RNA–Protein interactions for RNA: ENST00000524202.5

PTK2-255, Transcript of protein tyrosine kinase 2, human

TSL 1 (best)

Gene PTK2, Length 3,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-255	ENST00000524202	CHIC2	Q9UKJ5	165 aa		11.69	□□□□□ -0.54
PTK2-255	ENST00000524202	BCAN	Q96GW7	911 aa		11.68	□□□□□ -0.54
PTK2-255	ENST00000524202	CNGB1	Q14028	1251 aa	Predicted RBP	11.68	□□□□□ -0.54
PTK2-255	ENST00000524202	PHLDB1	Q86UU1	1377 aa		11.67	□□□□□ -0.54
PTK2-255	ENST00000524202	BIVM-ERCC5	R4GMW8	1640 aa		11.66	□□□□□ -0.54
PTK2-255	ENST00000524202	HMGXB3	Q12766	1538 aa		11.65	□□□□□ -0.54
PTK2-255	ENST00000524202	FANCD2	Q9BXW9	1451 aa		11.64	□□□□□ -0.55
PTK2-255	ENST00000524202	ERICH3	Q5RHP9	1530 aa		11.63	□□□□□ -0.55
PTK2-255	ENST00000524202	CC2D2A	Q9P2K1	1620 aa		11.62	□□□□□ -0.55
PTK2-255	ENST00000524202	RRP7BP	Q9NSQ0	103 aa		11.62	□□□□□ -0.55
PTK2-255	ENST00000524202	TRIM52	Q96A61	297 aa		11.6	□□□□□ -0.55
PTK2-255	ENST00000524202	RRBP1	Q9P2E9	1410 aa	Known RBP	11.59	□□□□□ -0.55
PTK2-255	ENST00000524202	FOXD1	Q16676	465 aa		11.58	□□□□□ -0.56
PTK2-255	ENST00000524202	PELP1	Q8IZL8	1130 aa	Known RBP	11.57	□□□□□ -0.56
PTK2-255	ENST00000524202	FBLN2	P98095	1184 aa		11.56	□□□□□ -0.56
PTK2-255	ENST00000524202	MTUS2	Q5JR59	1369 aa		11.56	□□□□□ -0.56
PTK2-255	ENST00000524202	SETD5	Q9C0A6	1442 aa		11.55	□□□□□ -0.56
PTK2-255	ENST00000524202	SENP3-EIF4A1	A0A087X0R7	540 aa		11.55	□□□□□ -0.56
PTK2-255	ENST00000524202	LRRC9	Q6ZRR7	1453 aa		11.55	□□□□□ -0.56
PTK2-255	ENST00000524202	POLA1	P09884	1462 aa	Predicted RBP	11.54	□□□□□ -0.56
PTK2-255	ENST00000524202	CLSPN	Q9HAW4	1339 aa		11.51	□□□□□ -0.57
PTK2-255	ENST00000524202	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.5	□□□□□ -0.57
PTK2-255	ENST00000524202	TOPBP1	Q92547	1522 aa		11.5	□□□□□ -0.57
PTK2-255	ENST00000524202	TIAM1	Q13009	1591 aa		11.5	□□□□□ -0.57
PTK2-255	ENST00000524202	PCF11	O94913	1555 aa	Known RBP	11.49	□□□□□ -0.57
PTK2-255	ENST00000524202	POLR3GL	Q9BT43	218 aa		11.49	□□□□□ -0.57
PTK2-255	ENST00000524202	FHAD1	B1AJZ9	1412 aa		11.48	□□□□□ -0.57
PTK2-255	ENST00000524202	WDR97	A6NE52	1622 aa		11.48	□□□□□ -0.57
PTK2-255	ENST00000524202	MAPKBP1	O60336	1514 aa		11.47	□□□□□ -0.57
PTK2-255	ENST00000524202	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.47	□□□□□ -0.57
PTK2-255	ENST00000524202	TONSL	Q96HA7	1378 aa		11.47	□□□□□ -0.57
PTK2-255	ENST00000524202	AQR	O60306	1485 aa	Known RBP eCLIP	11.46	□□□□□ -0.57	2e-6	■■■□□ 17.6
PTK2-255	ENST00000524202	IRX6	P78412	446 aa	Predicted RBP	11.46	□□□□□ -0.57
PTK2-255	ENST00000524202	FKBP8	Q14318	412 aa		11.46	□□□□□ -0.57
PTK2-255	ENST00000524202	ZNF326	Q5BKZ1	582 aa	Known RBP	11.46	□□□□□ -0.57
PTK2-255	ENST00000524202	PPP1R15A	O75807	674 aa	Predicted RBP	11.45	□□□□□ -0.58
PTK2-255	ENST00000524202	URB2	Q14146	1524 aa	Known RBP	11.45	□□□□□ -0.58
PTK2-255	ENST00000524202	PTPRK	Q15262	1439 aa		11.45	□□□□□ -0.58
PTK2-255	ENST00000524202	ZNF644	Q9H582	1327 aa	Predicted RBP	11.44	□□□□□ -0.58
PTK2-255	ENST00000524202	ANP32C	O43423	234 aa		11.42	□□□□□ -0.58
PTK2-255	ENST00000524202	GAPVD1	Q14C86	1478 aa		11.41	□□□□□ -0.58
PTK2-255	ENST00000524202	PDS5B	Q9NTI5	1447 aa		11.4	□□□□□ -0.58
PTK2-255	ENST00000524202	FGD6	Q6ZV73	1430 aa		11.4	□□□□□ -0.59
PTK2-255	ENST00000524202	ABCA10	Q8WWZ4	1543 aa		11.4	□□□□□ -0.59
PTK2-255	ENST00000524202	DNMBP	Q6XZF7	1577 aa		11.39	□□□□□ -0.59
PTK2-255	ENST00000524202	CASKIN1	Q8WXD9	1431 aa		11.38	□□□□□ -0.59
PTK2-255	ENST00000524202	FMN1	Q68DA7	1419 aa		11.37	□□□□□ -0.59
PTK2-255	ENST00000524202	CCDC18	Q5T9S5	1454 aa		11.36	□□□□□ -0.59
PTK2-255	ENST00000524202	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
PTK2-255	ENST00000524202	NCOA2	Q15596	1464 aa		11.35	□□□□□ -0.59
PTK2-255	ENST00000524202	FAM9B	Q8IZU0	186 aa		11.34	□□□□□ -0.59
PTK2-255	ENST00000524202	HSPA5	P11021	654 aa	Known RBP	11.34	□□□□□ -0.59
PTK2-255	ENST00000524202	CCDC184	Q52MB2	194 aa		11.33	□□□□□ -0.6
PTK2-255	ENST00000524202	FYCO1	Q9BQS8	1478 aa		11.33	□□□□□ -0.6
PTK2-255	ENST00000524202	L3MBTL2	Q969R5	705 aa		11.33	□□□□□ -0.6
PTK2-255	ENST00000524202	CDK13	Q14004	1512 aa	Known RBP	11.33	□□□□□ -0.6
PTK2-255	ENST00000524202	MPHOSPH9	Q99550	1183 aa		11.32	□□□□□ -0.6
PTK2-255	ENST00000524202	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.32	□□□□□ -0.6
PTK2-255	ENST00000524202	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.32	□□□□□ -0.6
PTK2-255	ENST00000524202	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.3	□□□□□ -0.6
PTK2-255	ENST00000524202	C11orf95	C9JLR9	678 aa	Predicted RBP	11.3	□□□□□ -0.6
PTK2-255	ENST00000524202	NEFL	P07196	543 aa		11.3	□□□□□ -0.6
PTK2-255	ENST00000524202	NAIP	Q13075	1403 aa		11.3	□□□□□ -0.6
PTK2-255	ENST00000524202	SNAPC4	Q5SXM2	1469 aa		11.3	□□□□□ -0.6
PTK2-255	ENST00000524202	MYOM3	Q5VTT5	1437 aa		11.3	□□□□□ -0.6
PTK2-255	ENST00000524202	PRDM2	Q13029	1718 aa		11.3	□□□□□ -0.6
PTK2-255	ENST00000524202	TSHZ2	Q9NRE2	1034 aa		11.29	□□□□□ -0.6
PTK2-255	ENST00000524202	KDM2A	Q9Y2K7	1162 aa		11.29	□□□□□ -0.6
PTK2-255	ENST00000524202	MAGI3	Q5TCQ9	1506 aa		11.28	□□□□□ -0.6
PTK2-255	ENST00000524202	WASHC2A	Q641Q2	1341 aa		11.28	□□□□□ -0.6
PTK2-255	ENST00000524202	MAP3K1	Q13233	1512 aa		11.26	□□□□□ -0.61
PTK2-255	ENST00000524202	KIF21A	Q7Z4S6	1674 aa		11.26	□□□□□ -0.61
PTK2-255	ENST00000524202	NBPF8	Q3BBV2	869 aa		11.26	□□□□□ -0.61
PTK2-255	ENST00000524202	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.26	□□□□□ -0.61
PTK2-255	ENST00000524202	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
PTK2-255	ENST00000524202	HFM1	A2PYH4	1435 aa		11.25	□□□□□ -0.61
PTK2-255	ENST00000524202	UACA	Q9BZF9	1416 aa		11.25	□□□□□ -0.61
PTK2-255	ENST00000524202	CFAP43	Q8NDM7	1665 aa		11.25	□□□□□ -0.61
PTK2-255	ENST00000524202	EFCAB5	A4FU69	1503 aa		11.24	□□□□□ -0.61
PTK2-255	ENST00000524202	SALL2	Q9Y467	1007 aa	Predicted RBP	11.23	□□□□□ -0.61
PTK2-255	ENST00000524202	GRIN2B	Q13224	1484 aa		11.23	□□□□□ -0.61
PTK2-255	ENST00000524202	MRS2	Q9HD23	443 aa		11.22	□□□□□ -0.61
PTK2-255	ENST00000524202	CTTNBP2	Q8WZ74	1663 aa		11.22	□□□□□ -0.61
PTK2-255	ENST00000524202	KDM6B	O15054	1643 aa		11.22	□□□□□ -0.61
PTK2-255	ENST00000524202	CUL7	Q14999	1698 aa		11.21	□□□□□ -0.61
PTK2-255	ENST00000524202	LRRIQ1	Q96JM4	1722 aa		11.21	□□□□□ -0.61
PTK2-255	ENST00000524202	LAMC3	Q9Y6N6	1575 aa		11.21	□□□□□ -0.61
PTK2-255	ENST00000524202	PRG4	Q92954	1404 aa	Predicted RBP	11.21	□□□□□ -0.62
PTK2-255	ENST00000524202	PTPN23	Q9H3S7	1636 aa		11.21	□□□□□ -0.62
PTK2-255	ENST00000524202	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.21	□□□□□ -0.62	3e-7	■■■■□ 25.2
PTK2-255	ENST00000524202	THOC2	Q8NI27	1593 aa	Known RBP	11.21	□□□□□ -0.62
PTK2-255	ENST00000524202	TIMELESS	Q9UNS1	1208 aa		11.2	□□□□□ -0.62
PTK2-255	ENST00000524202	EPRS	P07814	1512 aa	Known RBP	11.2	□□□□□ -0.62
PTK2-255	ENST00000524202	RGL3	Q3MIN7	710 aa		11.19	□□□□□ -0.62
PTK2-255	ENST00000524202	ERCC6	Q03468	1493 aa		11.19	□□□□□ -0.62
PTK2-255	ENST00000524202	PKD2	Q13563	968 aa		11.19	□□□□□ -0.62
PTK2-255	ENST00000524202	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	9e-7	■■■■■ 28.8
PTK2-255	ENST00000524202	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.19	□□□□□ -0.62
PTK2-255	ENST00000524202	ABCA5	Q8WWZ7	1642 aa		11.17	□□□□□ -0.62
PTK2-255	ENST00000524202	JPH4	Q96JJ6	628 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms