RNA–Protein interactions for RNA: ENST00000517875.5

LRRCC1-203, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 2,385 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-203ENST00000517875 NISCHQ9Y2I1 1504 aa35.09■■■■□ 3.21
LRRCC1-203ENST00000517875 CCDC180Q9P1Z9 1646 aa30.64■■■□□ 2.5
LRRCC1-203ENST00000517875 PELP1Q8IZL8 1130 aaKnown RBP30.54■■■□□ 2.48
LRRCC1-203ENST00000517875 MYT1Q01538 1121 aa29.82■■■□□ 2.36
LRRCC1-203ENST00000517875 ABCC9O60706 1549 aa29.47■■■□□ 2.31
LRRCC1-203ENST00000517875 HRCP23327 699 aa29.44■■■□□ 2.3
LRRCC1-203ENST00000517875 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
LRRCC1-203ENST00000517875 DCAF8L2P0C7V8 631 aa29.32■■■□□ 2.28
LRRCC1-203ENST00000517875 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
LRRCC1-203ENST00000517875 MYO15BQ96JP2 1530 aa28.72■■■□□ 2.19
LRRCC1-203ENST00000517875 NACADO15069 1562 aa28.68■■■□□ 2.18
LRRCC1-203ENST00000517875 PPARGC1BQ86YN6 1023 aaKnown RBP28.58■■■□□ 2.17
LRRCC1-203ENST00000517875 SCAF1Q9H7N4 1312 aaKnown RBP28.54■■■□□ 2.16
LRRCC1-203ENST00000517875 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
LRRCC1-203ENST00000517875 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
LRRCC1-203ENST00000517875 TTBK1Q5TCY1 1321 aaPredicted RBP28.46■■■□□ 2.15
LRRCC1-203ENST00000517875 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
LRRCC1-203ENST00000517875 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
LRRCC1-203ENST00000517875 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
LRRCC1-203ENST00000517875 PABPN1Q86U42 306 aaKnown RBP eCLIP27.81■■■□□ 2.04
LRRCC1-203ENST00000517875 BICRAQ9NZM4 1560 aa27.69■■■□□ 2.02
LRRCC1-203ENST00000517875 PRKCSHP14314 528 aaPredicted RBP27.53■■■□□ 2
LRRCC1-203ENST00000517875 BCL11AQ9H165 835 aa27.53■■■□□ 2
LRRCC1-203ENST00000517875 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
LRRCC1-203ENST00000517875 ACIN1Q9UKV3 1341 aaKnown RBP27.46■■□□□ 1.99
LRRCC1-203ENST00000517875 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
LRRCC1-203ENST00000517875 NEUROD1Q13562 356 aa27.25■■□□□ 1.95
LRRCC1-203ENST00000517875 FAM9AQ8IZU1 332 aaPredicted RBP27.24■■□□□ 1.95
LRRCC1-203ENST00000517875 GTF3C3Q9Y5Q9 886 aa27.23■■□□□ 1.95
LRRCC1-203ENST00000517875 CENPBP07199 599 aaPredicted RBP27.23■■□□□ 1.95
LRRCC1-203ENST00000517875 ZEB1P37275 1124 aaPredicted RBP27.21■■□□□ 1.95
LRRCC1-203ENST00000517875 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
LRRCC1-203ENST00000517875 MROH2BQ7Z745 1585 aa27.12■■□□□ 1.93
LRRCC1-203ENST00000517875 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
LRRCC1-203ENST00000517875 SMARCA4P51532 1647 aa27.01■■□□□ 1.91
LRRCC1-203ENST00000517875 ERICH6Q7L0X2 663 aa26.97■■□□□ 1.91
LRRCC1-203ENST00000517875 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.9
LRRCC1-203ENST00000517875 TRIM26Q12899 539 aaPredicted RBP26.89■■□□□ 1.9
LRRCC1-203ENST00000517875 WIZO95785 1651 aa26.86■■□□□ 1.89
LRRCC1-203ENST00000517875 APLP2Q06481 763 aa26.8■■□□□ 1.88
LRRCC1-203ENST00000517875 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
LRRCC1-203ENST00000517875 ANP32EQ9BTT0 268 aa26.67■■□□□ 1.86
LRRCC1-203ENST00000517875 PEG3Q9GZU2 1588 aa26.66■■□□□ 1.86
LRRCC1-203ENST00000517875 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
LRRCC1-203ENST00000517875 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
LRRCC1-203ENST00000517875 CC2D2AQ9P2K1 1620 aa26.6■■□□□ 1.85
LRRCC1-203ENST00000517875 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
LRRCC1-203ENST00000517875 TOP2AP11388 1531 aaKnown RBP26.53■■□□□ 1.84
LRRCC1-203ENST00000517875 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
LRRCC1-203ENST00000517875 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
LRRCC1-203ENST00000517875 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
LRRCC1-203ENST00000517875 CSRNP3Q8WYN3 585 aa26.35■■□□□ 1.81
LRRCC1-203ENST00000517875 CCDC88BA6NC98 1476 aa26.33■■□□□ 1.81
LRRCC1-203ENST00000517875 DIEXFQ68CQ4 756 aaKnown RBP26.22■■□□□ 1.79
LRRCC1-203ENST00000517875 LOC105371045A0A1W2PR82 267 aa26.02■■□□□ 1.76
LRRCC1-203ENST00000517875 TSHZ2Q9NRE2 1034 aa25.91■■□□□ 1.74
LRRCC1-203ENST00000517875 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
LRRCC1-203ENST00000517875 CFTRP13569 1480 aa25.84■■□□□ 1.73
LRRCC1-203ENST00000517875 YTHDC1Q96MU7 727 aaKnown RBP25.81■■□□□ 1.72
LRRCC1-203ENST00000517875 NESP48681 1621 aa25.76■■□□□ 1.71
LRRCC1-203ENST00000517875 TRIM41Q8WV44 630 aa25.76■■□□□ 1.71
LRRCC1-203ENST00000517875 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
LRRCC1-203ENST00000517875 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
LRRCC1-203ENST00000517875 SUPT16HQ9Y5B9 1047 aaKnown RBP25.65■■□□□ 1.7
LRRCC1-203ENST00000517875 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
LRRCC1-203ENST00000517875 ANO8Q9HCE9 1232 aaPredicted RBP25.61■■□□□ 1.69
LRRCC1-203ENST00000517875 PRDM2Q13029 1718 aa25.55■■□□□ 1.68
LRRCC1-203ENST00000517875 FANCD2Q9BXW9 1451 aa25.55■■□□□ 1.68
LRRCC1-203ENST00000517875 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
LRRCC1-203ENST00000517875 CCER1Q8TC90 406 aaPredicted RBP25.51■■□□□ 1.67
LRRCC1-203ENST00000517875 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
LRRCC1-203ENST00000517875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.47■■□□□ 1.67
LRRCC1-203ENST00000517875 UBE2Q2Q8WVN8 375 aa25.44■■□□□ 1.66
LRRCC1-203ENST00000517875 SLC24A1O60721 1099 aa25.42■■□□□ 1.66
LRRCC1-203ENST00000517875 ZNF316A6NFI3 1004 aaPredicted RBP25.41■■□□□ 1.66
LRRCC1-203ENST00000517875 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
LRRCC1-203ENST00000517875 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
LRRCC1-203ENST00000517875 MIER1Q8N108 512 aa25.38■■□□□ 1.65
LRRCC1-203ENST00000517875 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
LRRCC1-203ENST00000517875 CUX1P39880 1505 aa25.36■■□□□ 1.65
LRRCC1-203ENST00000517875 TOP2BQ02880 1626 aa25.31■■□□□ 1.64
LRRCC1-203ENST00000517875 ERCC6Q03468 1493 aa25.28■■□□□ 1.64
LRRCC1-203ENST00000517875 BIVM-ERCC5R4GMW8 1640 aa25.25■■□□□ 1.63
LRRCC1-203ENST00000517875 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
LRRCC1-203ENST00000517875 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
LRRCC1-203ENST00000517875 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.62
LRRCC1-203ENST00000517875 DNMBPQ6XZF7 1577 aa25.2■■□□□ 1.62
LRRCC1-203ENST00000517875 EIF5BO60841 1220 aaKnown RBP25.19■■□□□ 1.62
LRRCC1-203ENST00000517875 SALL2Q9Y467 1007 aaPredicted RBP25.18■■□□□ 1.62
LRRCC1-203ENST00000517875 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
LRRCC1-203ENST00000517875 RBM19Q9Y4C8 960 aaKnown RBP25.16■■□□□ 1.62
LRRCC1-203ENST00000517875 SOGA1O94964 1423 aa25.15■■□□□ 1.62
LRRCC1-203ENST00000517875 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
LRRCC1-203ENST00000517875 EHMT2Q96KQ7 1210 aa25.15■■□□□ 1.62
LRRCC1-203ENST00000517875 ERICH6BQ5W0A0 696 aa25.12■■□□□ 1.61
LRRCC1-203ENST00000517875 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.61
LRRCC1-203ENST00000517875 RUSC2Q8N2Y8 1516 aa25.08■■□□□ 1.61
LRRCC1-203ENST00000517875 MSH5O43196 834 aa25.07■■□□□ 1.6
LRRCC1-203ENST00000517875 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
LRRCC1-203ENST00000517875 DEKP35659 375 aaKnown RBP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms