RNA–Protein interactions for RNA: ENST00000528316.5

AP003555.1-201, humanhuman

TSL 3

Gene AP003555.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-201ENST00000528316 AEBP2Q6ZN18 517 aaPredicted RBP29.27■■■□□ 2.28
AP003555.1-201ENST00000528316 CHIC1Q5VXU3 224 aa27.21■■□□□ 1.95
AP003555.1-201ENST00000528316 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
AP003555.1-201ENST00000528316 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
AP003555.1-201ENST00000528316 FOXD1Q16676 465 aa23.38■■□□□ 1.33
AP003555.1-201ENST00000528316 POTEDQ86YR6 584 aa22.55■■□□□ 1.2
AP003555.1-201ENST00000528316 MSH5O43196 834 aa22.02■■□□□ 1.12
AP003555.1-201ENST00000528316 PIAS4Q8N2W9 510 aaPredicted RBP21.65■■□□□ 1.06
AP003555.1-201ENST00000528316 PPP6R1Q9UPN7 881 aa21.47■■□□□ 1.03
AP003555.1-201ENST00000528316 PLPPR3Q6T4P5 718 aa21.39■■□□□ 1.01
AP003555.1-201ENST00000528316 ADRA2BP18089 450 aa21.32■■□□□ 1
AP003555.1-201ENST00000528316 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
AP003555.1-201ENST00000528316 MAPK8IP2Q13387 824 aaPredicted RBP19.78■□□□□ 0.76
AP003555.1-201ENST00000528316 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
AP003555.1-201ENST00000528316 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
AP003555.1-201ENST00000528316 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
AP003555.1-201ENST00000528316 DCAF8L1A6NGE4 600 aa18.87■□□□□ 0.61
AP003555.1-201ENST00000528316 RNF39Q9H2S5 420 aa18.8■□□□□ 0.6
AP003555.1-201ENST00000528316 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
AP003555.1-201ENST00000528316 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
AP003555.1-201ENST00000528316 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
AP003555.1-201ENST00000528316 RNF216Q9NWF9 866 aaPredicted RBP18.46■□□□□ 0.55
AP003555.1-201ENST00000528316 ABCC9O60706 1549 aa18.44■□□□□ 0.54
AP003555.1-201ENST00000528316 C1QBPQ07021 282 aaKnown RBP18.44■□□□□ 0.54
AP003555.1-201ENST00000528316 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
AP003555.1-201ENST00000528316 DNAJC5BQ9UF47 199 aa18.23■□□□□ 0.51
AP003555.1-201ENST00000528316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.44
AP003555.1-201ENST00000528316 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
AP003555.1-201ENST00000528316 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
AP003555.1-201ENST00000528316 DCAF8L2P0C7V8 631 aa17.57■□□□□ 0.4
AP003555.1-201ENST00000528316 POTEHQ6S545 545 aa17.53■□□□□ 0.4
AP003555.1-201ENST00000528316 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.39
AP003555.1-201ENST00000528316 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
AP003555.1-201ENST00000528316 NACADO15069 1562 aa17.43■□□□□ 0.38
AP003555.1-201ENST00000528316 DSG3P32926 999 aa17.41■□□□□ 0.38
AP003555.1-201ENST00000528316 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
AP003555.1-201ENST00000528316 CAPN15O75808 1086 aa17.31■□□□□ 0.36
AP003555.1-201ENST00000528316 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
AP003555.1-201ENST00000528316 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
AP003555.1-201ENST00000528316 ZCCHC6Q5VYS8 1495 aaKnown RBP17.15■□□□□ 0.34
AP003555.1-201ENST00000528316 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
AP003555.1-201ENST00000528316 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
AP003555.1-201ENST00000528316 BICRAQ9NZM4 1560 aa17.04■□□□□ 0.32
AP003555.1-201ENST00000528316 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
AP003555.1-201ENST00000528316 ABCB7O75027 752 aa16.9■□□□□ 0.3
AP003555.1-201ENST00000528316 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
AP003555.1-201ENST00000528316 SCRIBQ14160 1630 aa16.87■□□□□ 0.29
AP003555.1-201ENST00000528316 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
AP003555.1-201ENST00000528316 APLP2Q06481 763 aa16.77■□□□□ 0.28
AP003555.1-201ENST00000528316 KCNA4P22459 653 aa16.74■□□□□ 0.27
AP003555.1-201ENST00000528316 SHROOM4Q9ULL8 1493 aa16.73■□□□□ 0.27
AP003555.1-201ENST00000528316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
AP003555.1-201ENST00000528316 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
AP003555.1-201ENST00000528316 EIF4G1Q04637 1599 aaKnown RBP16.61■□□□□ 0.25
AP003555.1-201ENST00000528316 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
AP003555.1-201ENST00000528316 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
AP003555.1-201ENST00000528316 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
AP003555.1-201ENST00000528316 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
AP003555.1-201ENST00000528316 CHRDL2Q6WN34 429 aa16.46■□□□□ 0.23
AP003555.1-201ENST00000528316 POLA2Q14181 598 aa16.34■□□□□ 0.21
AP003555.1-201ENST00000528316 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
AP003555.1-201ENST00000528316 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
AP003555.1-201ENST00000528316 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
AP003555.1-201ENST00000528316 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
AP003555.1-201ENST00000528316 AKT1S1Q96B36 256 aa16.08■□□□□ 0.16
AP003555.1-201ENST00000528316 SMARCA4P51532 1647 aa16.08■□□□□ 0.16
AP003555.1-201ENST00000528316 SMARCA2P51531 1590 aa16.02■□□□□ 0.16
AP003555.1-201ENST00000528316 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
AP003555.1-201ENST00000528316 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
AP003555.1-201ENST00000528316 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
AP003555.1-201ENST00000528316 MROH2BQ7Z745 1585 aa15.97■□□□□ 0.15
AP003555.1-201ENST00000528316 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
AP003555.1-201ENST00000528316 REM2Q8IYK8 340 aaPredicted RBP15.96■□□□□ 0.15
AP003555.1-201ENST00000528316 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
AP003555.1-201ENST00000528316 PEG3Q9GZU2 1588 aa15.91■□□□□ 0.14
AP003555.1-201ENST00000528316 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
AP003555.1-201ENST00000528316 NESP48681 1621 aa15.89■□□□□ 0.13
AP003555.1-201ENST00000528316 ERCC6Q03468 1493 aa15.88■□□□□ 0.13
AP003555.1-201ENST00000528316 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
AP003555.1-201ENST00000528316 PITPNM1O00562 1244 aa15.8■□□□□ 0.12
AP003555.1-201ENST00000528316 FXR2P51116 673 aaKnown RBP eCLIP15.79■□□□□ 0.12
AP003555.1-201ENST00000528316 HAX1O00165 279 aa15.78■□□□□ 0.12
AP003555.1-201ENST00000528316 CUX2O14529 1486 aa15.78■□□□□ 0.12
AP003555.1-201ENST00000528316 WIZO95785 1651 aa15.76■□□□□ 0.11
AP003555.1-201ENST00000528316 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
AP003555.1-201ENST00000528316 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
AP003555.1-201ENST00000528316 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
AP003555.1-201ENST00000528316 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
AP003555.1-201ENST00000528316 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
AP003555.1-201ENST00000528316 PDS5BQ9NTI5 1447 aa15.67■□□□□ 0.1
AP003555.1-201ENST00000528316 EVX2Q03828 476 aa15.66■□□□□ 0.1
AP003555.1-201ENST00000528316 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
AP003555.1-201ENST00000528316 THOC2Q8NI27 1593 aaKnown RBP15.61■□□□□ 0.09
AP003555.1-201ENST00000528316 KIF21AQ7Z4S6 1674 aa15.59■□□□□ 0.09
AP003555.1-201ENST00000528316 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
AP003555.1-201ENST00000528316 CFTRP13569 1480 aa15.51■□□□□ 0.07
AP003555.1-201ENST00000528316 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
AP003555.1-201ENST00000528316 FANCD2Q9BXW9 1451 aa15.48■□□□□ 0.07
AP003555.1-201ENST00000528316 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
AP003555.1-201ENST00000528316 WDR62O43379 1518 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms