RNA–Protein interactions for RNA: ENST00000521604.6

TCEA1-208, Transcript of transcription elongation factor A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-208ENST00000521604 TRIM52Q96A61 297 aa25.29■■□□□ 1.64
TCEA1-208ENST00000521604 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
TCEA1-208ENST00000521604 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
TCEA1-208ENST00000521604 PHLDB1Q86UU1 1377 aa25.24■■□□□ 1.63
TCEA1-208ENST00000521604 PPP1R15AO75807 674 aaPredicted RBP25.2■■□□□ 1.62
TCEA1-208ENST00000521604 IGF1RP08069 1367 aa25.18■■□□□ 1.62
TCEA1-208ENST00000521604 NEFLP07196 543 aa25.14■■□□□ 1.61
TCEA1-208ENST00000521604 TIAM1Q13009 1591 aa25.13■■□□□ 1.61
TCEA1-208ENST00000521604 LRRC9Q6ZRR7 1453 aa25.12■■□□□ 1.61
TCEA1-208ENST00000521604 ANP32CO43423 234 aa25.1■■□□□ 1.61
TCEA1-208ENST00000521604 CARMIL1Q5VZK9 1371 aa25.09■■□□□ 1.61
TCEA1-208ENST00000521604 RBM19Q9Y4C8 960 aaKnown RBP25.08■■□□□ 1.61
TCEA1-208ENST00000521604 CFTRP13569 1480 aa25.08■■□□□ 1.61
TCEA1-208ENST00000521604 NCAPD3P42695 1498 aa25.08■■□□□ 1.61
TCEA1-208ENST00000521604 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
TCEA1-208ENST00000521604 CCER2I3L3R5 266 aa24.98■■□□□ 1.59
TCEA1-208ENST00000521604 IRX6P78412 446 aaPredicted RBP24.96■■□□□ 1.59
TCEA1-208ENST00000521604 MAP3K1Q13233 1512 aa24.95■■□□□ 1.59
TCEA1-208ENST00000521604 FHOD3Q2V2M9 1422 aa24.94■■□□□ 1.58
TCEA1-208ENST00000521604 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
TCEA1-208ENST00000521604 TONSLQ96HA7 1378 aa24.92■■□□□ 1.58
TCEA1-208ENST00000521604 FHAD1B1AJZ9 1412 aa24.91■■□□□ 1.58
TCEA1-208ENST00000521604 FGD5Q6ZNL6 1462 aa24.9■■□□□ 1.58
TCEA1-208ENST00000521604 PCF11O94913 1555 aaKnown RBP24.9■■□□□ 1.58
TCEA1-208ENST00000521604 BCL11AQ9H165 835 aa24.88■■□□□ 1.57
TCEA1-208ENST00000521604 HNRNPUQ00839 825 aaKnown RBP eCLIP24.87■■□□□ 1.57
TCEA1-208ENST00000521604 MSH5O43196 834 aa24.81■■□□□ 1.56
TCEA1-208ENST00000521604 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
TCEA1-208ENST00000521604 PTPRKQ15262 1439 aa24.77■■□□□ 1.56
TCEA1-208ENST00000521604 CFAP43Q8NDM7 1665 aa24.75■■□□□ 1.55
TCEA1-208ENST00000521604 CCDC18Q5T9S5 1454 aa24.75■■□□□ 1.55
TCEA1-208ENST00000521604 FGD6Q6ZV73 1430 aa24.74■■□□□ 1.55
TCEA1-208ENST00000521604 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
TCEA1-208ENST00000521604 MTUS2Q5JR59 1369 aa24.71■■□□□ 1.55
TCEA1-208ENST00000521604 CHIC2Q9UKJ5 165 aa24.7■■□□□ 1.54
TCEA1-208ENST00000521604 CASKIN1Q8WXD9 1431 aa24.7■■□□□ 1.54
TCEA1-208ENST00000521604 RRP7BPQ9NSQ0 103 aa24.68■■□□□ 1.54
TCEA1-208ENST00000521604 FYCO1Q9BQS8 1478 aa24.68■■□□□ 1.54
TCEA1-208ENST00000521604 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
TCEA1-208ENST00000521604 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.544e-8■■■■□ 23.2
TCEA1-208ENST00000521604 HSPA5P11021 654 aaKnown RBP24.67■■□□□ 1.54
TCEA1-208ENST00000521604 CDK11AQ9UQ88 783 aaPredicted RBP24.67■■□□□ 1.54
TCEA1-208ENST00000521604 WASHC2AQ641Q2 1341 aa24.66■■□□□ 1.54
TCEA1-208ENST00000521604 UACAQ9BZF9 1416 aa24.66■■□□□ 1.54
TCEA1-208ENST00000521604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.65■■□□□ 1.54
TCEA1-208ENST00000521604 HFM1A2PYH4 1435 aa24.63■■□□□ 1.53
TCEA1-208ENST00000521604 NAIPQ13075 1403 aa24.61■■□□□ 1.53
TCEA1-208ENST00000521604 FAM9BQ8IZU0 186 aa24.59■■□□□ 1.53
TCEA1-208ENST00000521604 PTPN23Q9H3S7 1636 aa24.57■■□□□ 1.52
TCEA1-208ENST00000521604 FOXD1Q16676 465 aa24.57■■□□□ 1.52
TCEA1-208ENST00000521604 FANCD2Q9BXW9 1451 aa24.57■■□□□ 1.52
TCEA1-208ENST00000521604 ERICH6Q7L0X2 663 aa24.56■■□□□ 1.52
TCEA1-208ENST00000521604 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
TCEA1-208ENST00000521604 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
TCEA1-208ENST00000521604 C11orf95C9JLR9 678 aaPredicted RBP24.54■■□□□ 1.52
TCEA1-208ENST00000521604 CNGB1Q14028 1251 aaPredicted RBP24.53■■□□□ 1.52
TCEA1-208ENST00000521604 KDM5BQ9UGL1 1544 aa24.53■■□□□ 1.52
TCEA1-208ENST00000521604 NCOA2Q15596 1464 aa24.52■■□□□ 1.52
TCEA1-208ENST00000521604 EIF4G2P78344 907 aaKnown RBP eCLIP24.52■■□□□ 1.52
TCEA1-208ENST00000521604 EFCAB5A4FU69 1503 aa24.52■■□□□ 1.52
TCEA1-208ENST00000521604 B4GALNT3Q6L9W6 998 aa24.52■■□□□ 1.52
TCEA1-208ENST00000521604 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
TCEA1-208ENST00000521604 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
TCEA1-208ENST00000521604 FANCIQ9NVI1 1328 aa24.51■■□□□ 1.51
TCEA1-208ENST00000521604 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
TCEA1-208ENST00000521604 MYOM3Q5VTT5 1437 aa24.49■■□□□ 1.51
TCEA1-208ENST00000521604 L3MBTL2Q969R5 705 aa24.47■■□□□ 1.51
TCEA1-208ENST00000521604 MRS2Q9HD23 443 aa24.47■■□□□ 1.51
TCEA1-208ENST00000521604 PPP4R2Q9NY27 417 aa24.46■■□□□ 1.51
TCEA1-208ENST00000521604 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
TCEA1-208ENST00000521604 TDRD9Q8NDG6 1382 aaKnown RBP24.46■■□□□ 1.51
TCEA1-208ENST00000521604 SENP3-EIF4A1A0A087X0R7 540 aa24.43■■□□□ 1.5
TCEA1-208ENST00000521604 PRKRIP1Q9H875 184 aaPredicted RBP24.43■■□□□ 1.5
TCEA1-208ENST00000521604 TOPBP1Q92547 1522 aa24.42■■□□□ 1.5
TCEA1-208ENST00000521604 NESP48681 1621 aa24.41■■□□□ 1.5
TCEA1-208ENST00000521604 MPHOSPH9Q99550 1183 aa24.41■■□□□ 1.5
TCEA1-208ENST00000521604 DENND4BO75064 1496 aaPredicted RBP24.4■■□□□ 1.5
TCEA1-208ENST00000521604 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
TCEA1-208ENST00000521604 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
TCEA1-208ENST00000521604 LRRIQ1Q96JM4 1722 aa24.36■■□□□ 1.49
TCEA1-208ENST00000521604 CTTNBP2Q8WZ74 1663 aa24.36■■□□□ 1.49
TCEA1-208ENST00000521604 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
TCEA1-208ENST00000521604 CCDC7Q96M83 1385 aa24.34■■□□□ 1.49
TCEA1-208ENST00000521604 GRIN2BQ13224 1484 aa24.33■■□□□ 1.49
TCEA1-208ENST00000521604 KDM6BO15054 1643 aa24.33■■□□□ 1.49
TCEA1-208ENST00000521604 POLR3GLQ9BT43 218 aa24.32■■□□□ 1.48
TCEA1-208ENST00000521604 MAGI3Q5TCQ9 1506 aa24.32■■□□□ 1.48
TCEA1-208ENST00000521604 CC2D2AQ9P2K1 1620 aa24.31■■□□□ 1.48
TCEA1-208ENST00000521604 CUL7Q14999 1698 aa24.31■■□□□ 1.48
TCEA1-208ENST00000521604 ERICH6BQ5W0A0 696 aa24.3■■□□□ 1.48
TCEA1-208ENST00000521604 SUPT6HQ7KZ85 1726 aaKnown RBP24.29■■□□□ 1.48
TCEA1-208ENST00000521604 ZBED9Q6R2W3 1325 aa24.28■■□□□ 1.48
TCEA1-208ENST00000521604 KIF7Q2M1P5 1343 aa24.26■■□□□ 1.47
TCEA1-208ENST00000521604 NCOA1Q15788 1441 aa24.26■■□□□ 1.47
TCEA1-208ENST00000521604 UGGT2Q9NYU1 1516 aa24.26■■□□□ 1.47
TCEA1-208ENST00000521604 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
TCEA1-208ENST00000521604 SAMD9Q5K651 1589 aa24.23■■□□□ 1.47
TCEA1-208ENST00000521604 NBR1Q14596 966 aa24.22■■□□□ 1.47
TCEA1-208ENST00000521604 ZNF326Q5BKZ1 582 aaKnown RBP24.21■■□□□ 1.47
TCEA1-208ENST00000521604 GAPVD1Q14C86 1478 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms