RNA–Protein interactions for RNA: ENST00000515421.1

CDV3-209, Transcript of CDV3 homolog, humanhuman

TSL 3 BASIC

Gene CDV3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-209ENST00000515421 HOMEZQ8IX15 550 aa14.88□□□□□ -0.03
CDV3-209ENST00000515421 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
CDV3-209ENST00000515421 TOP2AP11388 1531 aaKnown RBP14.84□□□□□ -0.03
CDV3-209ENST00000515421 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
CDV3-209ENST00000515421 PROM2Q8N271 834 aa14.8□□□□□ -0.04
CDV3-209ENST00000515421 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
CDV3-209ENST00000515421 NBR1Q14596 966 aa14.77□□□□□ -0.04
CDV3-209ENST00000515421 TRIM41Q8WV44 630 aa14.76□□□□□ -0.05
CDV3-209ENST00000515421 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDV3-209ENST00000515421 SAMD1Q6SPF0 538 aaPredicted RBP14.73□□□□□ -0.05
CDV3-209ENST00000515421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
CDV3-209ENST00000515421 URB2Q14146 1524 aaKnown RBP14.72□□□□□ -0.05
CDV3-209ENST00000515421 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
CDV3-209ENST00000515421 SPRYD3Q8NCJ5 442 aa14.7□□□□□ -0.06
CDV3-209ENST00000515421 TSHZ2Q9NRE2 1034 aa14.7□□□□□ -0.06
CDV3-209ENST00000515421 TMEM132AQ24JP5 1023 aa14.69□□□□□ -0.06
CDV3-209ENST00000515421 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
CDV3-209ENST00000515421 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
CDV3-209ENST00000515421 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
CDV3-209ENST00000515421 ECM2O94769 699 aaPredicted RBP14.63□□□□□ -0.07
CDV3-209ENST00000515421 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
CDV3-209ENST00000515421 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
CDV3-209ENST00000515421 PRDM2Q13029 1718 aa14.57□□□□□ -0.08
CDV3-209ENST00000515421 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
CDV3-209ENST00000515421 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
CDV3-209ENST00000515421 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.09
CDV3-209ENST00000515421 SPOCK2Q92563 424 aa14.49□□□□□ -0.09
CDV3-209ENST00000515421 EIF4G3O43432 1585 aaKnown RBP14.44□□□□□ -0.1
CDV3-209ENST00000515421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.19e-9■■■□□ 17
CDV3-209ENST00000515421 ARHGEF11O15085 1522 aa14.43□□□□□ -0.1
CDV3-209ENST00000515421 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.12e-11■■□□□ 14.3
CDV3-209ENST00000515421 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
CDV3-209ENST00000515421 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
CDV3-209ENST00000515421 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
CDV3-209ENST00000515421 RGL2O15211 777 aa14.42□□□□□ -0.1
CDV3-209ENST00000515421 POLA1P09884 1462 aaPredicted RBP14.42□□□□□ -0.1
CDV3-209ENST00000515421 TARBP1Q13395 1621 aaKnown RBP14.41□□□□□ -0.1
CDV3-209ENST00000515421 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
CDV3-209ENST00000515421 SOGA1O94964 1423 aa14.4□□□□□ -0.1
CDV3-209ENST00000515421 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
CDV3-209ENST00000515421 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
CDV3-209ENST00000515421 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
CDV3-209ENST00000515421 KLHL34Q8N239 644 aa14.38□□□□□ -0.11
CDV3-209ENST00000515421 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
CDV3-209ENST00000515421 TDRD9Q8NDG6 1382 aaKnown RBP14.36□□□□□ -0.11
CDV3-209ENST00000515421 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
CDV3-209ENST00000515421 RAD54L2Q9Y4B4 1467 aa14.35□□□□□ -0.11
CDV3-209ENST00000515421 CHMP7Q8WUX9 453 aaPredicted RBP14.33□□□□□ -0.12
CDV3-209ENST00000515421 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
CDV3-209ENST00000515421 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
CDV3-209ENST00000515421 MAGI1Q96QZ7 1491 aaPredicted RBP14.31□□□□□ -0.12
CDV3-209ENST00000515421 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
CDV3-209ENST00000515421 SNAPC4Q5SXM2 1469 aa14.28□□□□□ -0.12
CDV3-209ENST00000515421 CHD1O14646 1710 aa14.28□□□□□ -0.12
CDV3-209ENST00000515421 ARAP1Q96P48 1450 aa14.27□□□□□ -0.12
CDV3-209ENST00000515421 CUX1P39880 1505 aa14.26□□□□□ -0.13
CDV3-209ENST00000515421 TRHP20396 242 aaPredicted RBP14.26□□□□□ -0.13
CDV3-209ENST00000515421 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
CDV3-209ENST00000515421 PODXL2Q9NZ53 605 aa14.25□□□□□ -0.13
CDV3-209ENST00000515421 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
CDV3-209ENST00000515421 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
CDV3-209ENST00000515421 APLP2Q06481 763 aa14.23□□□□□ -0.13
CDV3-209ENST00000515421 CLASP1Q7Z460 1538 aa14.22□□□□□ -0.13
CDV3-209ENST00000515421 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
CDV3-209ENST00000515421 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
CDV3-209ENST00000515421 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
CDV3-209ENST00000515421 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
CDV3-209ENST00000515421 HS6ST3Q8IZP7 471 aa14.14□□□□□ -0.15
CDV3-209ENST00000515421 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
CDV3-209ENST00000515421 ABCA5Q8WWZ7 1642 aa14.1□□□□□ -0.15
CDV3-209ENST00000515421 PBRM1Q86U86 1689 aa14.08□□□□□ -0.16
CDV3-209ENST00000515421 GRIN2AQ12879 1464 aa14.07□□□□□ -0.16
CDV3-209ENST00000515421 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
CDV3-209ENST00000515421 NUP160Q12769 1436 aa14.05□□□□□ -0.16
CDV3-209ENST00000515421 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
CDV3-209ENST00000515421 TOP2BQ02880 1626 aa14.04□□□□□ -0.16
CDV3-209ENST00000515421 PLCD3Q8N3E9 789 aa14.03□□□□□ -0.16
CDV3-209ENST00000515421 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
CDV3-209ENST00000515421 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
CDV3-209ENST00000515421 BIVM-ERCC5R4GMW8 1640 aa14.01□□□□□ -0.17
CDV3-209ENST00000515421 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
CDV3-209ENST00000515421 CEP170Q5SW79 1584 aa13.97□□□□□ -0.17
CDV3-209ENST00000515421 BRPF1P55201 1214 aaPredicted RBP13.95□□□□□ -0.18
CDV3-209ENST00000515421 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
CDV3-209ENST00000515421 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
CDV3-209ENST00000515421 PRG4Q92954 1404 aaPredicted RBP13.92□□□□□ -0.18
CDV3-209ENST00000515421 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
CDV3-209ENST00000515421 ERCC6L2Q5T890 1561 aa13.91□□□□□ -0.18
CDV3-209ENST00000515421 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.19
CDV3-209ENST00000515421 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
CDV3-209ENST00000515421 LMOD2Q6P5Q4 547 aa13.88□□□□□ -0.19
CDV3-209ENST00000515421 MIER1Q8N108 512 aa13.86□□□□□ -0.19
CDV3-209ENST00000515421 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
CDV3-209ENST00000515421 UBTFP17480 764 aaKnown RBP13.85□□□□□ -0.19
CDV3-209ENST00000515421 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
CDV3-209ENST00000515421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
CDV3-209ENST00000515421 IGF1RP08069 1367 aa13.83□□□□□ -0.2
CDV3-209ENST00000515421 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
CDV3-209ENST00000515421 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
CDV3-209ENST00000515421 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms