RNA–Protein interactions for RNA: ENST00000531184.5

GSDMD-211, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-211ENST00000531184 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
GSDMD-211ENST00000531184 KIF27Q86VH2 1401 aa30.37■■■□□ 2.45
GSDMD-211ENST00000531184 APLP2Q06481 763 aa30.37■■■□□ 2.45
GSDMD-211ENST00000531184 GRIN2BQ13224 1484 aa30.34■■■□□ 2.45
GSDMD-211ENST00000531184 SNAPC4Q5SXM2 1469 aa30.27■■■□□ 2.44
GSDMD-211ENST00000531184 PBRM1Q86U86 1689 aa30.27■■■□□ 2.44
GSDMD-211ENST00000531184 IGF1RP08069 1367 aa30.24■■■□□ 2.43
GSDMD-211ENST00000531184 FBLN2P98095 1184 aa30.22■■■□□ 2.43
GSDMD-211ENST00000531184 ERICH3Q5RHP9 1530 aa30.2■■■□□ 2.43
GSDMD-211ENST00000531184 MAGI1Q96QZ7 1491 aaPredicted RBP30.18■■■□□ 2.42
GSDMD-211ENST00000531184 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
GSDMD-211ENST00000531184 ADAMTS12P58397 1594 aa30.08■■■□□ 2.41
GSDMD-211ENST00000531184 SYNJ2O15056 1496 aa30.08■■■□□ 2.41
GSDMD-211ENST00000531184 FHAD1B1AJZ9 1412 aa30.08■■■□□ 2.41
GSDMD-211ENST00000531184 CARMIL1Q5VZK9 1371 aa30.06■■■□□ 2.4
GSDMD-211ENST00000531184 EEA1Q15075 1411 aa30.04■■■□□ 2.4
GSDMD-211ENST00000531184 CHD1O14646 1710 aa30.03■■■□□ 2.4
GSDMD-211ENST00000531184 CUL7Q14999 1698 aa29.99■■■□□ 2.39
GSDMD-211ENST00000531184 OSCARQ8IYS5 282 aa29.98■■■□□ 2.39
GSDMD-211ENST00000531184 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
GSDMD-211ENST00000531184 GRIN2AQ12879 1464 aa29.97■■■□□ 2.39
GSDMD-211ENST00000531184 RBM19Q9Y4C8 960 aaKnown RBP29.95■■■□□ 2.38
GSDMD-211ENST00000531184 PRXQ9BXM0 1461 aa29.91■■■□□ 2.38
GSDMD-211ENST00000531184 RAPGEF2Q9Y4G8 1499 aa29.9■■■□□ 2.38
GSDMD-211ENST00000531184 MYT1LQ9UL68 1186 aa29.87■■■□□ 2.37
GSDMD-211ENST00000531184 CEP170Q5SW79 1584 aa29.8■■■□□ 2.36
GSDMD-211ENST00000531184 NUP160Q12769 1436 aa29.79■■■□□ 2.36
GSDMD-211ENST00000531184 MSH5O43196 834 aa29.73■■■□□ 2.35
GSDMD-211ENST00000531184 KIF21BO75037 1637 aa29.7■■■□□ 2.35
GSDMD-211ENST00000531184 CLASP1Q7Z460 1538 aa29.69■■■□□ 2.34
GSDMD-211ENST00000531184 DNAJC5Q9H3Z4 198 aa29.64■■■□□ 2.34
GSDMD-211ENST00000531184 KIAA0586Q9BVV6 1533 aa29.64■■■□□ 2.34
GSDMD-211ENST00000531184 FANCIQ9NVI1 1328 aa29.63■■■□□ 2.33
GSDMD-211ENST00000531184 UBTFP17480 764 aaKnown RBP29.63■■■□□ 2.33
GSDMD-211ENST00000531184 GOLGA3Q08378 1498 aa29.62■■■□□ 2.33
GSDMD-211ENST00000531184 BCANQ96GW7 911 aa29.61■■■□□ 2.33
GSDMD-211ENST00000531184 ANO8Q9HCE9 1232 aaPredicted RBP29.6■■■□□ 2.33
GSDMD-211ENST00000531184 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
GSDMD-211ENST00000531184 FKBP8Q14318 412 aa29.56■■■□□ 2.32
GSDMD-211ENST00000531184 IQGAP2Q13576 1575 aa29.53■■■□□ 2.32
GSDMD-211ENST00000531184 RANGAP1P46060 587 aaPredicted RBP29.52■■■□□ 2.32
GSDMD-211ENST00000531184 CTTNBP2Q8WZ74 1663 aa29.51■■■□□ 2.32
GSDMD-211ENST00000531184 DEKP35659 375 aaKnown RBP29.49■■■□□ 2.31
GSDMD-211ENST00000531184 ERICH6BQ5W0A0 696 aa29.49■■■□□ 2.31
GSDMD-211ENST00000531184 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
GSDMD-211ENST00000531184 PRG4Q92954 1404 aaPredicted RBP29.47■■■□□ 2.31
GSDMD-211ENST00000531184 SHROOM2Q13796 1616 aa29.46■■■□□ 2.31
GSDMD-211ENST00000531184 ERCC6L2Q5T890 1561 aa29.45■■■□□ 2.3
GSDMD-211ENST00000531184 ARHGEF11O15085 1522 aa29.45■■■□□ 2.3
GSDMD-211ENST00000531184 NEFLP07196 543 aa29.38■■■□□ 2.29
GSDMD-211ENST00000531184 RIMBP3CA6NJZ7 1639 aa29.37■■■□□ 2.29
GSDMD-211ENST00000531184 RIMBP3BA6NNM3 1639 aa29.37■■■□□ 2.29
GSDMD-211ENST00000531184 RIMBP3Q9UFD9 1639 aa29.37■■■□□ 2.29
GSDMD-211ENST00000531184 UGGT2Q9NYU1 1516 aa29.37■■■□□ 2.29
GSDMD-211ENST00000531184 TNIKQ9UKE5 1360 aa29.35■■■□□ 2.29
GSDMD-211ENST00000531184 P3H3Q8IVL6 736 aa29.34■■■□□ 2.29
GSDMD-211ENST00000531184 DISP1Q96F81 1524 aa29.33■■■□□ 2.29
GSDMD-211ENST00000531184 UBE2Q2Q8WVN8 375 aa29.32■■■□□ 2.28
GSDMD-211ENST00000531184 CARMIL2Q6F5E8 1435 aa29.3■■■□□ 2.28
GSDMD-211ENST00000531184 CYB5RLQ6IPT4 315 aa29.27■■■□□ 2.28
GSDMD-211ENST00000531184 ARAP1Q96P48 1450 aa29.25■■■□□ 2.27
GSDMD-211ENST00000531184 SALL2Q9Y467 1007 aaPredicted RBP29.25■■■□□ 2.27
GSDMD-211ENST00000531184 KIAA0556O60303 1618 aa29.24■■■□□ 2.27
GSDMD-211ENST00000531184 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
GSDMD-211ENST00000531184 ITGAEP38570 1179 aa29.19■■■□□ 2.26
GSDMD-211ENST00000531184 SAMD9Q5K651 1589 aa29.18■■■□□ 2.26
GSDMD-211ENST00000531184 PTPRGP23470 1445 aa29.17■■■□□ 2.26
GSDMD-211ENST00000531184 ARHGAP35Q9NRY4 1499 aa29.16■■■□□ 2.26
GSDMD-211ENST00000531184 FHOD3Q2V2M9 1422 aa29.16■■■□□ 2.26
GSDMD-211ENST00000531184 KCNH8Q96L42 1107 aa29.14■■■□□ 2.26
GSDMD-211ENST00000531184 CLIP1P30622 1438 aa29.14■■■□□ 2.26
GSDMD-211ENST00000531184 EFCAB5A4FU69 1503 aa29.12■■■□□ 2.25
GSDMD-211ENST00000531184 CDK11AQ9UQ88 783 aaPredicted RBP29.09■■■□□ 2.25
GSDMD-211ENST00000531184 DHX57Q6P158 1386 aaKnown RBP29.04■■■□□ 2.24
GSDMD-211ENST00000531184 PLB1Q6P1J6 1458 aa29.01■■■□□ 2.23
GSDMD-211ENST00000531184 UACAQ9BZF9 1416 aa28.96■■■□□ 2.23
GSDMD-211ENST00000531184 CCDC136Q96JN2 1154 aa28.95■■■□□ 2.22
GSDMD-211ENST00000531184 ARID3CA6NKF2 412 aa28.92■■■□□ 2.22
GSDMD-211ENST00000531184 ADCY10Q96PN6 1610 aa28.91■■■□□ 2.22
GSDMD-211ENST00000531184 FMN1Q68DA7 1419 aa28.9■■■□□ 2.22
GSDMD-211ENST00000531184 ABCA8O94911 1581 aa28.89■■■□□ 2.22
GSDMD-211ENST00000531184 ATP1B4Q9UN42 357 aaPredicted RBP28.88■■■□□ 2.21
GSDMD-211ENST00000531184 ABCC2Q92887 1545 aa28.87■■■□□ 2.21
GSDMD-211ENST00000531184 NOP58Q9Y2X3 529 aaKnown RBP28.85■■■□□ 2.21
GSDMD-211ENST00000531184 UHRF1BP1LA0JNW5 1464 aa28.84■■■□□ 2.21
GSDMD-211ENST00000531184 RAPGEF6Q8TEU7 1601 aa28.83■■■□□ 2.21
GSDMD-211ENST00000531184 NPM1P06748 294 aaKnown RBP eCLIP28.81■■■□□ 2.2
GSDMD-211ENST00000531184 CCER2I3L3R5 266 aa28.79■■■□□ 2.2
GSDMD-211ENST00000531184 NUP153P49790 1475 aaKnown RBP28.78■■■□□ 2.2
GSDMD-211ENST00000531184 NBR1Q14596 966 aa28.75■■■□□ 2.19
GSDMD-211ENST00000531184 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
GSDMD-211ENST00000531184 IL27Q8NEV9 243 aa28.75■■■□□ 2.19
GSDMD-211ENST00000531184 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
GSDMD-211ENST00000531184 CASKIN1Q8WXD9 1431 aa28.73■■■□□ 2.19
GSDMD-211ENST00000531184 ATP10BO94823 1461 aa28.72■■■□□ 2.19
GSDMD-211ENST00000531184 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
GSDMD-211ENST00000531184 TRIM52Q96A61 297 aa28.69■■■□□ 2.18
GSDMD-211ENST00000531184 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
GSDMD-211ENST00000531184 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.68■■■□□ 2.18
GSDMD-211ENST00000531184 HECW1Q76N89 1606 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms