RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 U3KPZ7 1027 aaPredicted RBP20.91■□□□□ 0.94
COPB1-208ENST00000532088 AQRO60306 1485 aaKnown RBP eCLIP20.89■□□□□ 0.94
COPB1-208ENST00000532088 EEA1Q15075 1411 aa20.89■□□□□ 0.94
COPB1-208ENST00000532088 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
COPB1-208ENST00000532088 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
COPB1-208ENST00000532088 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
COPB1-208ENST00000532088 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
COPB1-208ENST00000532088 RNF39Q9H2S5 420 aa20.79■□□□□ 0.92
COPB1-208ENST00000532088 IGF1RP08069 1367 aa20.79■□□□□ 0.92
COPB1-208ENST00000532088 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
COPB1-208ENST00000532088 CUL7Q14999 1698 aa20.75■□□□□ 0.91
COPB1-208ENST00000532088 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
COPB1-208ENST00000532088 FHAD1B1AJZ9 1412 aa20.72■□□□□ 0.91
COPB1-208ENST00000532088 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
COPB1-208ENST00000532088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
COPB1-208ENST00000532088 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
COPB1-208ENST00000532088 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
COPB1-208ENST00000532088 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
COPB1-208ENST00000532088 PRXQ9BXM0 1461 aa20.67■□□□□ 0.9
COPB1-208ENST00000532088 SAMD1Q6SPF0 538 aaPredicted RBP20.64■□□□□ 0.89
COPB1-208ENST00000532088 ATXN8OSP0DMR3 200 aa20.62■□□□□ 0.89
COPB1-208ENST00000532088 RAPGEF2Q9Y4G8 1499 aa20.62■□□□□ 0.89
COPB1-208ENST00000532088 KIF21BO75037 1637 aa20.6■□□□□ 0.89
COPB1-208ENST00000532088 GRIN2AQ12879 1464 aa20.59■□□□□ 0.89
COPB1-208ENST00000532088 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
COPB1-208ENST00000532088 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
COPB1-208ENST00000532088 CHD1O14646 1710 aa20.56■□□□□ 0.88
COPB1-208ENST00000532088 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
COPB1-208ENST00000532088 NUP160Q12769 1436 aa20.52■□□□□ 0.87
COPB1-208ENST00000532088 FBLN2P98095 1184 aa20.5■□□□□ 0.87
COPB1-208ENST00000532088 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
COPB1-208ENST00000532088 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
COPB1-208ENST00000532088 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
COPB1-208ENST00000532088 APLP2Q06481 763 aa20.44■□□□□ 0.86
COPB1-208ENST00000532088 KIAA0586Q9BVV6 1533 aa20.42■□□□□ 0.86
COPB1-208ENST00000532088 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
COPB1-208ENST00000532088 ATF5Q9Y2D1 282 aaPredicted RBP20.39■□□□□ 0.85
COPB1-208ENST00000532088 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
COPB1-208ENST00000532088 IQGAP2Q13576 1575 aa20.34■□□□□ 0.85
COPB1-208ENST00000532088 TNIKQ9UKE5 1360 aa20.33■□□□□ 0.84
COPB1-208ENST00000532088 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
COPB1-208ENST00000532088 SHROOM2Q13796 1616 aa20.31■□□□□ 0.84
COPB1-208ENST00000532088 UGGT2Q9NYU1 1516 aa20.28■□□□□ 0.84
COPB1-208ENST00000532088 JPH4Q96JJ6 628 aa20.26■□□□□ 0.83
COPB1-208ENST00000532088 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
COPB1-208ENST00000532088 LOC105371045A0A1W2PR82 267 aa20.21■□□□□ 0.83
COPB1-208ENST00000532088 EFCAB5A4FU69 1503 aa20.19■□□□□ 0.82
COPB1-208ENST00000532088 CARMIL2Q6F5E8 1435 aa20.18■□□□□ 0.82
COPB1-208ENST00000532088 PRG4Q92954 1404 aaPredicted RBP20.18■□□□□ 0.82
COPB1-208ENST00000532088 SAMD9Q5K651 1589 aa20.17■□□□□ 0.82
COPB1-208ENST00000532088 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
COPB1-208ENST00000532088 KIAA0556O60303 1618 aa20.14■□□□□ 0.81
COPB1-208ENST00000532088 CAPN15O75808 1086 aa20.14■□□□□ 0.81
COPB1-208ENST00000532088 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
COPB1-208ENST00000532088 CACNB1Q02641 598 aaPredicted RBP20.13■□□□□ 0.81
COPB1-208ENST00000532088 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
COPB1-208ENST00000532088 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
COPB1-208ENST00000532088 CLIP1P30622 1438 aa20.1■□□□□ 0.81
COPB1-208ENST00000532088 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
COPB1-208ENST00000532088 ARHGAP35Q9NRY4 1499 aa20.09■□□□□ 0.81
COPB1-208ENST00000532088 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.81
COPB1-208ENST00000532088 ERCC6L2Q5T890 1561 aa20.08■□□□□ 0.8
COPB1-208ENST00000532088 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
COPB1-208ENST00000532088 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
COPB1-208ENST00000532088 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
COPB1-208ENST00000532088 PTPRGP23470 1445 aa20■□□□□ 0.79
COPB1-208ENST00000532088 FHOD3Q2V2M9 1422 aa20■□□□□ 0.79
COPB1-208ENST00000532088 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
COPB1-208ENST00000532088 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
COPB1-208ENST00000532088 FMN1Q68DA7 1419 aa19.98■□□□□ 0.79
COPB1-208ENST00000532088 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
COPB1-208ENST00000532088 ABCA8O94911 1581 aa19.91■□□□□ 0.78
COPB1-208ENST00000532088 UACAQ9BZF9 1416 aa19.91■□□□□ 0.78
COPB1-208ENST00000532088 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
COPB1-208ENST00000532088 ABCC2Q92887 1545 aa19.87■□□□□ 0.77
COPB1-208ENST00000532088 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
COPB1-208ENST00000532088 RAPGEF6Q8TEU7 1601 aa19.87■□□□□ 0.77
COPB1-208ENST00000532088 PLB1Q6P1J6 1458 aa19.86■□□□□ 0.77
COPB1-208ENST00000532088 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
COPB1-208ENST00000532088 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
COPB1-208ENST00000532088 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
COPB1-208ENST00000532088 DSG3P32926 999 aa19.83■□□□□ 0.77
COPB1-208ENST00000532088 POLA2Q14181 598 aa19.83■□□□□ 0.77
COPB1-208ENST00000532088 HECW1Q76N89 1606 aa19.82■□□□□ 0.76
COPB1-208ENST00000532088 ADCY10Q96PN6 1610 aa19.82■□□□□ 0.76
COPB1-208ENST00000532088 PCF11O94913 1555 aaKnown RBP19.81■□□□□ 0.76
COPB1-208ENST00000532088 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
COPB1-208ENST00000532088 KDM5BQ9UGL1 1544 aa19.79■□□□□ 0.76
COPB1-208ENST00000532088 NUP153P49790 1475 aaKnown RBP19.79■□□□□ 0.76
COPB1-208ENST00000532088 ABCB7O75027 752 aa19.77■□□□□ 0.76
COPB1-208ENST00000532088 CCDC18Q5T9S5 1454 aa19.76■□□□□ 0.75
COPB1-208ENST00000532088 EPRSP07814 1512 aaKnown RBP19.73■□□□□ 0.75
COPB1-208ENST00000532088 MAP3K1Q13233 1512 aa19.72■□□□□ 0.75
COPB1-208ENST00000532088 ATP10BO94823 1461 aa19.72■□□□□ 0.75
COPB1-208ENST00000532088 NPM1P06748 294 aaKnown RBP eCLIP19.71■□□□□ 0.75
COPB1-208ENST00000532088 ZCCHC11Q5TAX3 1644 aaKnown RBP19.7■□□□□ 0.74
COPB1-208ENST00000532088 MAPKBP1O60336 1514 aa19.68■□□□□ 0.74
COPB1-208ENST00000532088 LRRIQ1Q96JM4 1722 aa19.67■□□□□ 0.74
COPB1-208ENST00000532088 ATP1B4Q9UN42 357 aaPredicted RBP19.65■□□□□ 0.74
COPB1-208ENST00000532088 CDK13Q14004 1512 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms