RNA–Protein interactions for RNA: ENST00000528316.5

AP003555.1-201, humanhuman

TSL 3

Gene AP003555.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-201ENST00000528316 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
AP003555.1-201ENST00000528316 ZBTB22O15209 634 aa15.43■□□□□ 0.06
AP003555.1-201ENST00000528316 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
AP003555.1-201ENST00000528316 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
AP003555.1-201ENST00000528316 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
AP003555.1-201ENST00000528316 PRKAR2AP13861 404 aaKnown RBP15.36■□□□□ 0.05
AP003555.1-201ENST00000528316 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
AP003555.1-201ENST00000528316 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
AP003555.1-201ENST00000528316 C19orf67A6NJJ6 358 aa15.31■□□□□ 0.04
AP003555.1-201ENST00000528316 FBLN2P98095 1184 aa15.26■□□□□ 0.03
AP003555.1-201ENST00000528316 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
AP003555.1-201ENST00000528316 SPDYE1Q8NFV5 336 aaPredicted RBP15.25■□□□□ 0.03
AP003555.1-201ENST00000528316 GABBR2O75899 941 aa15.22■□□□□ 0.03
AP003555.1-201ENST00000528316 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
AP003555.1-201ENST00000528316 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
AP003555.1-201ENST00000528316 TOPBP1Q92547 1522 aa15.19■□□□□ 0.02
AP003555.1-201ENST00000528316 SUPT5HO00267 1087 aaKnown RBP15.19■□□□□ 0.02
AP003555.1-201ENST00000528316 SSUH2Q9Y2M2 353 aa15.18■□□□□ 0.02
AP003555.1-201ENST00000528316 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
AP003555.1-201ENST00000528316 IFT140Q96RY7 1462 aa15.16■□□□□ 0.02
AP003555.1-201ENST00000528316 LHX8Q68G74 356 aa15.14■□□□□ 0.01
AP003555.1-201ENST00000528316 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
AP003555.1-201ENST00000528316 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
AP003555.1-201ENST00000528316 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
AP003555.1-201ENST00000528316 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
AP003555.1-201ENST00000528316 CHADLQ6NUI6 762 aa15.09■□□□□ 0.01
AP003555.1-201ENST00000528316 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0
AP003555.1-201ENST00000528316 POLA1P09884 1462 aaPredicted RBP15.06■□□□□ 0
AP003555.1-201ENST00000528316 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ -0
AP003555.1-201ENST00000528316 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
AP003555.1-201ENST00000528316 SOGA1O94964 1423 aa15.02■□□□□ -0
AP003555.1-201ENST00000528316 TDRD9Q8NDG6 1382 aaKnown RBP15.01□□□□□ -0.01
AP003555.1-201ENST00000528316 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
AP003555.1-201ENST00000528316 CUX1P39880 1505 aa14.99□□□□□ -0.01
AP003555.1-201ENST00000528316 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
AP003555.1-201ENST00000528316 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
AP003555.1-201ENST00000528316 PRR29P0C7W0 189 aa14.93□□□□□ -0.02
AP003555.1-201ENST00000528316 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
AP003555.1-201ENST00000528316 RIMBP3CA6NJZ7 1639 aa14.88□□□□□ -0.03
AP003555.1-201ENST00000528316 RIMBP3BA6NNM3 1639 aa14.88□□□□□ -0.03
AP003555.1-201ENST00000528316 RIMBP3Q9UFD9 1639 aa14.88□□□□□ -0.03
AP003555.1-201ENST00000528316 SNAPC4Q5SXM2 1469 aa14.87□□□□□ -0.03
AP003555.1-201ENST00000528316 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
AP003555.1-201ENST00000528316 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
AP003555.1-201ENST00000528316 CHD1O14646 1710 aa14.85□□□□□ -0.03
AP003555.1-201ENST00000528316 GRIN2BQ13224 1484 aa14.83□□□□□ -0.03
AP003555.1-201ENST00000528316 CD44P16070 742 aaKnown RBP14.83□□□□□ -0.04
AP003555.1-201ENST00000528316 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
AP003555.1-201ENST00000528316 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
AP003555.1-201ENST00000528316 MAGI1Q96QZ7 1491 aaPredicted RBP14.8□□□□□ -0.04
AP003555.1-201ENST00000528316 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
AP003555.1-201ENST00000528316 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
AP003555.1-201ENST00000528316 FARP1Q9Y4F1 1045 aaPredicted RBP14.79□□□□□ -0.04
AP003555.1-201ENST00000528316 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
AP003555.1-201ENST00000528316 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
AP003555.1-201ENST00000528316 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
AP003555.1-201ENST00000528316 ARAP1Q96P48 1450 aa14.74□□□□□ -0.05
AP003555.1-201ENST00000528316 TOP2BQ02880 1626 aa14.73□□□□□ -0.05
AP003555.1-201ENST00000528316 CLASP1Q7Z460 1538 aa14.72□□□□□ -0.05
AP003555.1-201ENST00000528316 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
AP003555.1-201ENST00000528316 BIVM-ERCC5R4GMW8 1640 aa14.7□□□□□ -0.06
AP003555.1-201ENST00000528316 CLCN6P51797 869 aa14.7□□□□□ -0.06
AP003555.1-201ENST00000528316 PBRM1Q86U86 1689 aa14.7□□□□□ -0.06
AP003555.1-201ENST00000528316 GRIN2AQ12879 1464 aa14.64□□□□□ -0.07
AP003555.1-201ENST00000528316 FHAD1B1AJZ9 1412 aa14.63□□□□□ -0.07
AP003555.1-201ENST00000528316 DCBLD2Q96PD2 775 aa14.61□□□□□ -0.07
AP003555.1-201ENST00000528316 PLSCR2Q9NRY7 297 aa14.61□□□□□ -0.07
AP003555.1-201ENST00000528316 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
AP003555.1-201ENST00000528316 NUP160Q12769 1436 aa14.59□□□□□ -0.07
AP003555.1-201ENST00000528316 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
AP003555.1-201ENST00000528316 ERICH3Q5RHP9 1530 aa14.59□□□□□ -0.07
AP003555.1-201ENST00000528316 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
AP003555.1-201ENST00000528316 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
AP003555.1-201ENST00000528316 IGF1RP08069 1367 aa14.54□□□□□ -0.08
AP003555.1-201ENST00000528316 JPH4Q96JJ6 628 aa14.53□□□□□ -0.08
AP003555.1-201ENST00000528316 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
AP003555.1-201ENST00000528316 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
AP003555.1-201ENST00000528316 CREBZFQ9NS37 354 aa14.5□□□□□ -0.09
AP003555.1-201ENST00000528316 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
AP003555.1-201ENST00000528316 PRG4Q92954 1404 aaPredicted RBP14.49□□□□□ -0.09
AP003555.1-201ENST00000528316 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
AP003555.1-201ENST00000528316 OTUD5Q96G74 571 aa14.48□□□□□ -0.09
AP003555.1-201ENST00000528316 SHROOM2Q13796 1616 aa14.46□□□□□ -0.09
AP003555.1-201ENST00000528316 POTEB2H3BUK9 544 aa14.45□□□□□ -0.1
AP003555.1-201ENST00000528316 CARMIL1Q5VZK9 1371 aa14.43□□□□□ -0.1
AP003555.1-201ENST00000528316 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
AP003555.1-201ENST00000528316 KIAA0586Q9BVV6 1533 aa14.39□□□□□ -0.11
AP003555.1-201ENST00000528316 CUL7Q14999 1698 aa14.36□□□□□ -0.11
AP003555.1-201ENST00000528316 TTBK1Q5TCY1 1321 aaPredicted RBP14.34□□□□□ -0.11
AP003555.1-201ENST00000528316 NPM1P06748 294 aaKnown RBP eCLIP14.31□□□□□ -0.12
AP003555.1-201ENST00000528316 PHF12Q96QT6 1004 aa14.31□□□□□ -0.12
AP003555.1-201ENST00000528316 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
AP003555.1-201ENST00000528316 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
AP003555.1-201ENST00000528316 POTEMA6NI47 508 aa14.28□□□□□ -0.12
AP003555.1-201ENST00000528316 PTPRGP23470 1445 aa14.27□□□□□ -0.12
AP003555.1-201ENST00000528316 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.13
AP003555.1-201ENST00000528316 RAPGEF2Q9Y4G8 1499 aa14.26□□□□□ -0.13
AP003555.1-201ENST00000528316 TNIKQ9UKE5 1360 aa14.24□□□□□ -0.13
AP003555.1-201ENST00000528316 ADCY10Q96PN6 1610 aa14.24□□□□□ -0.13
AP003555.1-201ENST00000528316 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms