RNA–Protein interactions for RNA: ENST00000531983.1

RBBP4-219, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-219ENST00000531983 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
RBBP4-219ENST00000531983 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
RBBP4-219ENST00000531983 ZBTB22O15209 634 aa10.62□□□□□ -0.71
RBBP4-219ENST00000531983 RIMBP3CA6NJZ7 1639 aa10.59□□□□□ -0.71
RBBP4-219ENST00000531983 RIMBP3BA6NNM3 1639 aa10.59□□□□□ -0.71
RBBP4-219ENST00000531983 RIMBP3Q9UFD9 1639 aa10.59□□□□□ -0.71
RBBP4-219ENST00000531983 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
RBBP4-219ENST00000531983 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
RBBP4-219ENST00000531983 EIF4G3O43432 1585 aaKnown RBP10.58□□□□□ -0.72
RBBP4-219ENST00000531983 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
RBBP4-219ENST00000531983 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
RBBP4-219ENST00000531983 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
RBBP4-219ENST00000531983 ARHGEF11O15085 1522 aa10.54□□□□□ -0.72
RBBP4-219ENST00000531983 FBLN2P98095 1184 aa10.54□□□□□ -0.72
RBBP4-219ENST00000531983 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
RBBP4-219ENST00000531983 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
RBBP4-219ENST00000531983 DNMBPQ6XZF7 1577 aa10.53□□□□□ -0.72
RBBP4-219ENST00000531983 EVX2Q03828 476 aa10.53□□□□□ -0.72
RBBP4-219ENST00000531983 ABCC8Q09428 1581 aa10.52□□□□□ -0.73
RBBP4-219ENST00000531983 CCDC88BA6NC98 1476 aa10.5□□□□□ -0.73
RBBP4-219ENST00000531983 CHD1O14646 1710 aa10.5□□□□□ -0.73
RBBP4-219ENST00000531983 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.73
RBBP4-219ENST00000531983 SPDYE1Q8NFV5 336 aaPredicted RBP10.46□□□□□ -0.73
RBBP4-219ENST00000531983 TARBP1Q13395 1621 aaKnown RBP10.46□□□□□ -0.74
RBBP4-219ENST00000531983 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
RBBP4-219ENST00000531983 WDR97A6NE52 1622 aa10.42□□□□□ -0.74
RBBP4-219ENST00000531983 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
RBBP4-219ENST00000531983 ARAP1Q96P48 1450 aa10.41□□□□□ -0.74
RBBP4-219ENST00000531983 MKRN4PQ13434 485 aaPredicted RBP10.4□□□□□ -0.74
RBBP4-219ENST00000531983 AQRO60306 1485 aaKnown RBP eCLIP10.4□□□□□ -0.741e-6■■□□□ 13.9
RBBP4-219ENST00000531983 SSUH2Q9Y2M2 353 aa10.39□□□□□ -0.75
RBBP4-219ENST00000531983 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
RBBP4-219ENST00000531983 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
RBBP4-219ENST00000531983 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
RBBP4-219ENST00000531983 SYNJ1O43426 1573 aa10.37□□□□□ -0.75
RBBP4-219ENST00000531983 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
RBBP4-219ENST00000531983 CYB5RLQ6IPT4 315 aa10.35□□□□□ -0.75
RBBP4-219ENST00000531983 FGD5Q6ZNL6 1462 aa10.35□□□□□ -0.75
RBBP4-219ENST00000531983 MAGI1Q96QZ7 1491 aaPredicted RBP10.34□□□□□ -0.75
RBBP4-219ENST00000531983 RAD54L2Q9Y4B4 1467 aa10.34□□□□□ -0.75
RBBP4-219ENST00000531983 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
RBBP4-219ENST00000531983 SOGA1O94964 1423 aa10.32□□□□□ -0.76
RBBP4-219ENST00000531983 GRIN2BQ13224 1484 aa10.3□□□□□ -0.76
RBBP4-219ENST00000531983 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
RBBP4-219ENST00000531983 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
RBBP4-219ENST00000531983 CUX1P39880 1505 aa10.29□□□□□ -0.76
RBBP4-219ENST00000531983 GABBR2O75899 941 aa10.29□□□□□ -0.76
RBBP4-219ENST00000531983 CHADLQ6NUI6 762 aa10.27□□□□□ -0.77
RBBP4-219ENST00000531983 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
RBBP4-219ENST00000531983 ABCA5Q8WWZ7 1642 aa10.25□□□□□ -0.77
RBBP4-219ENST00000531983 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
RBBP4-219ENST00000531983 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
RBBP4-219ENST00000531983 LHX8Q68G74 356 aa10.21□□□□□ -0.77
RBBP4-219ENST00000531983 ABCA10Q8WWZ4 1543 aa10.21□□□□□ -0.78
RBBP4-219ENST00000531983 ADAMTS12P58397 1594 aa10.21□□□□□ -0.78
RBBP4-219ENST00000531983 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
RBBP4-219ENST00000531983 CEP170Q5SW79 1584 aa10.15□□□□□ -0.78
RBBP4-219ENST00000531983 BIVM-ERCC5R4GMW8 1640 aa10.15□□□□□ -0.79
RBBP4-219ENST00000531983 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
RBBP4-219ENST00000531983 ERCC6L2Q5T890 1561 aa10.14□□□□□ -0.79
RBBP4-219ENST00000531983 SHROOM2Q13796 1616 aa10.13□□□□□ -0.79
RBBP4-219ENST00000531983 TOP2BQ02880 1626 aa10.12□□□□□ -0.79
RBBP4-219ENST00000531983 CD44P16070 742 aaKnown RBP10.12□□□□□ -0.79
RBBP4-219ENST00000531983 NUP160Q12769 1436 aa10.12□□□□□ -0.79
RBBP4-219ENST00000531983 FHAD1B1AJZ9 1412 aa10.1□□□□□ -0.79
RBBP4-219ENST00000531983 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
RBBP4-219ENST00000531983 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
RBBP4-219ENST00000531983 RUSC2Q8N2Y8 1516 aa10.08□□□□□ -0.8
RBBP4-219ENST00000531983 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
RBBP4-219ENST00000531983 KIF13AQ9H1H9 1805 aa10.05□□□□□ -0.8
RBBP4-219ENST00000531983 CLCN6P51797 869 aa10.05□□□□□ -0.8
RBBP4-219ENST00000531983 PRG4Q92954 1404 aaPredicted RBP10.02□□□□□ -0.81
RBBP4-219ENST00000531983 SUPT5HO00267 1087 aaKnown RBP10.01□□□□□ -0.81
RBBP4-219ENST00000531983 MAPKBP1O60336 1514 aa10.01□□□□□ -0.81
RBBP4-219ENST00000531983 DIP2BQ9P265 1576 aa10□□□□□ -0.81
RBBP4-219ENST00000531983 CUL7Q14999 1698 aa9.99□□□□□ -0.81
RBBP4-219ENST00000531983 ADCY10Q96PN6 1610 aa9.98□□□□□ -0.81
RBBP4-219ENST00000531983 ABCC10Q5T3U5 1492 aa9.98□□□□□ -0.81
RBBP4-219ENST00000531983 KDM6BO15054 1643 aa9.97□□□□□ -0.81
RBBP4-219ENST00000531983 DCBLD2Q96PD2 775 aa9.97□□□□□ -0.81
RBBP4-219ENST00000531983 ZNF579Q8NAF0 562 aaKnown RBP9.95□□□□□ -0.82
RBBP4-219ENST00000531983 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
RBBP4-219ENST00000531983 JPH4Q96JJ6 628 aa9.92□□□□□ -0.82
RBBP4-219ENST00000531983 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
RBBP4-219ENST00000531983 KIAA0586Q9BVV6 1533 aa9.92□□□□□ -0.82
RBBP4-219ENST00000531983 FAM69CQ0P6D2 419 aa9.91□□□□□ -0.82
RBBP4-219ENST00000531983 KIF27Q86VH2 1401 aa9.9□□□□□ -0.82
RBBP4-219ENST00000531983 CREBZFQ9NS37 354 aa9.9□□□□□ -0.82
RBBP4-219ENST00000531983 TSPOAP1O95153 1857 aa9.89□□□□□ -0.83
RBBP4-219ENST00000531983 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
RBBP4-219ENST00000531983 IQGAP2Q13576 1575 aa9.88□□□□□ -0.83
RBBP4-219ENST00000531983 CARMIL2Q6F5E8 1435 aa9.86□□□□□ -0.83
RBBP4-219ENST00000531983 ABCC2Q92887 1545 aa9.86□□□□□ -0.83
RBBP4-219ENST00000531983 CSRNP3Q8WYN3 585 aa9.85□□□□□ -0.83
RBBP4-219ENST00000531983 GALR2O43603 387 aaPredicted RBP9.84□□□□□ -0.83
RBBP4-219ENST00000531983 PTPRGP23470 1445 aa9.83□□□□□ -0.84
RBBP4-219ENST00000531983 TNIKQ9UKE5 1360 aa9.82□□□□□ -0.84
RBBP4-219ENST00000531983 PLB1Q6P1J6 1458 aa9.82□□□□□ -0.84
RBBP4-219ENST00000531983 GLI2P10070 1586 aa9.82□□□□□ -0.84
RBBP4-219ENST00000531983 ASXL2Q76L83 1435 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms