RNA–Protein interactions for RNA: ENST00000518858.1

CLVS1-204, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,980 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-204ENST00000518858 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
CLVS1-204ENST00000518858 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
CLVS1-204ENST00000518858 NISCHQ9Y2I1 1504 aa16.77■□□□□ 0.28
CLVS1-204ENST00000518858 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
CLVS1-204ENST00000518858 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
CLVS1-204ENST00000518858 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
CLVS1-204ENST00000518858 EHMT2Q96KQ7 1210 aa14.75□□□□□ -0.05
CLVS1-204ENST00000518858 SENP3Q9H4L4 574 aaPredicted RBP14.72□□□□□ -0.05
CLVS1-204ENST00000518858 ABCC9O60706 1549 aa14.7□□□□□ -0.06
CLVS1-204ENST00000518858 ADRA2BP18089 450 aa14.51□□□□□ -0.09
CLVS1-204ENST00000518858 KCNA4P22459 653 aa14.46□□□□□ -0.09
CLVS1-204ENST00000518858 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
CLVS1-204ENST00000518858 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
CLVS1-204ENST00000518858 NACADO15069 1562 aa14.06□□□□□ -0.16
CLVS1-204ENST00000518858 DCAF8L2P0C7V8 631 aa14.05□□□□□ -0.16
CLVS1-204ENST00000518858 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
CLVS1-204ENST00000518858 MYO15BQ96JP2 1530 aa13.95□□□□□ -0.18
CLVS1-204ENST00000518858 ZCCHC6Q5VYS8 1495 aaKnown RBP13.95□□□□□ -0.18
CLVS1-204ENST00000518858 HRCP23327 699 aa13.92□□□□□ -0.18
CLVS1-204ENST00000518858 DCAF1Q9Y4B6 1507 aa13.86□□□□□ -0.19
CLVS1-204ENST00000518858 UNC13AQ9UPW8 1703 aa13.82□□□□□ -0.2
CLVS1-204ENST00000518858 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
CLVS1-204ENST00000518858 FOXD1Q16676 465 aa13.8□□□□□ -0.2
CLVS1-204ENST00000518858 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
CLVS1-204ENST00000518858 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.2
CLVS1-204ENST00000518858 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLVS1-204ENST00000518858 BICRAQ9NZM4 1560 aa13.69□□□□□ -0.22
CLVS1-204ENST00000518858 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
CLVS1-204ENST00000518858 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
CLVS1-204ENST00000518858 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
CLVS1-204ENST00000518858 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
CLVS1-204ENST00000518858 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
CLVS1-204ENST00000518858 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
CLVS1-204ENST00000518858 ZBTB22O15209 634 aa13.41□□□□□ -0.26
CLVS1-204ENST00000518858 EIF4G1Q04637 1599 aaKnown RBP13.33□□□□□ -0.28
CLVS1-204ENST00000518858 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
CLVS1-204ENST00000518858 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
CLVS1-204ENST00000518858 CC2D2AQ9P2K1 1620 aa13.3□□□□□ -0.28
CLVS1-204ENST00000518858 MYT1Q01538 1121 aa13.3□□□□□ -0.28
CLVS1-204ENST00000518858 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
CLVS1-204ENST00000518858 SUPT5HO00267 1087 aaKnown RBP13.22□□□□□ -0.29
CLVS1-204ENST00000518858 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
CLVS1-204ENST00000518858 CECR2Q9BXF3 1484 aa13.21□□□□□ -0.29
CLVS1-204ENST00000518858 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
CLVS1-204ENST00000518858 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
CLVS1-204ENST00000518858 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
CLVS1-204ENST00000518858 NCAPD3P42695 1498 aa12.98□□□□□ -0.33
CLVS1-204ENST00000518858 ATAD2BQ9ULI0 1458 aa12.97□□□□□ -0.33
CLVS1-204ENST00000518858 NEUROD1Q13562 356 aa12.96□□□□□ -0.33
CLVS1-204ENST00000518858 SMARCA2P51531 1590 aa12.96□□□□□ -0.34
CLVS1-204ENST00000518858 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
CLVS1-204ENST00000518858 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
CLVS1-204ENST00000518858 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
CLVS1-204ENST00000518858 HMGXB3Q12766 1538 aa12.91□□□□□ -0.34
CLVS1-204ENST00000518858 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
CLVS1-204ENST00000518858 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.35
CLVS1-204ENST00000518858 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
CLVS1-204ENST00000518858 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
CLVS1-204ENST00000518858 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
CLVS1-204ENST00000518858 ZEB1P37275 1124 aaPredicted RBP12.81□□□□□ -0.36
CLVS1-204ENST00000518858 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
CLVS1-204ENST00000518858 WIZO95785 1651 aa12.8□□□□□ -0.36
CLVS1-204ENST00000518858 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
CLVS1-204ENST00000518858 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
CLVS1-204ENST00000518858 NESP48681 1621 aa12.7□□□□□ -0.38
CLVS1-204ENST00000518858 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
CLVS1-204ENST00000518858 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
CLVS1-204ENST00000518858 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
CLVS1-204ENST00000518858 MAPK8IP2Q13387 824 aaPredicted RBP12.66□□□□□ -0.38
CLVS1-204ENST00000518858 LAMC3Q9Y6N6 1575 aa12.66□□□□□ -0.38
CLVS1-204ENST00000518858 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
CLVS1-204ENST00000518858 FAM9AQ8IZU1 332 aaPredicted RBP12.61□□□□□ -0.39
CLVS1-204ENST00000518858 CADPSQ9ULU8 1353 aa12.59□□□□□ -0.39
CLVS1-204ENST00000518858 FKBP8Q14318 412 aa12.58□□□□□ -0.4
CLVS1-204ENST00000518858 KIF21AQ7Z4S6 1674 aa12.57□□□□□ -0.4
CLVS1-204ENST00000518858 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
CLVS1-204ENST00000518858 CUX2O14529 1486 aa12.56□□□□□ -0.4
CLVS1-204ENST00000518858 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
CLVS1-204ENST00000518858 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
CLVS1-204ENST00000518858 YTHDC1Q96MU7 727 aaKnown RBP12.53□□□□□ -0.4
CLVS1-204ENST00000518858 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.4
CLVS1-204ENST00000518858 CFTRP13569 1480 aa12.51□□□□□ -0.41
CLVS1-204ENST00000518858 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
CLVS1-204ENST00000518858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
CLVS1-204ENST00000518858 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
CLVS1-204ENST00000518858 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
CLVS1-204ENST00000518858 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
CLVS1-204ENST00000518858 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
CLVS1-204ENST00000518858 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
CLVS1-204ENST00000518858 WDR62O43379 1518 aa12.41□□□□□ -0.42
CLVS1-204ENST00000518858 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
CLVS1-204ENST00000518858 CCER1Q8TC90 406 aaPredicted RBP12.39□□□□□ -0.43
CLVS1-204ENST00000518858 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
CLVS1-204ENST00000518858 URB2Q14146 1524 aaKnown RBP12.34□□□□□ -0.43
CLVS1-204ENST00000518858 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
CLVS1-204ENST00000518858 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.44
CLVS1-204ENST00000518858 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
CLVS1-204ENST00000518858 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
CLVS1-204ENST00000518858 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
CLVS1-204ENST00000518858 MIER1Q8N108 512 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms