RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
CTNNA1-221ENST00000520339 CHMP7Q8WUX9 453 aaPredicted RBP16.57■□□□□ 0.24
CTNNA1-221ENST00000520339 SNAPC4Q5SXM2 1469 aa16.56■□□□□ 0.24
CTNNA1-221ENST00000520339 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
CTNNA1-221ENST00000520339 WDR97A6NE52 1622 aa16.52■□□□□ 0.24
CTNNA1-221ENST00000520339 MAGI1Q96QZ7 1491 aaPredicted RBP16.52■□□□□ 0.23
CTNNA1-221ENST00000520339 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
CTNNA1-221ENST00000520339 ABCA10Q8WWZ4 1543 aa16.49■□□□□ 0.23
CTNNA1-221ENST00000520339 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
CTNNA1-221ENST00000520339 CHD1O14646 1710 aa16.47■□□□□ 0.23
CTNNA1-221ENST00000520339 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
CTNNA1-221ENST00000520339 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.23
CTNNA1-221ENST00000520339 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
CTNNA1-221ENST00000520339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
CTNNA1-221ENST00000520339 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
CTNNA1-221ENST00000520339 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
CTNNA1-221ENST00000520339 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
CTNNA1-221ENST00000520339 ATF5Q9Y2D1 282 aaPredicted RBP16.41■□□□□ 0.22
CTNNA1-221ENST00000520339 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
CTNNA1-221ENST00000520339 ABCA5Q8WWZ7 1642 aa16.37■□□□□ 0.21
CTNNA1-221ENST00000520339 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
CTNNA1-221ENST00000520339 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
CTNNA1-221ENST00000520339 GRIN2AQ12879 1464 aa16.31■□□□□ 0.2
CTNNA1-221ENST00000520339 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
CTNNA1-221ENST00000520339 NUP160Q12769 1436 aa16.3■□□□□ 0.2
CTNNA1-221ENST00000520339 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
CTNNA1-221ENST00000520339 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
CTNNA1-221ENST00000520339 FKBP8Q14318 412 aa16.26■□□□□ 0.19
CTNNA1-221ENST00000520339 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
CTNNA1-221ENST00000520339 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
CTNNA1-221ENST00000520339 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
CTNNA1-221ENST00000520339 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
CTNNA1-221ENST00000520339 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
CTNNA1-221ENST00000520339 IGF1RP08069 1367 aa16.18■□□□□ 0.18
CTNNA1-221ENST00000520339 KIF27Q86VH2 1401 aa16.13■□□□□ 0.17
CTNNA1-221ENST00000520339 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
CTNNA1-221ENST00000520339 APLP2Q06481 763 aa16.13■□□□□ 0.17
CTNNA1-221ENST00000520339 SHROOM2Q13796 1616 aa16.1■□□□□ 0.17
CTNNA1-221ENST00000520339 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-221ENST00000520339 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
CTNNA1-221ENST00000520339 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
CTNNA1-221ENST00000520339 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
CTNNA1-221ENST00000520339 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
CTNNA1-221ENST00000520339 CUL7Q14999 1698 aa15.93■□□□□ 0.14
CTNNA1-221ENST00000520339 FAM69CQ0P6D2 419 aa15.92■□□□□ 0.14
CTNNA1-221ENST00000520339 PTPRGP23470 1445 aa15.92■□□□□ 0.14
CTNNA1-221ENST00000520339 TNIKQ9UKE5 1360 aa15.88■□□□□ 0.13
CTNNA1-221ENST00000520339 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
CTNNA1-221ENST00000520339 ABCC10Q5T3U5 1492 aa15.88■□□□□ 0.13
CTNNA1-221ENST00000520339 TTBK1Q5TCY1 1321 aaPredicted RBP15.87■□□□□ 0.13
CTNNA1-221ENST00000520339 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
CTNNA1-221ENST00000520339 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
CTNNA1-221ENST00000520339 RAPGEF2Q9Y4G8 1499 aa15.85■□□□□ 0.13
CTNNA1-221ENST00000520339 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
CTNNA1-221ENST00000520339 ADCY10Q96PN6 1610 aa15.84■□□□□ 0.13
CTNNA1-221ENST00000520339 RTN4Q9NQC3 1192 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-221ENST00000520339 AMER1Q5JTC6 1135 aaPredicted RBP15.81■□□□□ 0.12
CTNNA1-221ENST00000520339 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
CTNNA1-221ENST00000520339 IQGAP2Q13576 1575 aa15.79■□□□□ 0.12
CTNNA1-221ENST00000520339 CAPN15O75808 1086 aa15.78■□□□□ 0.12
CTNNA1-221ENST00000520339 UACAQ9BZF9 1416 aa15.77■□□□□ 0.12
CTNNA1-221ENST00000520339 ABCC2Q92887 1545 aa15.77■□□□□ 0.11
CTNNA1-221ENST00000520339 UGGT2Q9NYU1 1516 aa15.76■□□□□ 0.11
CTNNA1-221ENST00000520339 UHRF1BP1LA0JNW5 1464 aa15.76■□□□□ 0.11
CTNNA1-221ENST00000520339 DIP2BQ9P265 1576 aa15.75■□□□□ 0.11
CTNNA1-221ENST00000520339 KIF13AQ9H1H9 1805 aa15.74■□□□□ 0.11
CTNNA1-221ENST00000520339 PRXQ9BXM0 1461 aa15.73■□□□□ 0.11
CTNNA1-221ENST00000520339 ASXL2Q76L83 1435 aa15.73■□□□□ 0.11
CTNNA1-221ENST00000520339 PLB1Q6P1J6 1458 aa15.72■□□□□ 0.11
CTNNA1-221ENST00000520339 C1QBPQ07021 282 aaKnown RBP15.72■□□□□ 0.11
CTNNA1-221ENST00000520339 POLA2Q14181 598 aa15.72■□□□□ 0.11
CTNNA1-221ENST00000520339 MKRN4PQ13434 485 aaPredicted RBP15.7■□□□□ 0.1
CTNNA1-221ENST00000520339 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
CTNNA1-221ENST00000520339 SPDYE4A6NLX3 237 aa15.66■□□□□ 0.1
CTNNA1-221ENST00000520339 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
CTNNA1-221ENST00000520339 GOLGA3Q08378 1498 aa15.64■□□□□ 0.09
CTNNA1-221ENST00000520339 GLI2P10070 1586 aa15.63■□□□□ 0.09
CTNNA1-221ENST00000520339 EPRSP07814 1512 aaKnown RBP15.62■□□□□ 0.09
CTNNA1-221ENST00000520339 KDM4FA0A1W2PPD8 638 aa15.59■□□□□ 0.09
CTNNA1-221ENST00000520339 P3H3Q8IVL6 736 aa15.59■□□□□ 0.09
CTNNA1-221ENST00000520339 KDM6BO15054 1643 aa15.57■□□□□ 0.08
CTNNA1-221ENST00000520339 COL17A1Q9UMD9 1497 aaPredicted RBP15.56■□□□□ 0.08
CTNNA1-221ENST00000520339 WDR7Q9Y4E6 1490 aa15.56■□□□□ 0.08
CTNNA1-221ENST00000520339 ABCA8O94911 1581 aa15.55■□□□□ 0.08
CTNNA1-221ENST00000520339 FAM9AQ8IZU1 332 aaPredicted RBP15.55■□□□□ 0.08
CTNNA1-221ENST00000520339 KCNH8Q96L42 1107 aa15.55■□□□□ 0.08
CTNNA1-221ENST00000520339 EEA1Q15075 1411 aa15.54■□□□□ 0.08
CTNNA1-221ENST00000520339 ABCB7O75027 752 aa15.54■□□□□ 0.08
CTNNA1-221ENST00000520339 ZCCHC11Q5TAX3 1644 aaKnown RBP15.53■□□□□ 0.08
CTNNA1-221ENST00000520339 TSPOAP1O95153 1857 aa15.52■□□□□ 0.07
CTNNA1-221ENST00000520339 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
CTNNA1-221ENST00000520339 TEX14Q8IWB6 1497 aa15.51■□□□□ 0.07
CTNNA1-221ENST00000520339 PPRC1Q5VV67 1664 aaKnown RBP15.5■□□□□ 0.07
CTNNA1-221ENST00000520339 CTTNBP2Q8WZ74 1663 aa15.5■□□□□ 0.07
CTNNA1-221ENST00000520339 CD109Q6YHK3 1445 aa15.5■□□□□ 0.07
CTNNA1-221ENST00000520339 ATP10BO94823 1461 aa15.49■□□□□ 0.07
CTNNA1-221ENST00000520339 FBXO3Q9UK99 471 aa15.49■□□□□ 0.07
CTNNA1-221ENST00000520339 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
CTNNA1-221ENST00000520339 MAGI3Q5TCQ9 1506 aa15.47■□□□□ 0.07
CTNNA1-221ENST00000520339 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms