RNA–Protein interactions for RNA: ENST00000518858.1

CLVS1-204, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,980 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-204ENST00000518858 DNMBPQ6XZF7 1577 aa12.23□□□□□ -0.45
CLVS1-204ENST00000518858 TSHZ2Q9NRE2 1034 aa12.22□□□□□ -0.45
CLVS1-204ENST00000518858 IFT140Q96RY7 1462 aa12.18□□□□□ -0.46
CLVS1-204ENST00000518858 ZNF316A6NFI3 1004 aaPredicted RBP12.17□□□□□ -0.46
CLVS1-204ENST00000518858 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
CLVS1-204ENST00000518858 ZNF608Q9ULD9 1512 aaPredicted RBP12.15□□□□□ -0.46
CLVS1-204ENST00000518858 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
CLVS1-204ENST00000518858 CUX1P39880 1505 aa12.13□□□□□ -0.47
CLVS1-204ENST00000518858 TARBP1Q13395 1621 aaKnown RBP12.13□□□□□ -0.47
CLVS1-204ENST00000518858 FGD5Q6ZNL6 1462 aa12.1□□□□□ -0.47
CLVS1-204ENST00000518858 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
CLVS1-204ENST00000518858 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
CLVS1-204ENST00000518858 SOGA1O94964 1423 aa12.09□□□□□ -0.47
CLVS1-204ENST00000518858 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
CLVS1-204ENST00000518858 ATF5Q9Y2D1 282 aaPredicted RBP12.08□□□□□ -0.48
CLVS1-204ENST00000518858 AQRO60306 1485 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLVS1-204ENST00000518858 ATXN8OSP0DMR3 200 aa12.05□□□□□ -0.48
CLVS1-204ENST00000518858 MSH5O43196 834 aa12.04□□□□□ -0.48
CLVS1-204ENST00000518858 OSCARQ8IYS5 282 aa12.03□□□□□ -0.48
CLVS1-204ENST00000518858 TDRD9Q8NDG6 1382 aaKnown RBP12.03□□□□□ -0.48
CLVS1-204ENST00000518858 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
CLVS1-204ENST00000518858 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
CLVS1-204ENST00000518858 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
CLVS1-204ENST00000518858 TOP2BQ02880 1626 aa12.01□□□□□ -0.49
CLVS1-204ENST00000518858 BIVM-ERCC5R4GMW8 1640 aa12.01□□□□□ -0.49
CLVS1-204ENST00000518858 SYNJ1O43426 1573 aa12□□□□□ -0.49
CLVS1-204ENST00000518858 BCANQ96GW7 911 aa12□□□□□ -0.49
CLVS1-204ENST00000518858 CHD1O14646 1710 aa11.98□□□□□ -0.49
CLVS1-204ENST00000518858 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
CLVS1-204ENST00000518858 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
CLVS1-204ENST00000518858 GRIN2BQ13224 1484 aa11.95□□□□□ -0.5
CLVS1-204ENST00000518858 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
CLVS1-204ENST00000518858 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
CLVS1-204ENST00000518858 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
CLVS1-204ENST00000518858 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
CLVS1-204ENST00000518858 ABCA5Q8WWZ7 1642 aa11.94□□□□□ -0.5
CLVS1-204ENST00000518858 FBLN2P98095 1184 aa11.94□□□□□ -0.5
CLVS1-204ENST00000518858 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
CLVS1-204ENST00000518858 MAGI1Q96QZ7 1491 aaPredicted RBP11.93□□□□□ -0.5
CLVS1-204ENST00000518858 ANO8Q9HCE9 1232 aaPredicted RBP11.92□□□□□ -0.5
CLVS1-204ENST00000518858 RBM19Q9Y4C8 960 aaKnown RBP11.9□□□□□ -0.5
CLVS1-204ENST00000518858 CHMP7Q8WUX9 453 aaPredicted RBP11.89□□□□□ -0.51
CLVS1-204ENST00000518858 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
CLVS1-204ENST00000518858 SYNJ2O15056 1496 aa11.88□□□□□ -0.51
CLVS1-204ENST00000518858 CLSPNQ9HAW4 1339 aa11.88□□□□□ -0.51
CLVS1-204ENST00000518858 RIMBP3CA6NJZ7 1639 aa11.86□□□□□ -0.51
CLVS1-204ENST00000518858 RIMBP3BA6NNM3 1639 aa11.86□□□□□ -0.51
CLVS1-204ENST00000518858 RIMBP3Q9UFD9 1639 aa11.86□□□□□ -0.51
CLVS1-204ENST00000518858 APLP2Q06481 763 aa11.86□□□□□ -0.51
CLVS1-204ENST00000518858 ARHGEF11O15085 1522 aa11.84□□□□□ -0.51
CLVS1-204ENST00000518858 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
CLVS1-204ENST00000518858 ADAMTS12P58397 1594 aa11.83□□□□□ -0.52
CLVS1-204ENST00000518858 CLASP1Q7Z460 1538 aa11.82□□□□□ -0.52
CLVS1-204ENST00000518858 ITGAEP38570 1179 aa11.81□□□□□ -0.52
CLVS1-204ENST00000518858 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
CLVS1-204ENST00000518858 FHAD1B1AJZ9 1412 aa11.8□□□□□ -0.52
CLVS1-204ENST00000518858 KCNH8Q96L42 1107 aa11.77□□□□□ -0.52
CLVS1-204ENST00000518858 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
CLVS1-204ENST00000518858 CEP170Q5SW79 1584 aa11.76□□□□□ -0.53
CLVS1-204ENST00000518858 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
CLVS1-204ENST00000518858 CCDC136Q96JN2 1154 aa11.76□□□□□ -0.53
CLVS1-204ENST00000518858 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
CLVS1-204ENST00000518858 NUP160Q12769 1436 aa11.75□□□□□ -0.53
CLVS1-204ENST00000518858 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
CLVS1-204ENST00000518858 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
CLVS1-204ENST00000518858 IGF1RP08069 1367 aa11.74□□□□□ -0.53
CLVS1-204ENST00000518858 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
CLVS1-204ENST00000518858 DEKP35659 375 aaKnown RBP11.73□□□□□ -0.53
CLVS1-204ENST00000518858 CUL7Q14999 1698 aa11.72□□□□□ -0.53
CLVS1-204ENST00000518858 SHROOM2Q13796 1616 aa11.68□□□□□ -0.54
CLVS1-204ENST00000518858 ERCC6L2Q5T890 1561 aa11.67□□□□□ -0.54
CLVS1-204ENST00000518858 CARMIL1Q5VZK9 1371 aa11.66□□□□□ -0.54
CLVS1-204ENST00000518858 RUSC2Q8N2Y8 1516 aa11.66□□□□□ -0.54
CLVS1-204ENST00000518858 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
CLVS1-204ENST00000518858 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
CLVS1-204ENST00000518858 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
CLVS1-204ENST00000518858 PRG4Q92954 1404 aaPredicted RBP11.62□□□□□ -0.55
CLVS1-204ENST00000518858 IFNLR1Q8IU57 520 aaPredicted RBP11.62□□□□□ -0.55
CLVS1-204ENST00000518858 KIAA0586Q9BVV6 1533 aa11.62□□□□□ -0.55
CLVS1-204ENST00000518858 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
CLVS1-204ENST00000518858 KDM2AQ9Y2K7 1162 aa11.6□□□□□ -0.55
CLVS1-204ENST00000518858 NEFLP07196 543 aa11.6□□□□□ -0.55
CLVS1-204ENST00000518858 NBR1Q14596 966 aa11.59□□□□□ -0.55
CLVS1-204ENST00000518858 RAPGEF2Q9Y4G8 1499 aa11.58□□□□□ -0.55
CLVS1-204ENST00000518858 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
CLVS1-204ENST00000518858 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
CLVS1-204ENST00000518858 PKD2Q13563 968 aa11.58□□□□□ -0.56
CLVS1-204ENST00000518858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLVS1-204ENST00000518858 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
CLVS1-204ENST00000518858 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
CLVS1-204ENST00000518858 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
CLVS1-204ENST00000518858 IQGAP2Q13576 1575 aa11.55□□□□□ -0.56
CLVS1-204ENST00000518858 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
CLVS1-204ENST00000518858 TRIM52Q96A61 297 aa11.55□□□□□ -0.56
CLVS1-204ENST00000518858 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
CLVS1-204ENST00000518858 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
CLVS1-204ENST00000518858 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
CLVS1-204ENST00000518858 IRX6P78412 446 aaPredicted RBP11.52□□□□□ -0.56
CLVS1-204ENST00000518858 UBE2Q2Q8WVN8 375 aa11.52□□□□□ -0.57
CLVS1-204ENST00000518858 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms