RNA–Protein interactions for RNA: ENST00000524220.1

GABRA6-209, Transcript of gamma-aminobutyric acid type A receptor alpha6 subunit, humanhuman

TSL 4

Gene GABRA6, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA6-209ENST00000524220 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
GABRA6-209ENST00000524220 GABBR2O75899 941 aa11.3□□□□□ -0.6
GABRA6-209ENST00000524220 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
GABRA6-209ENST00000524220 NESP48681 1621 aa11.27□□□□□ -0.61
GABRA6-209ENST00000524220 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
GABRA6-209ENST00000524220 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
GABRA6-209ENST00000524220 SUPT5HO00267 1087 aaKnown RBP11.24□□□□□ -0.61
GABRA6-209ENST00000524220 LHX8Q68G74 356 aa11.23□□□□□ -0.61
GABRA6-209ENST00000524220 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.61
GABRA6-209ENST00000524220 CFTRP13569 1480 aa11.2□□□□□ -0.62
GABRA6-209ENST00000524220 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
GABRA6-209ENST00000524220 ERCC6Q03468 1493 aa11.19□□□□□ -0.62
GABRA6-209ENST00000524220 EHMT2Q96KQ7 1210 aa11.18□□□□□ -0.62
GABRA6-209ENST00000524220 THOC2Q8NI27 1593 aaKnown RBP11.16□□□□□ -0.62
GABRA6-209ENST00000524220 PDS5BQ9NTI5 1447 aa11.16□□□□□ -0.62
GABRA6-209ENST00000524220 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
GABRA6-209ENST00000524220 CEP164Q9UPV0 1460 aa11.12□□□□□ -0.63
GABRA6-209ENST00000524220 CD44P16070 742 aaKnown RBP11.09□□□□□ -0.63
GABRA6-209ENST00000524220 MRC2Q9UBG0 1479 aa11.07□□□□□ -0.64
GABRA6-209ENST00000524220 WDR62O43379 1518 aa11.07□□□□□ -0.64
GABRA6-209ENST00000524220 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
GABRA6-209ENST00000524220 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
GABRA6-209ENST00000524220 CUX2O14529 1486 aa11.04□□□□□ -0.64
GABRA6-209ENST00000524220 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
GABRA6-209ENST00000524220 DNMBPQ6XZF7 1577 aa11.01□□□□□ -0.65
GABRA6-209ENST00000524220 CLCN6P51797 869 aa10.97□□□□□ -0.65
GABRA6-209ENST00000524220 TOPBP1Q92547 1522 aa10.97□□□□□ -0.65
GABRA6-209ENST00000524220 ABCC8Q09428 1581 aa10.96□□□□□ -0.65
GABRA6-209ENST00000524220 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
GABRA6-209ENST00000524220 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
GABRA6-209ENST00000524220 CUX1P39880 1505 aa10.94□□□□□ -0.66
GABRA6-209ENST00000524220 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
GABRA6-209ENST00000524220 SYNJ1O43426 1573 aa10.91□□□□□ -0.66
GABRA6-209ENST00000524220 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
GABRA6-209ENST00000524220 WDR97A6NE52 1622 aa10.89□□□□□ -0.67
GABRA6-209ENST00000524220 TARBP1Q13395 1621 aaKnown RBP10.89□□□□□ -0.67
GABRA6-209ENST00000524220 POLA1P09884 1462 aaPredicted RBP10.88□□□□□ -0.67
GABRA6-209ENST00000524220 WRNQ14191 1432 aaPredicted RBP eCLIP10.88□□□□□ -0.67
GABRA6-209ENST00000524220 ZNF579Q8NAF0 562 aaKnown RBP10.88□□□□□ -0.67
GABRA6-209ENST00000524220 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
GABRA6-209ENST00000524220 FGD5Q6ZNL6 1462 aa10.87□□□□□ -0.67
GABRA6-209ENST00000524220 IFT140Q96RY7 1462 aa10.86□□□□□ -0.67
GABRA6-209ENST00000524220 EIF4G3O43432 1585 aaKnown RBP10.85□□□□□ -0.67
GABRA6-209ENST00000524220 CREBZFQ9NS37 354 aa10.84□□□□□ -0.67
GABRA6-209ENST00000524220 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
GABRA6-209ENST00000524220 RAD54L2Q9Y4B4 1467 aa10.81□□□□□ -0.68
GABRA6-209ENST00000524220 PBRM1Q86U86 1689 aa10.8□□□□□ -0.68
GABRA6-209ENST00000524220 GALR2O43603 387 aaPredicted RBP10.8□□□□□ -0.68
GABRA6-209ENST00000524220 ZNF608Q9ULD9 1512 aaPredicted RBP10.79□□□□□ -0.68
GABRA6-209ENST00000524220 STAG3Q9UJ98 1225 aa10.79□□□□□ -0.68
GABRA6-209ENST00000524220 ABCA5Q8WWZ7 1642 aa10.79□□□□□ -0.68
GABRA6-209ENST00000524220 SOGA1O94964 1423 aa10.78□□□□□ -0.68
GABRA6-209ENST00000524220 ABCA10Q8WWZ4 1543 aa10.78□□□□□ -0.68
GABRA6-209ENST00000524220 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
GABRA6-209ENST00000524220 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
GABRA6-209ENST00000524220 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
GABRA6-209ENST00000524220 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.69
GABRA6-209ENST00000524220 CHD1O14646 1710 aa10.72□□□□□ -0.69
GABRA6-209ENST00000524220 GAPVD1Q14C86 1478 aa10.7□□□□□ -0.7
GABRA6-209ENST00000524220 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
GABRA6-209ENST00000524220 PHF12Q96QT6 1004 aa10.7□□□□□ -0.7
GABRA6-209ENST00000524220 POTEB2H3BUK9 544 aa10.69□□□□□ -0.7
GABRA6-209ENST00000524220 GRIN2BQ13224 1484 aa10.68□□□□□ -0.7
GABRA6-209ENST00000524220 ADAMTS12P58397 1594 aa10.68□□□□□ -0.7
GABRA6-209ENST00000524220 SNAPC4Q5SXM2 1469 aa10.68□□□□□ -0.7
GABRA6-209ENST00000524220 MAGI1Q96QZ7 1491 aaPredicted RBP10.68□□□□□ -0.7
GABRA6-209ENST00000524220 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
GABRA6-209ENST00000524220 ERICH3Q5RHP9 1530 aa10.66□□□□□ -0.7
GABRA6-209ENST00000524220 CUL7Q14999 1698 aa10.65□□□□□ -0.7
GABRA6-209ENST00000524220 KIF27Q86VH2 1401 aa10.64□□□□□ -0.71
GABRA6-209ENST00000524220 NPM1P06748 294 aaKnown RBP eCLIP10.63□□□□□ -0.71
GABRA6-209ENST00000524220 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
GABRA6-209ENST00000524220 TRIM41Q8WV44 630 aa10.62□□□□□ -0.71
GABRA6-209ENST00000524220 SYNJ2O15056 1496 aa10.61□□□□□ -0.71
GABRA6-209ENST00000524220 MNX1P50219 401 aaPredicted RBP10.6□□□□□ -0.71
GABRA6-209ENST00000524220 POTEMA6NI47 508 aa10.59□□□□□ -0.71
GABRA6-209ENST00000524220 GRIN2AQ12879 1464 aa10.57□□□□□ -0.72
GABRA6-209ENST00000524220 RUSC2Q8N2Y8 1516 aa10.57□□□□□ -0.72
GABRA6-209ENST00000524220 FHAD1B1AJZ9 1412 aa10.57□□□□□ -0.72
GABRA6-209ENST00000524220 POTEGQ6S5H5 508 aa10.55□□□□□ -0.72
GABRA6-209ENST00000524220 CEP170Q5SW79 1584 aa10.55□□□□□ -0.72
GABRA6-209ENST00000524220 CLASP1Q7Z460 1538 aa10.54□□□□□ -0.72
GABRA6-209ENST00000524220 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
GABRA6-209ENST00000524220 METRNQ9UJH8 293 aa10.54□□□□□ -0.72
GABRA6-209ENST00000524220 ASTLQ6HA08 431 aaPredicted RBP10.53□□□□□ -0.72
GABRA6-209ENST00000524220 IGF1RP08069 1367 aa10.52□□□□□ -0.72
GABRA6-209ENST00000524220 EEA1Q15075 1411 aa10.52□□□□□ -0.73
GABRA6-209ENST00000524220 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
GABRA6-209ENST00000524220 ATMINO43313 823 aaPredicted RBP10.51□□□□□ -0.73
GABRA6-209ENST00000524220 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
GABRA6-209ENST00000524220 NUP160Q12769 1436 aa10.5□□□□□ -0.73
GABRA6-209ENST00000524220 SLC39A7Q92504 469 aa10.5□□□□□ -0.73
GABRA6-209ENST00000524220 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
GABRA6-209ENST00000524220 C7P10643 843 aa10.48□□□□□ -0.73
GABRA6-209ENST00000524220 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
GABRA6-209ENST00000524220 RAPGEF2Q9Y4G8 1499 aa10.48□□□□□ -0.73
GABRA6-209ENST00000524220 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
GABRA6-209ENST00000524220 PRXQ9BXM0 1461 aa10.47□□□□□ -0.73
GABRA6-209ENST00000524220 KIF21BO75037 1637 aa10.47□□□□□ -0.73
GABRA6-209ENST00000524220 RIMBP3CA6NJZ7 1639 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms