RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 WDR62O43379 1518 aa25.02■■□□□ 1.6
LRRCC1-203ENST00000517875 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
LRRCC1-203ENST00000517875 CCDC136Q96JN2 1154 aa25.01■■□□□ 1.59
LRRCC1-203ENST00000517875 CUX2O14529 1486 aa24.94■■□□□ 1.58
LRRCC1-203ENST00000517875 DAXXQ9UER7 740 aaPredicted RBP24.93■■□□□ 1.58
LRRCC1-203ENST00000517875 EEA1Q15075 1411 aa24.92■■□□□ 1.58
LRRCC1-203ENST00000517875 KIF27Q86VH2 1401 aa24.92■■□□□ 1.58
LRRCC1-203ENST00000517875 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.58
LRRCC1-203ENST00000517875 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
LRRCC1-203ENST00000517875 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
LRRCC1-203ENST00000517875 FANCIQ9NVI1 1328 aa24.83■■□□□ 1.56
LRRCC1-203ENST00000517875 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
LRRCC1-203ENST00000517875 PKNOX2Q96KN3 472 aa24.78■■□□□ 1.56
LRRCC1-203ENST00000517875 IGF1RP08069 1367 aa24.78■■□□□ 1.56
LRRCC1-203ENST00000517875 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
LRRCC1-203ENST00000517875 BCANQ96GW7 911 aa24.75■■□□□ 1.55
LRRCC1-203ENST00000517875 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.55
LRRCC1-203ENST00000517875 ZNF608Q9ULD9 1512 aaPredicted RBP24.74■■□□□ 1.55
LRRCC1-203ENST00000517875 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
LRRCC1-203ENST00000517875 ABCA5Q8WWZ7 1642 aa24.68■■□□□ 1.54
LRRCC1-203ENST00000517875 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.66■■□□□ 1.54
LRRCC1-203ENST00000517875 TNIKQ9UKE5 1360 aa24.66■■□□□ 1.54
LRRCC1-203ENST00000517875 GOLGA3Q08378 1498 aa24.66■■□□□ 1.54
LRRCC1-203ENST00000517875 UBTFP17480 764 aaKnown RBP24.65■■□□□ 1.54
LRRCC1-203ENST00000517875 PRXQ9BXM0 1461 aa24.65■■□□□ 1.54
LRRCC1-203ENST00000517875 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.54
LRRCC1-203ENST00000517875 RAPGEF2Q9Y4G8 1499 aa24.62■■□□□ 1.53
LRRCC1-203ENST00000517875 CEP162Q5TB80 1403 aa24.62■■□□□ 1.53
LRRCC1-203ENST00000517875 PLEKHG5O94827 1062 aa24.61■■□□□ 1.53
LRRCC1-203ENST00000517875 FKBP8Q14318 412 aa24.61■■□□□ 1.53
LRRCC1-203ENST00000517875 KIF21BO75037 1637 aa24.59■■□□□ 1.53
LRRCC1-203ENST00000517875 ERICH3Q5RHP9 1530 aa24.58■■□□□ 1.53
LRRCC1-203ENST00000517875 EIF4G3O43432 1585 aaKnown RBP24.57■■□□□ 1.52
LRRCC1-203ENST00000517875 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
LRRCC1-203ENST00000517875 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
LRRCC1-203ENST00000517875 IL27Q8NEV9 243 aa24.49■■□□□ 1.51
LRRCC1-203ENST00000517875 CUL7Q14999 1698 aa24.48■■□□□ 1.51
LRRCC1-203ENST00000517875 PODXL2Q9NZ53 605 aa24.48■■□□□ 1.51
LRRCC1-203ENST00000517875 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.5
LRRCC1-203ENST00000517875 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
LRRCC1-203ENST00000517875 RANGAP1P46060 587 aaPredicted RBP24.42■■□□□ 1.5
LRRCC1-203ENST00000517875 FBLN2P98095 1184 aa24.4■■□□□ 1.5
LRRCC1-203ENST00000517875 ITGAEP38570 1179 aa24.39■■□□□ 1.5
LRRCC1-203ENST00000517875 RTN4Q9NQC3 1192 aaKnown RBP24.39■■□□□ 1.49
LRRCC1-203ENST00000517875 ADAMTS12P58397 1594 aa24.38■■□□□ 1.49
LRRCC1-203ENST00000517875 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
LRRCC1-203ENST00000517875 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
LRRCC1-203ENST00000517875 NEFLP07196 543 aa24.37■■□□□ 1.49
LRRCC1-203ENST00000517875 CLIP1P30622 1438 aa24.31■■□□□ 1.48
LRRCC1-203ENST00000517875 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
LRRCC1-203ENST00000517875 NBR1Q14596 966 aa24.27■■□□□ 1.48
LRRCC1-203ENST00000517875 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
LRRCC1-203ENST00000517875 CDK11AQ9UQ88 783 aaPredicted RBP24.23■■□□□ 1.47
LRRCC1-203ENST00000517875 NOP58Q9Y2X3 529 aaKnown RBP24.18■■□□□ 1.46
LRRCC1-203ENST00000517875 CTTNBP2Q8WZ74 1663 aa24.15■■□□□ 1.46
LRRCC1-203ENST00000517875 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
LRRCC1-203ENST00000517875 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
LRRCC1-203ENST00000517875 RTL5Q5HYW3 569 aaPredicted RBP24.11■■□□□ 1.45
LRRCC1-203ENST00000517875 CEP170Q5SW79 1584 aa24.11■■□□□ 1.45
LRRCC1-203ENST00000517875 CHD1O14646 1710 aa24.1■■□□□ 1.45
LRRCC1-203ENST00000517875 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
LRRCC1-203ENST00000517875 NUP160Q12769 1436 aa24.09■■□□□ 1.45
LRRCC1-203ENST00000517875 ARHGAP35Q9NRY4 1499 aa24.08■■□□□ 1.45
LRRCC1-203ENST00000517875 KCNH8Q96L42 1107 aa24.08■■□□□ 1.44
LRRCC1-203ENST00000517875 IQGAP2Q13576 1575 aa24.06■■□□□ 1.44
LRRCC1-203ENST00000517875 GLIPR1L2Q4G1C9 344 aa24.03■■□□□ 1.44
LRRCC1-203ENST00000517875 C11orf95C9JLR9 678 aaPredicted RBP24.03■■□□□ 1.44
LRRCC1-203ENST00000517875 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
LRRCC1-203ENST00000517875 JPH4Q96JJ6 628 aa24.02■■□□□ 1.44
LRRCC1-203ENST00000517875 PAK3O75914 559 aaPredicted RBP24.01■■□□□ 1.43
LRRCC1-203ENST00000517875 ZMYND15Q9H091 742 aa23.99■■□□□ 1.43
LRRCC1-203ENST00000517875 FHOD3Q2V2M9 1422 aa23.96■■□□□ 1.43
LRRCC1-203ENST00000517875 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
LRRCC1-203ENST00000517875 UGGT2Q9NYU1 1516 aa23.94■■□□□ 1.42
LRRCC1-203ENST00000517875 SAMD9Q5K651 1589 aa23.91■■□□□ 1.42
LRRCC1-203ENST00000517875 OSCARQ8IYS5 282 aa23.91■■□□□ 1.42
LRRCC1-203ENST00000517875 RSPH6AQ9H0K4 717 aa23.91■■□□□ 1.42
LRRCC1-203ENST00000517875 WASHC2AQ641Q2 1341 aa23.9■■□□□ 1.42
LRRCC1-203ENST00000517875 DISP1Q96F81 1524 aa23.88■■□□□ 1.41
LRRCC1-203ENST00000517875 TIMELESSQ9UNS1 1208 aa23.87■■□□□ 1.41
LRRCC1-203ENST00000517875 WASHC2CQ9Y4E1 1318 aa23.85■■□□□ 1.41
LRRCC1-203ENST00000517875 VSIG10Q8N0Z9 540 aa23.84■■□□□ 1.41
LRRCC1-203ENST00000517875 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
LRRCC1-203ENST00000517875 ATP1B4Q9UN42 357 aaPredicted RBP23.83■■□□□ 1.41
LRRCC1-203ENST00000517875 CARMIL2Q6F5E8 1435 aa23.82■■□□□ 1.4
LRRCC1-203ENST00000517875 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
LRRCC1-203ENST00000517875 KIAA0556O60303 1618 aa23.81■■□□□ 1.4
LRRCC1-203ENST00000517875 FMN1Q68DA7 1419 aa23.79■■□□□ 1.4
LRRCC1-203ENST00000517875 SHROOM2Q13796 1616 aa23.75■■□□□ 1.39
LRRCC1-203ENST00000517875 BRPF3Q9ULD4 1205 aa23.72■■□□□ 1.39
LRRCC1-203ENST00000517875 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
LRRCC1-203ENST00000517875 IPO9Q96P70 1041 aaKnown RBP23.72■■□□□ 1.39
LRRCC1-203ENST00000517875 ERCC6L2Q5T890 1561 aa23.71■■□□□ 1.39
LRRCC1-203ENST00000517875 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
LRRCC1-203ENST00000517875 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
LRRCC1-203ENST00000517875 TRIM52Q96A61 297 aa23.69■■□□□ 1.38
LRRCC1-203ENST00000517875 USP35Q9P2H5 1018 aa23.69■■□□□ 1.38
LRRCC1-203ENST00000517875 PCF11O94913 1555 aaKnown RBP23.69■■□□□ 1.38
LRRCC1-203ENST00000517875 PTPRGP23470 1445 aa23.67■■□□□ 1.38
LRRCC1-203ENST00000517875 ZBTB47Q9UFB7 747 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms