RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 FANCIQ9NVI1 1328 aa25.64■■□□□ 1.69
RPL38-205ENST00000530646 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
RPL38-205ENST00000530646 ERICH6Q7L0X2 663 aa25.63■■□□□ 1.69
RPL38-205ENST00000530646 RRBP1Q9P2E9 1410 aaKnown RBP25.63■■□□□ 1.69
RPL38-205ENST00000530646 DDX10Q13206 875 aaKnown RBP25.63■■□□□ 1.69
RPL38-205ENST00000530646 KANK4Q5T7N3 995 aaPredicted RBP25.62■■□□□ 1.69
RPL38-205ENST00000530646 RAD54L2Q9Y4B4 1467 aa25.62■■□□□ 1.69
RPL38-205ENST00000530646 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
RPL38-205ENST00000530646 TRIM52Q96A61 297 aa25.58■■□□□ 1.69
RPL38-205ENST00000530646 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
RPL38-205ENST00000530646 URB2Q14146 1524 aaKnown RBP25.56■■□□□ 1.68
RPL38-205ENST00000530646 MAPKBP1O60336 1514 aa25.55■■□□□ 1.68
RPL38-205ENST00000530646 DNMBPQ6XZF7 1577 aa25.55■■□□□ 1.68
RPL38-205ENST00000530646 PPP1R15AO75807 674 aaPredicted RBP25.55■■□□□ 1.68
RPL38-205ENST00000530646 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
RPL38-205ENST00000530646 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
RPL38-205ENST00000530646 KIF21AQ7Z4S6 1674 aa25.53■■□□□ 1.68
RPL38-205ENST00000530646 IGF1RP08069 1367 aa25.51■■□□□ 1.67
RPL38-205ENST00000530646 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
RPL38-205ENST00000530646 CCER2I3L3R5 266 aa25.5■■□□□ 1.67
RPL38-205ENST00000530646 WDR97A6NE52 1622 aa25.49■■□□□ 1.67
RPL38-205ENST00000530646 ANO8Q9HCE9 1232 aaPredicted RBP25.48■■□□□ 1.67
RPL38-205ENST00000530646 CCNB3Q8WWL7 1395 aa25.47■■□□□ 1.67
RPL38-205ENST00000530646 DEKP35659 375 aaKnown RBP25.44■■□□□ 1.66
RPL38-205ENST00000530646 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
RPL38-205ENST00000530646 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
RPL38-205ENST00000530646 CDK11AQ9UQ88 783 aaPredicted RBP25.42■■□□□ 1.66
RPL38-205ENST00000530646 MYT1LQ9UL68 1186 aa25.41■■□□□ 1.66
RPL38-205ENST00000530646 CARMIL1Q5VZK9 1371 aa25.37■■□□□ 1.65
RPL38-205ENST00000530646 TDRD9Q8NDG6 1382 aaKnown RBP25.37■■□□□ 1.65
RPL38-205ENST00000530646 ANP32CO43423 234 aa25.37■■□□□ 1.65
RPL38-205ENST00000530646 ABCA10Q8WWZ4 1543 aa25.35■■□□□ 1.65
RPL38-205ENST00000530646 SIN3AQ96ST3 1273 aa25.32■■□□□ 1.64
RPL38-205ENST00000530646 HIRIP3Q9BW71 556 aaPredicted RBP25.31■■□□□ 1.64
RPL38-205ENST00000530646 IRX6P78412 446 aaPredicted RBP25.29■■□□□ 1.64
RPL38-205ENST00000530646 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
RPL38-205ENST00000530646 SALL2Q9Y467 1007 aaPredicted RBP25.21■■□□□ 1.63
RPL38-205ENST00000530646 TIMELESSQ9UNS1 1208 aa25.19■■□□□ 1.62
RPL38-205ENST00000530646 MRC2Q9UBG0 1479 aa25.18■■□□□ 1.62
RPL38-205ENST00000530646 P3H3Q8IVL6 736 aa25.16■■□□□ 1.62
RPL38-205ENST00000530646 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
RPL38-205ENST00000530646 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
RPL38-205ENST00000530646 HNRNPUQ00839 825 aaKnown RBP eCLIP25.15■■□□□ 1.62
RPL38-205ENST00000530646 TARBP1Q13395 1621 aaKnown RBP25.14■■□□□ 1.61
RPL38-205ENST00000530646 ERICH6BQ5W0A0 696 aa25.13■■□□□ 1.61
RPL38-205ENST00000530646 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.619e-8■■■■■ 38.3
RPL38-205ENST00000530646 ERCC6Q03468 1493 aa25.13■■□□□ 1.61
RPL38-205ENST00000530646 PPP4R2Q9NY27 417 aa25.12■■□□□ 1.61
RPL38-205ENST00000530646 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
RPL38-205ENST00000530646 NOP58Q9Y2X3 529 aaKnown RBP25.06■■□□□ 1.6
RPL38-205ENST00000530646 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
RPL38-205ENST00000530646 NBR1Q14596 966 aa25.04■■□□□ 1.6
RPL38-205ENST00000530646 PAK3O75914 559 aaPredicted RBP25.02■■□□□ 1.6
RPL38-205ENST00000530646 CCDC136Q96JN2 1154 aa25.02■■□□□ 1.6
RPL38-205ENST00000530646 CUL7Q14999 1698 aa25.02■■□□□ 1.6
RPL38-205ENST00000530646 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
RPL38-205ENST00000530646 WDR62O43379 1518 aa24.99■■□□□ 1.59
RPL38-205ENST00000530646 PHLDB1Q86UU1 1377 aa24.98■■□□□ 1.59
RPL38-205ENST00000530646 B4GALNT3Q6L9W6 998 aa24.97■■□□□ 1.59
RPL38-205ENST00000530646 MAP3K1Q13233 1512 aa24.97■■□□□ 1.59
RPL38-205ENST00000530646 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
RPL38-205ENST00000530646 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
RPL38-205ENST00000530646 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
RPL38-205ENST00000530646 LRRC9Q6ZRR7 1453 aa24.92■■□□□ 1.58
RPL38-205ENST00000530646 IL27Q8NEV9 243 aa24.91■■□□□ 1.58
RPL38-205ENST00000530646 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
RPL38-205ENST00000530646 THOC2Q8NI27 1593 aaKnown RBP24.9■■□□□ 1.58
RPL38-205ENST00000530646 TONSLQ96HA7 1378 aa24.89■■□□□ 1.57
RPL38-205ENST00000530646 IFT140Q96RY7 1462 aa24.88■■□□□ 1.57
RPL38-205ENST00000530646 CTTNBP2Q8WZ74 1663 aa24.87■■□□□ 1.57
RPL38-205ENST00000530646 UBE2Q2Q8WVN8 375 aa24.86■■□□□ 1.57
RPL38-205ENST00000530646 GRIN2BQ13224 1484 aa24.83■■□□□ 1.56
RPL38-205ENST00000530646 CCDC184Q52MB2 194 aa24.82■■□□□ 1.56
RPL38-205ENST00000530646 FHAD1B1AJZ9 1412 aa24.8■■□□□ 1.56
RPL38-205ENST00000530646 RTN4Q9NQC3 1192 aaKnown RBP24.79■■□□□ 1.56
RPL38-205ENST00000530646 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.79■■□□□ 1.56
RPL38-205ENST00000530646 EIF4G3O43432 1585 aaKnown RBP24.78■■□□□ 1.56
RPL38-205ENST00000530646 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
RPL38-205ENST00000530646 IPO9Q96P70 1041 aaKnown RBP24.77■■□□□ 1.56
RPL38-205ENST00000530646 WASHC2AQ641Q2 1341 aa24.77■■□□□ 1.56
RPL38-205ENST00000530646 RTL5Q5HYW3 569 aaPredicted RBP24.76■■□□□ 1.55
RPL38-205ENST00000530646 SNAPC4Q5SXM2 1469 aa24.76■■□□□ 1.55
RPL38-205ENST00000530646 PCF11O94913 1555 aaKnown RBP24.76■■□□□ 1.55
RPL38-205ENST00000530646 KDM5BQ9UGL1 1544 aa24.74■■□□□ 1.55
RPL38-205ENST00000530646 FBLN2P98095 1184 aa24.73■■□□□ 1.55
RPL38-205ENST00000530646 CFAP43Q8NDM7 1665 aa24.73■■□□□ 1.55
RPL38-205ENST00000530646 ZBED9Q6R2W3 1325 aa24.73■■□□□ 1.55
RPL38-205ENST00000530646 ANP32AP39687 249 aaKnown RBP24.71■■□□□ 1.55
RPL38-205ENST00000530646 EFCAB5A4FU69 1503 aa24.69■■□□□ 1.54
RPL38-205ENST00000530646 ZBTB47Q9UFB7 747 aaPredicted RBP24.69■■□□□ 1.54
RPL38-205ENST00000530646 FAM9BQ8IZU0 186 aa24.69■■□□□ 1.54
RPL38-205ENST00000530646 NCOA2Q15596 1464 aa24.68■■□□□ 1.54
RPL38-205ENST00000530646 HSPA5P11021 654 aaKnown RBP24.67■■□□□ 1.54
RPL38-205ENST00000530646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.67■■□□□ 1.54
RPL38-205ENST00000530646 CCDC18Q5T9S5 1454 aa24.67■■□□□ 1.54
RPL38-205ENST00000530646 CNTLNQ9NXG0 1405 aa24.66■■□□□ 1.54
RPL38-205ENST00000530646 UACAQ9BZF9 1416 aa24.65■■□□□ 1.54
RPL38-205ENST00000530646 SAMD9Q5K651 1589 aa24.64■■□□□ 1.53
RPL38-205ENST00000530646 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
RPL38-205ENST00000530646 PRKRIP1Q9H875 184 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms