RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
LRRK1-209ENST00000532145 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
LRRK1-209ENST00000532145 CCDC180Q9P1Z9 1646 aa24.69■■□□□ 1.54
LRRK1-209ENST00000532145 ZCCHC6Q5VYS8 1495 aaKnown RBP24.66■■□□□ 1.54
LRRK1-209ENST00000532145 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
LRRK1-209ENST00000532145 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.43
LRRK1-209ENST00000532145 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
LRRK1-209ENST00000532145 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
LRRK1-209ENST00000532145 MYO15BQ96JP2 1530 aa23.73■■□□□ 1.39
LRRK1-209ENST00000532145 HRCP23327 699 aa23.33■■□□□ 1.32
LRRK1-209ENST00000532145 ABCC9O60706 1549 aa23.27■■□□□ 1.32
LRRK1-209ENST00000532145 PCGF6Q9BYE7 350 aa23.14■■□□□ 1.3
LRRK1-209ENST00000532145 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
LRRK1-209ENST00000532145 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
LRRK1-209ENST00000532145 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
LRRK1-209ENST00000532145 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
LRRK1-209ENST00000532145 NACADO15069 1562 aa22.8■■□□□ 1.24
LRRK1-209ENST00000532145 TRIM26Q12899 539 aaPredicted RBP22.76■■□□□ 1.23
LRRK1-209ENST00000532145 TRIM41Q8WV44 630 aa22.71■■□□□ 1.23
LRRK1-209ENST00000532145 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
LRRK1-209ENST00000532145 CECR2Q9BXF3 1484 aa22.62■■□□□ 1.21
LRRK1-209ENST00000532145 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.21
LRRK1-209ENST00000532145 WIZO95785 1651 aa22.44■■□□□ 1.18
LRRK1-209ENST00000532145 FAM9AQ8IZU1 332 aaPredicted RBP22.43■■□□□ 1.18
LRRK1-209ENST00000532145 BAZ1AQ9NRL2 1556 aaPredicted RBP22.38■■□□□ 1.17
LRRK1-209ENST00000532145 ZEB1P37275 1124 aaPredicted RBP22.36■■□□□ 1.17
LRRK1-209ENST00000532145 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
LRRK1-209ENST00000532145 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
LRRK1-209ENST00000532145 EHMT2Q96KQ7 1210 aa22.14■■□□□ 1.14
LRRK1-209ENST00000532145 SMARCA4P51532 1647 aa22.11■■□□□ 1.13
LRRK1-209ENST00000532145 CCDC88BA6NC98 1476 aa22.04■■□□□ 1.12
LRRK1-209ENST00000532145 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
LRRK1-209ENST00000532145 UNC13AQ9UPW8 1703 aa21.99■■□□□ 1.11
LRRK1-209ENST00000532145 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
LRRK1-209ENST00000532145 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
LRRK1-209ENST00000532145 EEA1Q15075 1411 aa21.83■■□□□ 1.09
LRRK1-209ENST00000532145 SOGA1O94964 1423 aa21.81■■□□□ 1.08
LRRK1-209ENST00000532145 TNIKQ9UKE5 1360 aa21.8■■□□□ 1.08
LRRK1-209ENST00000532145 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
LRRK1-209ENST00000532145 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
LRRK1-209ENST00000532145 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
LRRK1-209ENST00000532145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
LRRK1-209ENST00000532145 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
LRRK1-209ENST00000532145 CCER1Q8TC90 406 aaPredicted RBP21.71■■□□□ 1.07
LRRK1-209ENST00000532145 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
LRRK1-209ENST00000532145 GOLGA3Q08378 1498 aa21.64■■□□□ 1.05
LRRK1-209ENST00000532145 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
LRRK1-209ENST00000532145 UBTFP17480 764 aaKnown RBP21.58■■□□□ 1.05
LRRK1-209ENST00000532145 SCAF1Q9H7N4 1312 aaKnown RBP21.53■■□□□ 1.04
LRRK1-209ENST00000532145 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
LRRK1-209ENST00000532145 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
LRRK1-209ENST00000532145 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
LRRK1-209ENST00000532145 KIF21BO75037 1637 aa21.5■■□□□ 1.03
LRRK1-209ENST00000532145 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
LRRK1-209ENST00000532145 BAZ1BQ9UIG0 1483 aaKnown RBP21.43■■□□□ 1.02
LRRK1-209ENST00000532145 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
LRRK1-209ENST00000532145 CLIP1P30622 1438 aa21.37■■□□□ 1.01
LRRK1-209ENST00000532145 PELP1Q8IZL8 1130 aaKnown RBP21.33■■□□□ 1
LRRK1-209ENST00000532145 VPS8Q8N3P4 1428 aa21.33■■□□□ 1
LRRK1-209ENST00000532145 ACIN1Q9UKV3 1341 aaKnown RBP21.32■■□□□ 1
LRRK1-209ENST00000532145 RAPGEF2Q9Y4G8 1499 aa21.3■■□□□ 1
LRRK1-209ENST00000532145 TOP2BQ02880 1626 aa21.28■■□□□ 1
LRRK1-209ENST00000532145 NEUROD1Q13562 356 aa21.25■□□□□ 0.99
LRRK1-209ENST00000532145 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
LRRK1-209ENST00000532145 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
LRRK1-209ENST00000532145 CENPBP07199 599 aaPredicted RBP21.18■□□□□ 0.98
LRRK1-209ENST00000532145 HNRNPUL2Q1KMD3 747 aaKnown RBP21.16■□□□□ 0.98
LRRK1-209ENST00000532145 APLP2Q06481 763 aa21.15■□□□□ 0.98
LRRK1-209ENST00000532145 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
LRRK1-209ENST00000532145 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
LRRK1-209ENST00000532145 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
LRRK1-209ENST00000532145 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
LRRK1-209ENST00000532145 GTF3C3Q9Y5Q9 886 aa21.03■□□□□ 0.96
LRRK1-209ENST00000532145 ARAP1Q96P48 1450 aa21.02■□□□□ 0.96
LRRK1-209ENST00000532145 CUX1P39880 1505 aa21.02■□□□□ 0.95
LRRK1-209ENST00000532145 RANGAP1P46060 587 aaPredicted RBP21■□□□□ 0.95
LRRK1-209ENST00000532145 KIF27Q86VH2 1401 aa20.97■□□□□ 0.95
LRRK1-209ENST00000532145 CFTRP13569 1480 aa20.97■□□□□ 0.95
LRRK1-209ENST00000532145 CLSPNQ9HAW4 1339 aa20.97■□□□□ 0.95
LRRK1-209ENST00000532145 MIER1Q8N108 512 aa20.89■□□□□ 0.93
LRRK1-209ENST00000532145 KANK4Q5T7N3 995 aaPredicted RBP20.88■□□□□ 0.93
LRRK1-209ENST00000532145 RRBP1Q9P2E9 1410 aaKnown RBP20.88■□□□□ 0.93
LRRK1-209ENST00000532145 DHX57Q6P158 1386 aaKnown RBP20.88■□□□□ 0.93
LRRK1-209ENST00000532145 ARHGAP35Q9NRY4 1499 aa20.83■□□□□ 0.92
LRRK1-209ENST00000532145 CUX2O14529 1486 aa20.81■□□□□ 0.92
LRRK1-209ENST00000532145 YTHDC1Q96MU7 727 aaKnown RBP20.78■□□□□ 0.92
LRRK1-209ENST00000532145 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
LRRK1-209ENST00000532145 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
LRRK1-209ENST00000532145 IGF1RP08069 1367 aa20.73■□□□□ 0.91
LRRK1-209ENST00000532145 MAP3K1Q13233 1512 aa20.69■□□□□ 0.9
LRRK1-209ENST00000532145 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
LRRK1-209ENST00000532145 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
LRRK1-209ENST00000532145 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
LRRK1-209ENST00000532145 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
LRRK1-209ENST00000532145 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
LRRK1-209ENST00000532145 RAB3GAP2Q9H2M9 1393 aa20.55■□□□□ 0.88
LRRK1-209ENST00000532145 FHAD1B1AJZ9 1412 aa20.53■□□□□ 0.88
LRRK1-209ENST00000532145 MAPKBP1O60336 1514 aa20.52■□□□□ 0.87
LRRK1-209ENST00000532145 ITGAEP38570 1179 aa20.51■□□□□ 0.87
LRRK1-209ENST00000532145 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms