RNA–Protein interactions for RNA: ENST00000524202.5

PTK2-255, Transcript of protein tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene PTK2, Length 3,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-255ENST00000524202 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
PTK2-255ENST00000524202 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
PTK2-255ENST00000524202 DCAF8L2P0C7V8 631 aa14.4□□□□□ -0.1
PTK2-255ENST00000524202 SUPT5HO00267 1087 aaKnown RBP14.33□□□□□ -0.11
PTK2-255ENST00000524202 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
PTK2-255ENST00000524202 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
PTK2-255ENST00000524202 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
PTK2-255ENST00000524202 MYO15BQ96JP2 1530 aa13.52□□□□□ -0.25
PTK2-255ENST00000524202 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
PTK2-255ENST00000524202 CCDC180Q9P1Z9 1646 aa13.47□□□□□ -0.25
PTK2-255ENST00000524202 PCGF6Q9BYE7 350 aa13.46□□□□□ -0.25
PTK2-255ENST00000524202 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
PTK2-255ENST00000524202 PPARGC1BQ86YN6 1023 aaKnown RBP13.27□□□□□ -0.29
PTK2-255ENST00000524202 ABCC9O60706 1549 aa13.22□□□□□ -0.29
PTK2-255ENST00000524202 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
PTK2-255ENST00000524202 HRCP23327 699 aa13.14□□□□□ -0.31
PTK2-255ENST00000524202 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
PTK2-255ENST00000524202 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
PTK2-255ENST00000524202 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
PTK2-255ENST00000524202 DCAF1Q9Y4B6 1507 aa12.99□□□□□ -0.33
PTK2-255ENST00000524202 CECR2Q9BXF3 1484 aa12.95□□□□□ -0.34
PTK2-255ENST00000524202 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
PTK2-255ENST00000524202 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTK2-255ENST00000524202 TRIM26Q12899 539 aaPredicted RBP12.88□□□□□ -0.35
PTK2-255ENST00000524202 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
PTK2-255ENST00000524202 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
PTK2-255ENST00000524202 WIZO95785 1651 aa12.71□□□□□ -0.37
PTK2-255ENST00000524202 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
PTK2-255ENST00000524202 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
PTK2-255ENST00000524202 NACADO15069 1562 aa12.61□□□□□ -0.39
PTK2-255ENST00000524202 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
PTK2-255ENST00000524202 CCER1Q8TC90 406 aaPredicted RBP12.57□□□□□ -0.4
PTK2-255ENST00000524202 CCDC88BA6NC98 1476 aa12.52□□□□□ -0.41
PTK2-255ENST00000524202 SOGA1O94964 1423 aa12.5□□□□□ -0.41
PTK2-255ENST00000524202 RUSC2Q8N2Y8 1516 aa12.46□□□□□ -0.41
PTK2-255ENST00000524202 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
PTK2-255ENST00000524202 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
PTK2-255ENST00000524202 ZEB1P37275 1124 aaPredicted RBP12.42□□□□□ -0.42
PTK2-255ENST00000524202 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
PTK2-255ENST00000524202 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
PTK2-255ENST00000524202 CEP162Q5TB80 1403 aa12.34□□□□□ -0.43
PTK2-255ENST00000524202 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
PTK2-255ENST00000524202 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
PTK2-255ENST00000524202 UNC13AQ9UPW8 1703 aa12.28□□□□□ -0.44
PTK2-255ENST00000524202 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
PTK2-255ENST00000524202 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
PTK2-255ENST00000524202 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
PTK2-255ENST00000524202 APLP2Q06481 763 aa12.25□□□□□ -0.45
PTK2-255ENST00000524202 ITGAEP38570 1179 aa12.24□□□□□ -0.45
PTK2-255ENST00000524202 DIEXFQ68CQ4 756 aaKnown RBP12.23□□□□□ -0.45
PTK2-255ENST00000524202 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
PTK2-255ENST00000524202 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
PTK2-255ENST00000524202 TNIKQ9UKE5 1360 aa12.18□□□□□ -0.46
PTK2-255ENST00000524202 BAZ1BQ9UIG0 1483 aaKnown RBP12.17□□□□□ -0.46
PTK2-255ENST00000524202 NEUROD1Q13562 356 aa12.16□□□□□ -0.46
PTK2-255ENST00000524202 ATP1B4Q9UN42 357 aaPredicted RBP12.16□□□□□ -0.46
PTK2-255ENST00000524202 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
PTK2-255ENST00000524202 CLIP1P30622 1438 aa12.13□□□□□ -0.47
PTK2-255ENST00000524202 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
PTK2-255ENST00000524202 GOLGA3Q08378 1498 aa12.12□□□□□ -0.47
PTK2-255ENST00000524202 RAPGEF2Q9Y4G8 1499 aa12.12□□□□□ -0.47
PTK2-255ENST00000524202 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
PTK2-255ENST00000524202 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
PTK2-255ENST00000524202 GTF3C3Q9Y5Q9 886 aa12.06□□□□□ -0.48
PTK2-255ENST00000524202 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
PTK2-255ENST00000524202 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
PTK2-255ENST00000524202 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
PTK2-255ENST00000524202 MIER1Q8N108 512 aa12.02□□□□□ -0.49
PTK2-255ENST00000524202 EEA1Q15075 1411 aa12.02□□□□□ -0.49
PTK2-255ENST00000524202 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
PTK2-255ENST00000524202 CENPBP07199 599 aaPredicted RBP11.95□□□□□ -0.5
PTK2-255ENST00000524202 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
PTK2-255ENST00000524202 KIF21BO75037 1637 aa11.9□□□□□ -0.5
PTK2-255ENST00000524202 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
PTK2-255ENST00000524202 ARID3CA6NKF2 412 aa11.89□□□□□ -0.51
PTK2-255ENST00000524202 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
PTK2-255ENST00000524202 PEG3Q9GZU2 1588 aa11.87□□□□□ -0.51
PTK2-255ENST00000524202 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
PTK2-255ENST00000524202 CUX1P39880 1505 aa11.86□□□□□ -0.51
PTK2-255ENST00000524202 CUX2O14529 1486 aa11.84□□□□□ -0.51
PTK2-255ENST00000524202 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
PTK2-255ENST00000524202 TOP2BQ02880 1626 aa11.82□□□□□ -0.52
PTK2-255ENST00000524202 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
PTK2-255ENST00000524202 KCNH8Q96L42 1107 aa11.79□□□□□ -0.52
PTK2-255ENST00000524202 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
PTK2-255ENST00000524202 PRXQ9BXM0 1461 aa11.78□□□□□ -0.52
PTK2-255ENST00000524202 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
PTK2-255ENST00000524202 IGF1RP08069 1367 aa11.77□□□□□ -0.52
PTK2-255ENST00000524202 CARMIL1Q5VZK9 1371 aa11.76□□□□□ -0.53
PTK2-255ENST00000524202 NESP48681 1621 aa11.75□□□□□ -0.53
PTK2-255ENST00000524202 RAD54L2Q9Y4B4 1467 aa11.75□□□□□ -0.53
PTK2-255ENST00000524202 ARHGAP35Q9NRY4 1499 aa11.74□□□□□ -0.53
PTK2-255ENST00000524202 CFTRP13569 1480 aa11.74□□□□□ -0.53
PTK2-255ENST00000524202 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
PTK2-255ENST00000524202 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
PTK2-255ENST00000524202 FGD5Q6ZNL6 1462 aa11.71□□□□□ -0.53
PTK2-255ENST00000524202 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.53
PTK2-255ENST00000524202 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.54
PTK2-255ENST00000524202 FHOD3Q2V2M9 1422 aa11.7□□□□□ -0.54
PTK2-255ENST00000524202 RAB3GAP2Q9H2M9 1393 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms