RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
NECTIN1-204ENST00000524429 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
NECTIN1-204ENST00000524429 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
NECTIN1-204ENST00000524429 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
NECTIN1-204ENST00000524429 FOXD1Q16676 465 aa20.74■□□□□ 0.91
NECTIN1-204ENST00000524429 POTEDQ86YR6 584 aa19.84■□□□□ 0.77
NECTIN1-204ENST00000524429 MSH5O43196 834 aa19.52■□□□□ 0.72
NECTIN1-204ENST00000524429 PIAS4Q8N2W9 510 aaPredicted RBP19.29■□□□□ 0.68
NECTIN1-204ENST00000524429 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
NECTIN1-204ENST00000524429 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
NECTIN1-204ENST00000524429 ADRA2BP18089 450 aa19.02■□□□□ 0.64
NECTIN1-204ENST00000524429 NISCHQ9Y2I1 1504 aa18.78■□□□□ 0.6
NECTIN1-204ENST00000524429 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
NECTIN1-204ENST00000524429 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
NECTIN1-204ENST00000524429 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
NECTIN1-204ENST00000524429 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
NECTIN1-204ENST00000524429 DCAF8L1A6NGE4 600 aa16.93■□□□□ 0.3
NECTIN1-204ENST00000524429 PPP4R3CPQ6ZMV5 832 aa16.74■□□□□ 0.27
NECTIN1-204ENST00000524429 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
NECTIN1-204ENST00000524429 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
NECTIN1-204ENST00000524429 RNF39Q9H2S5 420 aa16.63■□□□□ 0.25
NECTIN1-204ENST00000524429 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
NECTIN1-204ENST00000524429 ABCC9O60706 1549 aa16.45■□□□□ 0.22
NECTIN1-204ENST00000524429 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
NECTIN1-204ENST00000524429 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
NECTIN1-204ENST00000524429 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
NECTIN1-204ENST00000524429 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
NECTIN1-204ENST00000524429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.98■□□□□ 0.15
NECTIN1-204ENST00000524429 ZCCHC6Q5VYS8 1495 aaKnown RBP15.76■□□□□ 0.11
NECTIN1-204ENST00000524429 NPM3O75607 178 aaKnown RBP15.74■□□□□ 0.11
NECTIN1-204ENST00000524429 DCAF1Q9Y4B6 1507 aa15.66■□□□□ 0.1
NECTIN1-204ENST00000524429 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
NECTIN1-204ENST00000524429 U3KPZ7 1027 aaPredicted RBP15.54■□□□□ 0.08
NECTIN1-204ENST00000524429 CAPN15O75808 1086 aa15.5■□□□□ 0.07
NECTIN1-204ENST00000524429 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
NECTIN1-204ENST00000524429 NACADO15069 1562 aa15.49■□□□□ 0.07
NECTIN1-204ENST00000524429 POTEHQ6S545 545 aa15.47■□□□□ 0.07
NECTIN1-204ENST00000524429 DSG3P32926 999 aa15.46■□□□□ 0.07
NECTIN1-204ENST00000524429 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
NECTIN1-204ENST00000524429 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
NECTIN1-204ENST00000524429 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
NECTIN1-204ENST00000524429 KCNA4P22459 653 aa15.25■□□□□ 0.03
NECTIN1-204ENST00000524429 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
NECTIN1-204ENST00000524429 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
NECTIN1-204ENST00000524429 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
NECTIN1-204ENST00000524429 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
NECTIN1-204ENST00000524429 ABCB7O75027 752 aa15.11■□□□□ 0.01
NECTIN1-204ENST00000524429 APLP2Q06481 763 aa15.11■□□□□ 0.01
NECTIN1-204ENST00000524429 SCRIBQ14160 1630 aa15.06■□□□□ 0
NECTIN1-204ENST00000524429 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
NECTIN1-204ENST00000524429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
NECTIN1-204ENST00000524429 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
NECTIN1-204ENST00000524429 BICRAQ9NZM4 1560 aa14.99□□□□□ -0.01
NECTIN1-204ENST00000524429 DNAJC5Q9H3Z4 198 aa14.95□□□□□ -0.02
NECTIN1-204ENST00000524429 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
NECTIN1-204ENST00000524429 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
NECTIN1-204ENST00000524429 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
NECTIN1-204ENST00000524429 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
NECTIN1-204ENST00000524429 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
NECTIN1-204ENST00000524429 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
NECTIN1-204ENST00000524429 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
NECTIN1-204ENST00000524429 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
NECTIN1-204ENST00000524429 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
NECTIN1-204ENST00000524429 POLA2Q14181 598 aa14.63□□□□□ -0.07
NECTIN1-204ENST00000524429 CHRDL2Q6WN34 429 aa14.61□□□□□ -0.07
NECTIN1-204ENST00000524429 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
NECTIN1-204ENST00000524429 SMARCA4P51532 1647 aa14.52□□□□□ -0.08
NECTIN1-204ENST00000524429 PEG3Q9GZU2 1588 aa14.44□□□□□ -0.1
NECTIN1-204ENST00000524429 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
NECTIN1-204ENST00000524429 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
NECTIN1-204ENST00000524429 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
NECTIN1-204ENST00000524429 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
NECTIN1-204ENST00000524429 WIZO95785 1651 aa14.34□□□□□ -0.11
NECTIN1-204ENST00000524429 CUX2O14529 1486 aa14.34□□□□□ -0.11
NECTIN1-204ENST00000524429 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
NECTIN1-204ENST00000524429 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
NECTIN1-204ENST00000524429 ATF5Q9Y2D1 282 aaPredicted RBP14.29□□□□□ -0.12
NECTIN1-204ENST00000524429 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
NECTIN1-204ENST00000524429 HMGXB3Q12766 1538 aa14.27□□□□□ -0.12
NECTIN1-204ENST00000524429 ATAD2BQ9ULI0 1458 aa14.27□□□□□ -0.12
NECTIN1-204ENST00000524429 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
NECTIN1-204ENST00000524429 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
NECTIN1-204ENST00000524429 NCAPD3P42695 1498 aa14.23□□□□□ -0.13
NECTIN1-204ENST00000524429 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
NECTIN1-204ENST00000524429 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
NECTIN1-204ENST00000524429 PIP4P2Q8N4L2 257 aa14.18□□□□□ -0.14
NECTIN1-204ENST00000524429 BAZ1BQ9UIG0 1483 aaKnown RBP14.18□□□□□ -0.14
NECTIN1-204ENST00000524429 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
NECTIN1-204ENST00000524429 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
NECTIN1-204ENST00000524429 HAX1O00165 279 aa14.1□□□□□ -0.15
NECTIN1-204ENST00000524429 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
NECTIN1-204ENST00000524429 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
NECTIN1-204ENST00000524429 NESP48681 1621 aa14.01□□□□□ -0.17
NECTIN1-204ENST00000524429 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
NECTIN1-204ENST00000524429 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
NECTIN1-204ENST00000524429 PRDM2Q13029 1718 aa13.98□□□□□ -0.17
NECTIN1-204ENST00000524429 ZBTB22O15209 634 aa13.97□□□□□ -0.17
NECTIN1-204ENST00000524429 AMER1Q5JTC6 1135 aaPredicted RBP13.97□□□□□ -0.17
NECTIN1-204ENST00000524429 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.17
NECTIN1-204ENST00000524429 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms