.68■□□□□ 0.74
LRRK1-209ENST00000532145 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
LRRK1-209ENST00000532145 ANKRD30BQ9BXX2 1392 aa19.66■□□□□ 0.74
LRRK1-209ENST00000532145 CNTLNQ9NXG0 1405 aa19.65■□□□□ 0.74
LRRK1-209ENST00000532145 RPRD2Q5VT52 1461 aaKnown RBP19.65■□□□□ 0.74
LRRK1-209ENST00000532145 DNMT1P26358 1616 aaKnown RBP19.65■□□□□ 0.74
LRRK1-209ENST00000532145 ABCC5O15440 1437 aa19.64■□□□□ 0.73
LRRK1-209ENST00000532145 KIAA0586Q9BVV6 1533 aa19.64■□□□□ 0.73
LRRK1-209ENST00000532145 NCOA1Q15788 1441 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms