RNA–Protein interactions for RNA: ENST00000514488.1

MATR3-224, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-224ENST00000514488 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
MATR3-224ENST00000514488 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
MATR3-224ENST00000514488 POTEHQ6S545 545 aa16.7■□□□□ 0.26
MATR3-224ENST00000514488 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
MATR3-224ENST00000514488 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
MATR3-224ENST00000514488 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
MATR3-224ENST00000514488 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
MATR3-224ENST00000514488 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
MATR3-224ENST00000514488 SPDYE1Q8NFV5 336 aaPredicted RBP16.63■□□□□ 0.25
MATR3-224ENST00000514488 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
MATR3-224ENST00000514488 CFTRP13569 1480 aa16.61■□□□□ 0.25
MATR3-224ENST00000514488 ARHGEF11O15085 1522 aa16.54■□□□□ 0.24
MATR3-224ENST00000514488 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.24
MATR3-224ENST00000514488 ZNF608Q9ULD9 1512 aaPredicted RBP16.51■□□□□ 0.23
MATR3-224ENST00000514488 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
MATR3-224ENST00000514488 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.23
MATR3-224ENST00000514488 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
MATR3-224ENST00000514488 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
MATR3-224ENST00000514488 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
MATR3-224ENST00000514488 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
MATR3-224ENST00000514488 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
MATR3-224ENST00000514488 CHD1O14646 1710 aa16.42■□□□□ 0.22
MATR3-224ENST00000514488 EIF4G3O43432 1585 aaKnown RBP16.41■□□□□ 0.22
MATR3-224ENST00000514488 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
MATR3-224ENST00000514488 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
MATR3-224ENST00000514488 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
MATR3-224ENST00000514488 PROM2Q8N271 834 aa16.34■□□□□ 0.21
MATR3-224ENST00000514488 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
MATR3-224ENST00000514488 AQRO60306 1485 aaKnown RBP eCLIP16.29■□□□□ 0.2
MATR3-224ENST00000514488 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
MATR3-224ENST00000514488 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
MATR3-224ENST00000514488 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.2
MATR3-224ENST00000514488 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
MATR3-224ENST00000514488 FKBP8Q14318 412 aa16.25■□□□□ 0.19
MATR3-224ENST00000514488 ABCC8Q09428 1581 aa16.22■□□□□ 0.19
MATR3-224ENST00000514488 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
MATR3-224ENST00000514488 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
MATR3-224ENST00000514488 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
MATR3-224ENST00000514488 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.17
MATR3-224ENST00000514488 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
MATR3-224ENST00000514488 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
MATR3-224ENST00000514488 SOGA1O94964 1423 aa16.07■□□□□ 0.16
MATR3-224ENST00000514488 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
MATR3-224ENST00000514488 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
MATR3-224ENST00000514488 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
MATR3-224ENST00000514488 HAX1O00165 279 aa16.03■□□□□ 0.16
MATR3-224ENST00000514488 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
MATR3-224ENST00000514488 MAGI1Q96QZ7 1491 aaPredicted RBP16.01■□□□□ 0.15
MATR3-224ENST00000514488 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
MATR3-224ENST00000514488 FARP1Q9Y4F1 1045 aaPredicted RBP15.99■□□□□ 0.15
MATR3-224ENST00000514488 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
MATR3-224ENST00000514488 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
MATR3-224ENST00000514488 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
MATR3-224ENST00000514488 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
MATR3-224ENST00000514488 CUX1P39880 1505 aa15.96■□□□□ 0.15
MATR3-224ENST00000514488 C19orf67A6NJJ6 358 aa15.93■□□□□ 0.14
MATR3-224ENST00000514488 ERCC6L2Q5T890 1561 aa15.92■□□□□ 0.14
MATR3-224ENST00000514488 SP7Q8TDD2 431 aaPredicted RBP15.88■□□□□ 0.13
MATR3-224ENST00000514488 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
MATR3-224ENST00000514488 EVX2Q03828 476 aa15.84■□□□□ 0.13
MATR3-224ENST00000514488 KIF13AQ9H1H9 1805 aa15.84■□□□□ 0.13
MATR3-224ENST00000514488 FBXO3Q9UK99 471 aa15.83■□□□□ 0.12
MATR3-224ENST00000514488 MNX1P50219 401 aaPredicted RBP15.82■□□□□ 0.12
MATR3-224ENST00000514488 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
MATR3-224ENST00000514488 PLEKHG5O94827 1062 aa15.79■□□□□ 0.12
MATR3-224ENST00000514488 NPM1P06748 294 aaKnown RBP eCLIP15.79■□□□□ 0.12
MATR3-224ENST00000514488 MIER1Q8N108 512 aa15.79■□□□□ 0.12
MATR3-224ENST00000514488 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
MATR3-224ENST00000514488 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
MATR3-224ENST00000514488 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
MATR3-224ENST00000514488 ADAMTS12P58397 1594 aa15.76■□□□□ 0.11
MATR3-224ENST00000514488 SHROOM2Q13796 1616 aa15.75■□□□□ 0.11
MATR3-224ENST00000514488 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
MATR3-224ENST00000514488 NUP160Q12769 1436 aa15.72■□□□□ 0.11
MATR3-224ENST00000514488 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
MATR3-224ENST00000514488 FHAD1B1AJZ9 1412 aa15.63■□□□□ 0.09
MATR3-224ENST00000514488 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
MATR3-224ENST00000514488 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
MATR3-224ENST00000514488 WRNQ14191 1432 aaPredicted RBP eCLIP15.62■□□□□ 0.09
MATR3-224ENST00000514488 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
MATR3-224ENST00000514488 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
MATR3-224ENST00000514488 VASPP50552 380 aaPredicted RBP15.61■□□□□ 0.09
MATR3-224ENST00000514488 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
MATR3-224ENST00000514488 ABCC10Q5T3U5 1492 aa15.59■□□□□ 0.09
MATR3-224ENST00000514488 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
MATR3-224ENST00000514488 BIVM-ERCC5R4GMW8 1640 aa15.59■□□□□ 0.09
MATR3-224ENST00000514488 ZNF579Q8NAF0 562 aaKnown RBP15.59■□□□□ 0.09
MATR3-224ENST00000514488 KDM4FA0A1W2PPD8 638 aa15.58■□□□□ 0.08
MATR3-224ENST00000514488 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
MATR3-224ENST00000514488 KDM6BO15054 1643 aa15.57■□□□□ 0.08
MATR3-224ENST00000514488 TOP2BQ02880 1626 aa15.57■□□□□ 0.08
MATR3-224ENST00000514488 CLCN6P51797 869 aa15.56■□□□□ 0.08
MATR3-224ENST00000514488 ADCY10Q96PN6 1610 aa15.56■□□□□ 0.08
MATR3-224ENST00000514488 MAPKBP1O60336 1514 aa15.55■□□□□ 0.08
MATR3-224ENST00000514488 RUSC2Q8N2Y8 1516 aa15.55■□□□□ 0.08
MATR3-224ENST00000514488 GABBR2O75899 941 aa15.55■□□□□ 0.08
MATR3-224ENST00000514488 ILDR1Q86SU0 546 aaPredicted RBP15.55■□□□□ 0.08
MATR3-224ENST00000514488 JPH4Q96JJ6 628 aa15.55■□□□□ 0.08
MATR3-224ENST00000514488 RASEFQ8IZ41 740 aa15.47■□□□□ 0.07
MATR3-224ENST00000514488 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms