RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 OSCARQ8IYS5 282 aa9.91□□□□□ -0.82
HMGB1P42-201ENST00000532126 BIVM-ERCC5R4GMW8 1640 aa9.89□□□□□ -0.83
HMGB1P42-201ENST00000532126 ABCA10Q8WWZ4 1543 aa9.89□□□□□ -0.83
HMGB1P42-201ENST00000532126 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
HMGB1P42-201ENST00000532126 GRIN2BQ13224 1484 aa9.87□□□□□ -0.83
HMGB1P42-201ENST00000532126 FBLN2P98095 1184 aa9.87□□□□□ -0.83
HMGB1P42-201ENST00000532126 GAPVD1Q14C86 1478 aa9.86□□□□□ -0.83
HMGB1P42-201ENST00000532126 SNAPC4Q5SXM2 1469 aa9.85□□□□□ -0.83
HMGB1P42-201ENST00000532126 CHMP7Q8WUX9 453 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P42-201ENST00000532126 MAGI1Q96QZ7 1491 aaPredicted RBP9.84□□□□□ -0.83
HMGB1P42-201ENST00000532126 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
HMGB1P42-201ENST00000532126 TAOK2Q9UL54 1235 aa9.82□□□□□ -0.84
HMGB1P42-201ENST00000532126 SYNJ2O15056 1496 aa9.8□□□□□ -0.84
HMGB1P42-201ENST00000532126 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P42-201ENST00000532126 PBRM1Q86U86 1689 aa9.78□□□□□ -0.84
HMGB1P42-201ENST00000532126 HAP1P54257 671 aaPredicted RBP9.78□□□□□ -0.84
HMGB1P42-201ENST00000532126 CHD1O14646 1710 aa9.78□□□□□ -0.84
HMGB1P42-201ENST00000532126 KIF27Q86VH2 1401 aa9.77□□□□□ -0.85
HMGB1P42-201ENST00000532126 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
HMGB1P42-201ENST00000532126 ERICH3Q5RHP9 1530 aa9.77□□□□□ -0.85
HMGB1P42-201ENST00000532126 FHAD1B1AJZ9 1412 aa9.76□□□□□ -0.85
HMGB1P42-201ENST00000532126 DAXXQ9UER7 740 aaPredicted RBP9.76□□□□□ -0.85
HMGB1P42-201ENST00000532126 ADAMTS12P58397 1594 aa9.74□□□□□ -0.85
HMGB1P42-201ENST00000532126 GRIN2AQ12879 1464 aa9.73□□□□□ -0.85
HMGB1P42-201ENST00000532126 ATF5Q9Y2D1 282 aaPredicted RBP9.73□□□□□ -0.85
HMGB1P42-201ENST00000532126 IGF1RP08069 1367 aa9.73□□□□□ -0.85
HMGB1P42-201ENST00000532126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.72□□□□□ -0.85
HMGB1P42-201ENST00000532126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P42-201ENST00000532126 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
HMGB1P42-201ENST00000532126 VSIG10Q8N0Z9 540 aa9.71□□□□□ -0.86
HMGB1P42-201ENST00000532126 CLASP1Q7Z460 1538 aa9.71□□□□□ -0.86
HMGB1P42-201ENST00000532126 DCAF8L1A6NGE4 600 aa9.7□□□□□ -0.86
HMGB1P42-201ENST00000532126 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
HMGB1P42-201ENST00000532126 ARHGEF11O15085 1522 aa9.7□□□□□ -0.86
HMGB1P42-201ENST00000532126 NUP160Q12769 1436 aa9.69□□□□□ -0.86
HMGB1P42-201ENST00000532126 RIMBP3CA6NJZ7 1639 aa9.68□□□□□ -0.86
HMGB1P42-201ENST00000532126 RIMBP3BA6NNM3 1639 aa9.68□□□□□ -0.86
HMGB1P42-201ENST00000532126 RIMBP3Q9UFD9 1639 aa9.68□□□□□ -0.86
HMGB1P42-201ENST00000532126 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
HMGB1P42-201ENST00000532126 CEP170Q5SW79 1584 aa9.67□□□□□ -0.86
HMGB1P42-201ENST00000532126 CYB5RLQ6IPT4 315 aa9.66□□□□□ -0.86
HMGB1P42-201ENST00000532126 CUL7Q14999 1698 aa9.66□□□□□ -0.86
HMGB1P42-201ENST00000532126 RUSC2Q8N2Y8 1516 aa9.66□□□□□ -0.86
HMGB1P42-201ENST00000532126 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
HMGB1P42-201ENST00000532126 ARXQ96QS3 562 aa9.63□□□□□ -0.87
HMGB1P42-201ENST00000532126 ARAP1Q96P48 1450 aa9.62□□□□□ -0.87
HMGB1P42-201ENST00000532126 JPH4Q96JJ6 628 aa9.62□□□□□ -0.87
HMGB1P42-201ENST00000532126 RAPGEF2Q9Y4G8 1499 aa9.6□□□□□ -0.87
HMGB1P42-201ENST00000532126 U3KPZ7 1027 aaPredicted RBP9.6□□□□□ -0.87
HMGB1P42-201ENST00000532126 KIAA0586Q9BVV6 1533 aa9.6□□□□□ -0.87
HMGB1P42-201ENST00000532126 PRG4Q92954 1404 aaPredicted RBP9.59□□□□□ -0.87
HMGB1P42-201ENST00000532126 EEA1Q15075 1411 aa9.58□□□□□ -0.88
HMGB1P42-201ENST00000532126 SHROOM2Q13796 1616 aa9.58□□□□□ -0.88
HMGB1P42-201ENST00000532126 ERICH6Q7L0X2 663 aa9.58□□□□□ -0.88
HMGB1P42-201ENST00000532126 FAM9AQ8IZU1 332 aaPredicted RBP9.57□□□□□ -0.88
HMGB1P42-201ENST00000532126 PRXQ9BXM0 1461 aa9.57□□□□□ -0.88
HMGB1P42-201ENST00000532126 ERCC6L2Q5T890 1561 aa9.57□□□□□ -0.88
HMGB1P42-201ENST00000532126 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
HMGB1P42-201ENST00000532126 IQGAP2Q13576 1575 aa9.53□□□□□ -0.88
HMGB1P42-201ENST00000532126 CARMIL2Q6F5E8 1435 aa9.52□□□□□ -0.89
HMGB1P42-201ENST00000532126 ZNF219Q9P2Y4 722 aaPredicted RBP9.52□□□□□ -0.89
HMGB1P42-201ENST00000532126 TTBK1Q5TCY1 1321 aaPredicted RBP9.5□□□□□ -0.89
HMGB1P42-201ENST00000532126 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
HMGB1P42-201ENST00000532126 PTPRGP23470 1445 aa9.48□□□□□ -0.89
HMGB1P42-201ENST00000532126 UGGT2Q9NYU1 1516 aa9.48□□□□□ -0.89
HMGB1P42-201ENST00000532126 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
HMGB1P42-201ENST00000532126 APLP2Q06481 763 aa9.48□□□□□ -0.89
HMGB1P42-201ENST00000532126 DISP1Q96F81 1524 aa9.47□□□□□ -0.89
HMGB1P42-201ENST00000532126 SPDYE4A6NLX3 237 aa9.46□□□□□ -0.9
HMGB1P42-201ENST00000532126 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
HMGB1P42-201ENST00000532126 TIMELESSQ9UNS1 1208 aa9.46□□□□□ -0.9
HMGB1P42-201ENST00000532126 GOLGA3Q08378 1498 aa9.46□□□□□ -0.9
HMGB1P42-201ENST00000532126 CTTNBP2Q8WZ74 1663 aa9.45□□□□□ -0.9
HMGB1P42-201ENST00000532126 KIF21BO75037 1637 aa9.45□□□□□ -0.9
HMGB1P42-201ENST00000532126 KIAA0556O60303 1618 aa9.43□□□□□ -0.9
HMGB1P42-201ENST00000532126 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P42-201ENST00000532126 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
HMGB1P42-201ENST00000532126 RANGAP1P46060 587 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P42-201ENST00000532126 UACAQ9BZF9 1416 aa9.41□□□□□ -0.9
HMGB1P42-201ENST00000532126 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
HMGB1P42-201ENST00000532126 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.41□□□□□ -0.9
HMGB1P42-201ENST00000532126 ADCY10Q96PN6 1610 aa9.41□□□□□ -0.9
HMGB1P42-201ENST00000532126 UHRF1BP1LA0JNW5 1464 aa9.39□□□□□ -0.91
HMGB1P42-201ENST00000532126 ABCC2Q92887 1545 aa9.38□□□□□ -0.91
HMGB1P42-201ENST00000532126 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
HMGB1P42-201ENST00000532126 PLB1Q6P1J6 1458 aa9.37□□□□□ -0.91
HMGB1P42-201ENST00000532126 HOMEZQ8IX15 550 aa9.37□□□□□ -0.91
HMGB1P42-201ENST00000532126 GTF3C3Q9Y5Q9 886 aa9.37□□□□□ -0.91
HMGB1P42-201ENST00000532126 SAMD9Q5K651 1589 aa9.37□□□□□ -0.91
HMGB1P42-201ENST00000532126 MAPKBP1O60336 1514 aa9.36□□□□□ -0.91
HMGB1P42-201ENST00000532126 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
HMGB1P42-201ENST00000532126 FHOD3Q2V2M9 1422 aa9.34□□□□□ -0.91
HMGB1P42-201ENST00000532126 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P42-201ENST00000532126 PROM2Q8N271 834 aa9.34□□□□□ -0.91
HMGB1P42-201ENST00000532126 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.91
HMGB1P42-201ENST00000532126 EFCAB5A4FU69 1503 aa9.34□□□□□ -0.91
HMGB1P42-201ENST00000532126 KDM5BQ9UGL1 1544 aa9.34□□□□□ -0.91
HMGB1P42-201ENST00000532126 ABCC10Q5T3U5 1492 aa9.34□□□□□ -0.91
HMGB1P42-201ENST00000532126 ABCA8O94911 1581 aa9.33□□□□□ -0.92
HMGB1P42-201ENST00000532126 ASXL2Q76L83 1435 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms