RNA–Protein interactions for RNA: ENST00000518592.5

CLVS1-203, Transcript of clavesin 1, humanhuman

TSL 1 (best) BASIC

Gene CLVS1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-203ENST00000518592 P3H3Q8IVL6 736 aa8.69□□□□□ -1.02
CLVS1-203ENST00000518592 CUX2O14529 1486 aa8.69□□□□□ -1.02
CLVS1-203ENST00000518592 MAPKBP1O60336 1514 aa8.68□□□□□ -1.02
CLVS1-203ENST00000518592 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
CLVS1-203ENST00000518592 SETD5Q9C0A6 1442 aa8.66□□□□□ -1.02
CLVS1-203ENST00000518592 PHLDB1Q86UU1 1377 aa8.66□□□□□ -1.02
CLVS1-203ENST00000518592 WDR97A6NE52 1622 aa8.65□□□□□ -1.02
CLVS1-203ENST00000518592 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
CLVS1-203ENST00000518592 IGF1RP08069 1367 aa8.64□□□□□ -1.03
CLVS1-203ENST00000518592 PPP1R15AO75807 674 aaPredicted RBP8.63□□□□□ -1.03
CLVS1-203ENST00000518592 FOXD1Q16676 465 aa8.63□□□□□ -1.03
CLVS1-203ENST00000518592 TIAM1Q13009 1591 aa8.62□□□□□ -1.03
CLVS1-203ENST00000518592 CARMIL1Q5VZK9 1371 aa8.62□□□□□ -1.03
CLVS1-203ENST00000518592 CFTRP13569 1480 aa8.61□□□□□ -1.03
CLVS1-203ENST00000518592 NCAPD3P42695 1498 aa8.61□□□□□ -1.03
CLVS1-203ENST00000518592 LRRC9Q6ZRR7 1453 aa8.61□□□□□ -1.03
CLVS1-203ENST00000518592 NEFLP07196 543 aa8.61□□□□□ -1.03
CLVS1-203ENST00000518592 ANP32CO43423 234 aa8.6□□□□□ -1.03
CLVS1-203ENST00000518592 HMGXB3Q12766 1538 aa8.58□□□□□ -1.04
CLVS1-203ENST00000518592 RBM19Q9Y4C8 960 aaKnown RBP8.57□□□□□ -1.04
CLVS1-203ENST00000518592 FHOD3Q2V2M9 1422 aa8.57□□□□□ -1.04
CLVS1-203ENST00000518592 IRX6P78412 446 aaPredicted RBP8.55□□□□□ -1.04
CLVS1-203ENST00000518592 TONSLQ96HA7 1378 aa8.55□□□□□ -1.04
CLVS1-203ENST00000518592 FGD5Q6ZNL6 1462 aa8.55□□□□□ -1.04
CLVS1-203ENST00000518592 FHAD1B1AJZ9 1412 aa8.55□□□□□ -1.04
CLVS1-203ENST00000518592 MAP3K1Q13233 1512 aa8.55□□□□□ -1.04
CLVS1-203ENST00000518592 PCF11O94913 1555 aaKnown RBP8.55□□□□□ -1.04
CLVS1-203ENST00000518592 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
CLVS1-203ENST00000518592 TIMELESSQ9UNS1 1208 aa8.53□□□□□ -1.04
CLVS1-203ENST00000518592 HNRNPUQ00839 825 aaKnown RBP eCLIP8.52□□□□□ -1.04
CLVS1-203ENST00000518592 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.05
CLVS1-203ENST00000518592 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
CLVS1-203ENST00000518592 BCL11AQ9H165 835 aa8.49□□□□□ -1.05
CLVS1-203ENST00000518592 MTUS2Q5JR59 1369 aa8.49□□□□□ -1.05
CLVS1-203ENST00000518592 PTPRKQ15262 1439 aa8.49□□□□□ -1.05
CLVS1-203ENST00000518592 CCDC18Q5T9S5 1454 aa8.49□□□□□ -1.05
CLVS1-203ENST00000518592 FGD6Q6ZV73 1430 aa8.49□□□□□ -1.05
CLVS1-203ENST00000518592 CFAP43Q8NDM7 1665 aa8.49□□□□□ -1.05
CLVS1-203ENST00000518592 MSH5O43196 834 aa8.48□□□□□ -1.05
CLVS1-203ENST00000518592 CHIC2Q9UKJ5 165 aa8.48□□□□□ -1.05
CLVS1-203ENST00000518592 RRP7BPQ9NSQ0 103 aa8.47□□□□□ -1.05
CLVS1-203ENST00000518592 FYCO1Q9BQS8 1478 aa8.47□□□□□ -1.05
CLVS1-203ENST00000518592 CASKIN1Q8WXD9 1431 aa8.47□□□□□ -1.05
CLVS1-203ENST00000518592 HSPA5P11021 654 aaKnown RBP8.46□□□□□ -1.06
CLVS1-203ENST00000518592 AQRO60306 1485 aaKnown RBP eCLIP8.46□□□□□ -1.06
CLVS1-203ENST00000518592 UACAQ9BZF9 1416 aa8.46□□□□□ -1.06
CLVS1-203ENST00000518592 CCDC184Q52MB2 194 aa8.45□□□□□ -1.06
CLVS1-203ENST00000518592 HFM1A2PYH4 1435 aa8.45□□□□□ -1.06
CLVS1-203ENST00000518592 WASHC2AQ641Q2 1341 aa8.45□□□□□ -1.06
CLVS1-203ENST00000518592 FANCD2Q9BXW9 1451 aa8.45□□□□□ -1.06
CLVS1-203ENST00000518592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.44□□□□□ -1.06
CLVS1-203ENST00000518592 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
CLVS1-203ENST00000518592 NAIPQ13075 1403 aa8.44□□□□□ -1.06
CLVS1-203ENST00000518592 ARID3CA6NKF2 412 aa8.43□□□□□ -1.06
CLVS1-203ENST00000518592 FMN1Q68DA7 1419 aa8.43□□□□□ -1.06
CLVS1-203ENST00000518592 CNGB1Q14028 1251 aaPredicted RBP8.43□□□□□ -1.06
CLVS1-203ENST00000518592 FAM9BQ8IZU0 186 aa8.43□□□□□ -1.06
CLVS1-203ENST00000518592 PRDM2Q13029 1718 aa8.42□□□□□ -1.06
CLVS1-203ENST00000518592 PTPN23Q9H3S7 1636 aa8.42□□□□□ -1.06
CLVS1-203ENST00000518592 POLA1P09884 1462 aaPredicted RBP8.42□□□□□ -1.06
CLVS1-203ENST00000518592 NCOA2Q15596 1464 aa8.42□□□□□ -1.06
CLVS1-203ENST00000518592 EFCAB5A4FU69 1503 aa8.41□□□□□ -1.06
CLVS1-203ENST00000518592 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
CLVS1-203ENST00000518592 TDRD9Q8NDG6 1382 aaKnown RBP8.41□□□□□ -1.06
CLVS1-203ENST00000518592 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
CLVS1-203ENST00000518592 MYOM3Q5VTT5 1437 aa8.4□□□□□ -1.06
CLVS1-203ENST00000518592 EIF4G2P78344 907 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLVS1-203ENST00000518592 C11orf95C9JLR9 678 aaPredicted RBP8.4□□□□□ -1.06
CLVS1-203ENST00000518592 ABCA10Q8WWZ4 1543 aa8.4□□□□□ -1.07
CLVS1-203ENST00000518592 KDM5BQ9UGL1 1544 aa8.4□□□□□ -1.07
CLVS1-203ENST00000518592 NESP48681 1621 aa8.4□□□□□ -1.07
CLVS1-203ENST00000518592 B4GALNT3Q6L9W6 998 aa8.4□□□□□ -1.07
CLVS1-203ENST00000518592 TOPBP1Q92547 1522 aa8.39□□□□□ -1.07
CLVS1-203ENST00000518592 L3MBTL2Q969R5 705 aa8.39□□□□□ -1.07
CLVS1-203ENST00000518592 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
CLVS1-203ENST00000518592 SENP3-EIF4A1A0A087X0R7 540 aa8.38□□□□□ -1.07
CLVS1-203ENST00000518592 FANCIQ9NVI1 1328 aa8.37□□□□□ -1.07
CLVS1-203ENST00000518592 DNMBPQ6XZF7 1577 aa8.37□□□□□ -1.07
CLVS1-203ENST00000518592 MPHOSPH9Q99550 1183 aa8.37□□□□□ -1.07
CLVS1-203ENST00000518592 PRKRIP1Q9H875 184 aaPredicted RBP8.37□□□□□ -1.07
CLVS1-203ENST00000518592 PPP4R2Q9NY27 417 aa8.37□□□□□ -1.07
CLVS1-203ENST00000518592 DENND4BO75064 1496 aaPredicted RBP8.36□□□□□ -1.07
CLVS1-203ENST00000518592 POLR3GLQ9BT43 218 aa8.36□□□□□ -1.07
CLVS1-203ENST00000518592 CTTNBP2Q8WZ74 1663 aa8.35□□□□□ -1.07
CLVS1-203ENST00000518592 CNTLNQ9NXG0 1405 aa8.35□□□□□ -1.07
CLVS1-203ENST00000518592 GRIN2BQ13224 1484 aa8.35□□□□□ -1.07
CLVS1-203ENST00000518592 NBPF8Q3BBV2 869 aa8.35□□□□□ -1.07
CLVS1-203ENST00000518592 LRRIQ1Q96JM4 1722 aa8.35□□□□□ -1.07
CLVS1-203ENST00000518592 CCDC7Q96M83 1385 aa8.34□□□□□ -1.07
CLVS1-203ENST00000518592 MAGI3Q5TCQ9 1506 aa8.34□□□□□ -1.07
CLVS1-203ENST00000518592 CUL7Q14999 1698 aa8.34□□□□□ -1.07
CLVS1-203ENST00000518592 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.07
CLVS1-203ENST00000518592 KDM6BO15054 1643 aa8.34□□□□□ -1.07
CLVS1-203ENST00000518592 SUPT6HQ7KZ85 1726 aaKnown RBP8.33□□□□□ -1.08
CLVS1-203ENST00000518592 EHBP1L1Q8N3D4 1523 aa8.32□□□□□ -1.08
CLVS1-203ENST00000518592 UGGT2Q9NYU1 1516 aa8.32□□□□□ -1.08
CLVS1-203ENST00000518592 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
CLVS1-203ENST00000518592 KIF7Q2M1P5 1343 aa8.32□□□□□ -1.08
CLVS1-203ENST00000518592 ZBED9Q6R2W3 1325 aa8.32□□□□□ -1.08
CLVS1-203ENST00000518592 GAPVD1Q14C86 1478 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms