RNA–Protein interactions for RNA: ENST00000524220.1

GABRA6-209, Transcript of gamma-aminobutyric acid type A receptor alpha6 subunit, humanhuman

TSL 4

Gene GABRA6, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA6-209ENST00000524220 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
GABRA6-209ENST00000524220 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
GABRA6-209ENST00000524220 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
GABRA6-209ENST00000524220 PHF23Q9BUL5 403 aaPredicted RBP18.3■□□□□ 0.52
GABRA6-209ENST00000524220 FOXD1Q16676 465 aa17.37■□□□□ 0.37
GABRA6-209ENST00000524220 POTEDQ86YR6 584 aa16.61■□□□□ 0.25
GABRA6-209ENST00000524220 MSH5O43196 834 aa16.39■□□□□ 0.21
GABRA6-209ENST00000524220 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
GABRA6-209ENST00000524220 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
GABRA6-209ENST00000524220 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
GABRA6-209ENST00000524220 ADRA2BP18089 450 aa15.9■□□□□ 0.14
GABRA6-209ENST00000524220 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
GABRA6-209ENST00000524220 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
GABRA6-209ENST00000524220 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
GABRA6-209ENST00000524220 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
GABRA6-209ENST00000524220 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
GABRA6-209ENST00000524220 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
GABRA6-209ENST00000524220 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
GABRA6-209ENST00000524220 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
GABRA6-209ENST00000524220 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
GABRA6-209ENST00000524220 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
GABRA6-209ENST00000524220 RNF216Q9NWF9 866 aaPredicted RBP13.79□□□□□ -0.2
GABRA6-209ENST00000524220 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
GABRA6-209ENST00000524220 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
GABRA6-209ENST00000524220 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
GABRA6-209ENST00000524220 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
GABRA6-209ENST00000524220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.35□□□□□ -0.27
GABRA6-209ENST00000524220 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
GABRA6-209ENST00000524220 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
GABRA6-209ENST00000524220 ABCC9O60706 1549 aa12.98□□□□□ -0.33
GABRA6-209ENST00000524220 CAPN15O75808 1086 aa12.96□□□□□ -0.33
GABRA6-209ENST00000524220 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
GABRA6-209ENST00000524220 POTEHQ6S545 545 aa12.95□□□□□ -0.34
GABRA6-209ENST00000524220 DSG3P32926 999 aa12.94□□□□□ -0.34
GABRA6-209ENST00000524220 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
GABRA6-209ENST00000524220 SLC4A2P04920 1241 aa12.67□□□□□ -0.38
GABRA6-209ENST00000524220 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
GABRA6-209ENST00000524220 ABCB7O75027 752 aa12.63□□□□□ -0.39
GABRA6-209ENST00000524220 KCNA4P22459 653 aa12.62□□□□□ -0.39
GABRA6-209ENST00000524220 APLP2Q06481 763 aa12.62□□□□□ -0.39
GABRA6-209ENST00000524220 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
GABRA6-209ENST00000524220 NACADO15069 1562 aa12.59□□□□□ -0.39
GABRA6-209ENST00000524220 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
GABRA6-209ENST00000524220 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
GABRA6-209ENST00000524220 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
GABRA6-209ENST00000524220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.52□□□□□ -0.41
GABRA6-209ENST00000524220 HNRNPUL2Q1KMD3 747 aaKnown RBP12.52□□□□□ -0.41
GABRA6-209ENST00000524220 DCAF8L2P0C7V8 631 aa12.44□□□□□ -0.42
GABRA6-209ENST00000524220 SAMD1Q6SPF0 538 aaPredicted RBP12.43□□□□□ -0.42
GABRA6-209ENST00000524220 UNC13AQ9UPW8 1703 aa12.41□□□□□ -0.42
GABRA6-209ENST00000524220 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
GABRA6-209ENST00000524220 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
GABRA6-209ENST00000524220 POLA2Q14181 598 aa12.23□□□□□ -0.45
GABRA6-209ENST00000524220 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
GABRA6-209ENST00000524220 BICRAQ9NZM4 1560 aa12.21□□□□□ -0.46
GABRA6-209ENST00000524220 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
GABRA6-209ENST00000524220 SHROOM4Q9ULL8 1493 aa12.09□□□□□ -0.47
GABRA6-209ENST00000524220 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
GABRA6-209ENST00000524220 AKT1S1Q96B36 256 aa12□□□□□ -0.49
GABRA6-209ENST00000524220 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
GABRA6-209ENST00000524220 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
GABRA6-209ENST00000524220 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
GABRA6-209ENST00000524220 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
GABRA6-209ENST00000524220 EIF4G1Q04637 1599 aaKnown RBP11.88□□□□□ -0.51
GABRA6-209ENST00000524220 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
GABRA6-209ENST00000524220 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
GABRA6-209ENST00000524220 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
GABRA6-209ENST00000524220 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
GABRA6-209ENST00000524220 CC2D2AQ9P2K1 1620 aa11.79□□□□□ -0.52
GABRA6-209ENST00000524220 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
GABRA6-209ENST00000524220 HAX1O00165 279 aa11.77□□□□□ -0.53
GABRA6-209ENST00000524220 SMARCA4P51532 1647 aa11.76□□□□□ -0.53
GABRA6-209ENST00000524220 FXR2P51116 673 aaKnown RBP eCLIP11.74□□□□□ -0.53
GABRA6-209ENST00000524220 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
GABRA6-209ENST00000524220 BAZ1AQ9NRL2 1556 aaPredicted RBP11.74□□□□□ -0.53
GABRA6-209ENST00000524220 MROH2BQ7Z745 1585 aa11.66□□□□□ -0.54
GABRA6-209ENST00000524220 PEG3Q9GZU2 1588 aa11.64□□□□□ -0.55
GABRA6-209ENST00000524220 SMARCA2P51531 1590 aa11.63□□□□□ -0.55
GABRA6-209ENST00000524220 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
GABRA6-209ENST00000524220 ATAD2BQ9ULI0 1458 aa11.59□□□□□ -0.55
GABRA6-209ENST00000524220 EVX2Q03828 476 aa11.59□□□□□ -0.55
GABRA6-209ENST00000524220 ZBTB22O15209 634 aa11.58□□□□□ -0.56
GABRA6-209ENST00000524220 WIZO95785 1651 aa11.58□□□□□ -0.56
GABRA6-209ENST00000524220 NCAPD3P42695 1498 aa11.56□□□□□ -0.56
GABRA6-209ENST00000524220 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
GABRA6-209ENST00000524220 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
GABRA6-209ENST00000524220 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
GABRA6-209ENST00000524220 BAZ1BQ9UIG0 1483 aaKnown RBP11.53□□□□□ -0.56
GABRA6-209ENST00000524220 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
GABRA6-209ENST00000524220 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.56
GABRA6-209ENST00000524220 FBLN2P98095 1184 aa11.51□□□□□ -0.57
GABRA6-209ENST00000524220 PRKAR2AP13861 404 aaKnown RBP11.48□□□□□ -0.57
GABRA6-209ENST00000524220 CLEC11AQ9Y240 323 aa11.47□□□□□ -0.57
GABRA6-209ENST00000524220 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
GABRA6-209ENST00000524220 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
GABRA6-209ENST00000524220 MKRN4PQ13434 485 aaPredicted RBP11.38□□□□□ -0.59
GABRA6-209ENST00000524220 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
GABRA6-209ENST00000524220 ZNF692Q9BU19 519 aaPredicted RBP11.37□□□□□ -0.59
GABRA6-209ENST00000524220 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
GABRA6-209ENST00000524220 LAMC3Q9Y6N6 1575 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms