RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 EVX2Q03828 476 aa13.88□□□□□ -0.19
NECTIN1-204ENST00000524429 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
NECTIN1-204ENST00000524429 FBLN2P98095 1184 aa13.84□□□□□ -0.19
NECTIN1-204ENST00000524429 CFTRP13569 1480 aa13.84□□□□□ -0.19
NECTIN1-204ENST00000524429 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.2
NECTIN1-204ENST00000524429 CADPSQ9ULU8 1353 aa13.78□□□□□ -0.2
NECTIN1-204ENST00000524429 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
NECTIN1-204ENST00000524429 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
NECTIN1-204ENST00000524429 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
NECTIN1-204ENST00000524429 KIF21AQ7Z4S6 1674 aa13.76□□□□□ -0.21
NECTIN1-204ENST00000524429 CLEC11AQ9Y240 323 aa13.73□□□□□ -0.21
NECTIN1-204ENST00000524429 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
NECTIN1-204ENST00000524429 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
NECTIN1-204ENST00000524429 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
NECTIN1-204ENST00000524429 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
NECTIN1-204ENST00000524429 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
NECTIN1-204ENST00000524429 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
NECTIN1-204ENST00000524429 WDR62O43379 1518 aa13.61□□□□□ -0.23
NECTIN1-204ENST00000524429 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
NECTIN1-204ENST00000524429 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
NECTIN1-204ENST00000524429 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
NECTIN1-204ENST00000524429 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
NECTIN1-204ENST00000524429 WRNQ14191 1432 aaPredicted RBP eCLIP13.57□□□□□ -0.24
NECTIN1-204ENST00000524429 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
NECTIN1-204ENST00000524429 MKRN4PQ13434 485 aaPredicted RBP13.57□□□□□ -0.24
NECTIN1-204ENST00000524429 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
NECTIN1-204ENST00000524429 DNMBPQ6XZF7 1577 aa13.56□□□□□ -0.24
NECTIN1-204ENST00000524429 CUX1P39880 1505 aa13.54□□□□□ -0.24
NECTIN1-204ENST00000524429 GABBR2O75899 941 aa13.52□□□□□ -0.25
NECTIN1-204ENST00000524429 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
NECTIN1-204ENST00000524429 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
NECTIN1-204ENST00000524429 RIMBP3CA6NJZ7 1639 aa13.5□□□□□ -0.25
NECTIN1-204ENST00000524429 RIMBP3BA6NNM3 1639 aa13.5□□□□□ -0.25
NECTIN1-204ENST00000524429 RIMBP3Q9UFD9 1639 aa13.5□□□□□ -0.25
NECTIN1-204ENST00000524429 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
NECTIN1-204ENST00000524429 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
NECTIN1-204ENST00000524429 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
NECTIN1-204ENST00000524429 LHX8Q68G74 356 aa13.42□□□□□ -0.26
NECTIN1-204ENST00000524429 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
NECTIN1-204ENST00000524429 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
NECTIN1-204ENST00000524429 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
NECTIN1-204ENST00000524429 POLA1P09884 1462 aaPredicted RBP13.39□□□□□ -0.27
NECTIN1-204ENST00000524429 TARBP1Q13395 1621 aaKnown RBP13.38□□□□□ -0.27
NECTIN1-204ENST00000524429 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
NECTIN1-204ENST00000524429 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
NECTIN1-204ENST00000524429 EEA1Q15075 1411 aa13.33□□□□□ -0.28
NECTIN1-204ENST00000524429 IFT140Q96RY7 1462 aa13.31□□□□□ -0.28
NECTIN1-204ENST00000524429 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
NECTIN1-204ENST00000524429 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
NECTIN1-204ENST00000524429 FKBP8Q14318 412 aa13.29□□□□□ -0.28
NECTIN1-204ENST00000524429 SOGA1O94964 1423 aa13.29□□□□□ -0.28
NECTIN1-204ENST00000524429 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
NECTIN1-204ENST00000524429 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
NECTIN1-204ENST00000524429 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
NECTIN1-204ENST00000524429 ARAP1Q96P48 1450 aa13.25□□□□□ -0.29
NECTIN1-204ENST00000524429 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
NECTIN1-204ENST00000524429 CUL7Q14999 1698 aa13.23□□□□□ -0.29
NECTIN1-204ENST00000524429 EIF4G3O43432 1585 aaKnown RBP13.23□□□□□ -0.29
NECTIN1-204ENST00000524429 ERICH3Q5RHP9 1530 aa13.22□□□□□ -0.29
NECTIN1-204ENST00000524429 KIF21BO75037 1637 aa13.21□□□□□ -0.29
NECTIN1-204ENST00000524429 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
NECTIN1-204ENST00000524429 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
NECTIN1-204ENST00000524429 RUSC2Q8N2Y8 1516 aa13.2□□□□□ -0.3
NECTIN1-204ENST00000524429 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
NECTIN1-204ENST00000524429 CHD1O14646 1710 aa13.15□□□□□ -0.3
NECTIN1-204ENST00000524429 GRIN2BQ13224 1484 aa13.14□□□□□ -0.31
NECTIN1-204ENST00000524429 PRXQ9BXM0 1461 aa13.14□□□□□ -0.31
NECTIN1-204ENST00000524429 ADAMTS12P58397 1594 aa13.13□□□□□ -0.31
NECTIN1-204ENST00000524429 IGF1RP08069 1367 aa13.12□□□□□ -0.31
NECTIN1-204ENST00000524429 TDRD9Q8NDG6 1382 aaKnown RBP13.12□□□□□ -0.31
NECTIN1-204ENST00000524429 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
NECTIN1-204ENST00000524429 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
NECTIN1-204ENST00000524429 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
NECTIN1-204ENST00000524429 GOLGA3Q08378 1498 aa13.08□□□□□ -0.32
NECTIN1-204ENST00000524429 CTTNBP2Q8WZ74 1663 aa13.07□□□□□ -0.32
NECTIN1-204ENST00000524429 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
NECTIN1-204ENST00000524429 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
NECTIN1-204ENST00000524429 CLCN6P51797 869 aa13.05□□□□□ -0.32
NECTIN1-204ENST00000524429 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
NECTIN1-204ENST00000524429 SNAPC4Q5SXM2 1469 aa13.04□□□□□ -0.32
NECTIN1-204ENST00000524429 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
NECTIN1-204ENST00000524429 FAM9AQ8IZU1 332 aaPredicted RBP13.02□□□□□ -0.33
NECTIN1-204ENST00000524429 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
NECTIN1-204ENST00000524429 CLASP1Q7Z460 1538 aa13□□□□□ -0.33
NECTIN1-204ENST00000524429 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
NECTIN1-204ENST00000524429 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
NECTIN1-204ENST00000524429 GRIN2AQ12879 1464 aa12.98□□□□□ -0.33
NECTIN1-204ENST00000524429 TNIKQ9UKE5 1360 aa12.96□□□□□ -0.33
NECTIN1-204ENST00000524429 ZNF579Q8NAF0 562 aaKnown RBP12.96□□□□□ -0.33
NECTIN1-204ENST00000524429 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
NECTIN1-204ENST00000524429 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
NECTIN1-204ENST00000524429 NUP160Q12769 1436 aa12.92□□□□□ -0.34
NECTIN1-204ENST00000524429 CEP170Q5SW79 1584 aa12.92□□□□□ -0.34
NECTIN1-204ENST00000524429 IQGAP2Q13576 1575 aa12.91□□□□□ -0.34
NECTIN1-204ENST00000524429 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
NECTIN1-204ENST00000524429 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
NECTIN1-204ENST00000524429 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
NECTIN1-204ENST00000524429 EFCAB5A4FU69 1503 aa12.88□□□□□ -0.35
NECTIN1-204ENST00000524429 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
NECTIN1-204ENST00000524429 SAMD9Q5K651 1589 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms