RNA–Protein interactions for RNA: ENST00000518592.5

CLVS1-203, Transcript of clavesin 1, humanhuman

TSL 1 (best) BASIC

Gene CLVS1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-203ENST00000518592 NISCHQ9Y2I1 1504 aa12.01□□□□□ -0.49
CLVS1-203ENST00000518592 AEBP2Q6ZN18 517 aaPredicted RBP10.68□□□□□ -0.7
CLVS1-203ENST00000518592 SHROOM4Q9ULL8 1493 aa10.6□□□□□ -0.71
CLVS1-203ENST00000518592 SUPT5HO00267 1087 aaKnown RBP10.48□□□□□ -0.73
CLVS1-203ENST00000518592 CHIC1Q5VXU3 224 aa10.33□□□□□ -0.76
CLVS1-203ENST00000518592 DCAF8L2P0C7V8 631 aa10.18□□□□□ -0.78
CLVS1-203ENST00000518592 MYO15BQ96JP2 1530 aa10.18□□□□□ -0.78
CLVS1-203ENST00000518592 ZCCHC6Q5VYS8 1495 aaKnown RBP10.17□□□□□ -0.78
CLVS1-203ENST00000518592 HRCP23327 699 aa10.15□□□□□ -0.79
CLVS1-203ENST00000518592 PCGF6Q9BYE7 350 aa10.12□□□□□ -0.79
CLVS1-203ENST00000518592 PPARGC1BQ86YN6 1023 aaKnown RBP10.03□□□□□ -0.8
CLVS1-203ENST00000518592 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
CLVS1-203ENST00000518592 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
CLVS1-203ENST00000518592 DCAF1Q9Y4B6 1507 aa9.83□□□□□ -0.84
CLVS1-203ENST00000518592 TRIM26Q12899 539 aaPredicted RBP9.78□□□□□ -0.84
CLVS1-203ENST00000518592 EHMT2Q96KQ7 1210 aa9.72□□□□□ -0.85
CLVS1-203ENST00000518592 FAM9AQ8IZU1 332 aaPredicted RBP9.71□□□□□ -0.85
CLVS1-203ENST00000518592 TRIM41Q8WV44 630 aa9.67□□□□□ -0.86
CLVS1-203ENST00000518592 ABCC9O60706 1549 aa9.62□□□□□ -0.87
CLVS1-203ENST00000518592 RSF1Q96T23 1441 aaPredicted RBP9.62□□□□□ -0.87
CLVS1-203ENST00000518592 SCRIBQ14160 1630 aa9.59□□□□□ -0.87
CLVS1-203ENST00000518592 ZEB1P37275 1124 aaPredicted RBP9.59□□□□□ -0.87
CLVS1-203ENST00000518592 RB1CC1Q8TDY2 1594 aa9.55□□□□□ -0.88
CLVS1-203ENST00000518592 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
CLVS1-203ENST00000518592 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
CLVS1-203ENST00000518592 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
CLVS1-203ENST00000518592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.46□□□□□ -0.9
CLVS1-203ENST00000518592 CECR2Q9BXF3 1484 aa9.45□□□□□ -0.9
CLVS1-203ENST00000518592 TTBK1Q5TCY1 1321 aaPredicted RBP9.43□□□□□ -0.9
CLVS1-203ENST00000518592 CCER1Q8TC90 406 aaPredicted RBP9.42□□□□□ -0.9
CLVS1-203ENST00000518592 MROH2BQ7Z745 1585 aa9.4□□□□□ -0.91
CLVS1-203ENST00000518592 PELP1Q8IZL8 1130 aaKnown RBP9.38□□□□□ -0.91
CLVS1-203ENST00000518592 WIZO95785 1651 aa9.34□□□□□ -0.91
CLVS1-203ENST00000518592 NEUROD1Q13562 356 aa9.34□□□□□ -0.92
CLVS1-203ENST00000518592 ACIN1Q9UKV3 1341 aaKnown RBP9.32□□□□□ -0.92
CLVS1-203ENST00000518592 DIEXFQ68CQ4 756 aaKnown RBP9.3□□□□□ -0.92
CLVS1-203ENST00000518592 GTF3C3Q9Y5Q9 886 aa9.27□□□□□ -0.93
CLVS1-203ENST00000518592 NACADO15069 1562 aa9.26□□□□□ -0.93
CLVS1-203ENST00000518592 ABCC8Q09428 1581 aa9.25□□□□□ -0.93
CLVS1-203ENST00000518592 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
CLVS1-203ENST00000518592 BAZ1AQ9NRL2 1556 aaPredicted RBP9.23□□□□□ -0.93
CLVS1-203ENST00000518592 CEP162Q5TB80 1403 aa9.23□□□□□ -0.93
CLVS1-203ENST00000518592 CENPBP07199 599 aaPredicted RBP9.22□□□□□ -0.93
CLVS1-203ENST00000518592 UBTFP17480 764 aaKnown RBP9.22□□□□□ -0.93
CLVS1-203ENST00000518592 SOGA1O94964 1423 aa9.21□□□□□ -0.93
CLVS1-203ENST00000518592 EIF4G1Q04637 1599 aaKnown RBP9.2□□□□□ -0.94
CLVS1-203ENST00000518592 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
CLVS1-203ENST00000518592 WRNQ14191 1432 aaPredicted RBP eCLIP9.17□□□□□ -0.94
CLVS1-203ENST00000518592 CSRNP3Q8WYN3 585 aa9.17□□□□□ -0.94
CLVS1-203ENST00000518592 RUSC2Q8N2Y8 1516 aa9.17□□□□□ -0.94
CLVS1-203ENST00000518592 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.94
CLVS1-203ENST00000518592 HNRNPUL2Q1KMD3 747 aaKnown RBP9.15□□□□□ -0.94
CLVS1-203ENST00000518592 TNIKQ9UKE5 1360 aa9.15□□□□□ -0.94
CLVS1-203ENST00000518592 TOP2AP11388 1531 aaKnown RBP9.14□□□□□ -0.95
CLVS1-203ENST00000518592 PHF23Q9BUL5 403 aaPredicted RBP9.12□□□□□ -0.95
CLVS1-203ENST00000518592 SMARCA2P51531 1590 aa9.12□□□□□ -0.95
CLVS1-203ENST00000518592 RANGAP1P46060 587 aaPredicted RBP9.11□□□□□ -0.95
CLVS1-203ENST00000518592 MIER1Q8N108 512 aa9.1□□□□□ -0.95
CLVS1-203ENST00000518592 SMARCA4P51532 1647 aa9.09□□□□□ -0.95
CLVS1-203ENST00000518592 GOLGA3Q08378 1498 aa9.07□□□□□ -0.96
CLVS1-203ENST00000518592 PABPN1Q86U42 306 aaKnown RBP eCLIP9.07□□□□□ -0.96
CLVS1-203ENST00000518592 EEA1Q15075 1411 aa9.06□□□□□ -0.96
CLVS1-203ENST00000518592 APLP2Q06481 763 aa9.02□□□□□ -0.97
CLVS1-203ENST00000518592 CLIP1P30622 1438 aa9.02□□□□□ -0.97
CLVS1-203ENST00000518592 CEP164Q9UPV0 1460 aa8.99□□□□□ -0.97
CLVS1-203ENST00000518592 SYNJ1O43426 1573 aa8.97□□□□□ -0.97
CLVS1-203ENST00000518592 VPS8Q8N3P4 1428 aa8.96□□□□□ -0.97
CLVS1-203ENST00000518592 RAPGEF2Q9Y4G8 1499 aa8.96□□□□□ -0.98
CLVS1-203ENST00000518592 UNC13AQ9UPW8 1703 aa8.96□□□□□ -0.98
CLVS1-203ENST00000518592 KIF21BO75037 1637 aa8.92□□□□□ -0.98
CLVS1-203ENST00000518592 MYT1Q01538 1121 aa8.92□□□□□ -0.98
CLVS1-203ENST00000518592 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.99
CLVS1-203ENST00000518592 ITGAEP38570 1179 aa8.88□□□□□ -0.99
CLVS1-203ENST00000518592 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
CLVS1-203ENST00000518592 BICRAQ9NZM4 1560 aa8.87□□□□□ -0.99
CLVS1-203ENST00000518592 BAZ1BQ9UIG0 1483 aaKnown RBP8.87□□□□□ -0.99
CLVS1-203ENST00000518592 ATAD2BQ9ULI0 1458 aa8.86□□□□□ -0.99
CLVS1-203ENST00000518592 SUPT16HQ9Y5B9 1047 aaKnown RBP8.85□□□□□ -0.99
CLVS1-203ENST00000518592 PEG3Q9GZU2 1588 aa8.84□□□□□ -0.99
CLVS1-203ENST00000518592 ARAP1Q96P48 1450 aa8.82□□□□□ -1
CLVS1-203ENST00000518592 CLSPNQ9HAW4 1339 aa8.82□□□□□ -1
CLVS1-203ENST00000518592 KCNH8Q96L42 1107 aa8.82□□□□□ -1
CLVS1-203ENST00000518592 PRXQ9BXM0 1461 aa8.79□□□□□ -1
CLVS1-203ENST00000518592 TOP2BQ02880 1626 aa8.79□□□□□ -1
CLVS1-203ENST00000518592 BCANQ96GW7 911 aa8.77□□□□□ -1.01
CLVS1-203ENST00000518592 CCNB3Q8WWL7 1395 aa8.77□□□□□ -1.01
CLVS1-203ENST00000518592 RRBP1Q9P2E9 1410 aaKnown RBP8.76□□□□□ -1.01
CLVS1-203ENST00000518592 TSHZ2Q9NRE2 1034 aa8.75□□□□□ -1.01
CLVS1-203ENST00000518592 ERICH3Q5RHP9 1530 aa8.75□□□□□ -1.01
CLVS1-203ENST00000518592 RAB3GAP2Q9H2M9 1393 aa8.73□□□□□ -1.01
CLVS1-203ENST00000518592 DDX10Q13206 875 aaKnown RBP8.73□□□□□ -1.01
CLVS1-203ENST00000518592 KIF27Q86VH2 1401 aa8.73□□□□□ -1.01
CLVS1-203ENST00000518592 SIN3AQ96ST3 1273 aa8.72□□□□□ -1.01
CLVS1-203ENST00000518592 HIRIP3Q9BW71 556 aaPredicted RBP8.72□□□□□ -1.01
CLVS1-203ENST00000518592 ARHGAP35Q9NRY4 1499 aa8.72□□□□□ -1.01
CLVS1-203ENST00000518592 CUX1P39880 1505 aa8.72□□□□□ -1.01
CLVS1-203ENST00000518592 FAM50AQ14320 339 aaKnown RBP8.71□□□□□ -1.01
CLVS1-203ENST00000518592 BIVM-ERCC5R4GMW8 1640 aa8.71□□□□□ -1.01
CLVS1-203ENST00000518592 ATP1B4Q9UN42 357 aaPredicted RBP8.71□□□□□ -1.02
CLVS1-203ENST00000518592 FKBP8Q14318 412 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 997.4 ms