RNA–Protein interactions for RNA: ENST00000514482.1

FRG1-204, Transcript of FSHD region gene 1, humanhuman

TSL 3

Gene FRG1, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-204ENST00000514482 RAD54L2Q9Y4B4 1467 aa11.14□□□□□ -0.63
FRG1-204ENST00000514482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.14□□□□□ -0.635e-7■■■■□ 21.5
FRG1-204ENST00000514482 CUL7Q14999 1698 aa11.14□□□□□ -0.63
FRG1-204ENST00000514482 ERCC6Q03468 1493 aa11.13□□□□□ -0.63
FRG1-204ENST00000514482 IGF1RP08069 1367 aa11.13□□□□□ -0.63
FRG1-204ENST00000514482 MYCNP04198 464 aaPredicted RBP11.11□□□□□ -0.63
FRG1-204ENST00000514482 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
FRG1-204ENST00000514482 CLIP1P30622 1438 aa11.1□□□□□ -0.63
FRG1-204ENST00000514482 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
FRG1-204ENST00000514482 WDR62O43379 1518 aa11.09□□□□□ -0.63
FRG1-204ENST00000514482 ABCA5Q8WWZ7 1642 aa11.09□□□□□ -0.63
FRG1-204ENST00000514482 TARBP1Q13395 1621 aaKnown RBP11.09□□□□□ -0.63
FRG1-204ENST00000514482 GAPVD1Q14C86 1478 aa11.07□□□□□ -0.64
FRG1-204ENST00000514482 PCGF6Q9BYE7 350 aa11.07□□□□□ -0.64
FRG1-204ENST00000514482 PBRM1Q86U86 1689 aa11.06□□□□□ -0.64
FRG1-204ENST00000514482 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
FRG1-204ENST00000514482 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
FRG1-204ENST00000514482 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
FRG1-204ENST00000514482 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
FRG1-204ENST00000514482 VPS8Q8N3P4 1428 aa11.02□□□□□ -0.64
FRG1-204ENST00000514482 RANGAP1P46060 587 aaPredicted RBP11.02□□□□□ -0.65
FRG1-204ENST00000514482 APLP2Q06481 763 aa11.02□□□□□ -0.65
FRG1-204ENST00000514482 RNF39Q9H2S5 420 aa10.99□□□□□ -0.65
FRG1-204ENST00000514482 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
FRG1-204ENST00000514482 GRIN2BQ13224 1484 aa10.98□□□□□ -0.65
FRG1-204ENST00000514482 FHAD1B1AJZ9 1412 aa10.96□□□□□ -0.65
FRG1-204ENST00000514482 AQRO60306 1485 aaKnown RBP eCLIP10.95□□□□□ -0.66
FRG1-204ENST00000514482 ARAP1Q96P48 1450 aa10.95□□□□□ -0.66
FRG1-204ENST00000514482 ADAMTS12P58397 1594 aa10.94□□□□□ -0.66
FRG1-204ENST00000514482 EFCAB5A4FU69 1503 aa10.94□□□□□ -0.66
FRG1-204ENST00000514482 ARHGAP35Q9NRY4 1499 aa10.94□□□□□ -0.66
FRG1-204ENST00000514482 EIF4G3O43432 1585 aaKnown RBP10.94□□□□□ -0.66
FRG1-204ENST00000514482 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
FRG1-204ENST00000514482 PPARGC1BQ86YN6 1023 aaKnown RBP10.93□□□□□ -0.66
FRG1-204ENST00000514482 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
FRG1-204ENST00000514482 MAGI1Q96QZ7 1491 aaPredicted RBP10.89□□□□□ -0.67
FRG1-204ENST00000514482 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
FRG1-204ENST00000514482 TTBK1Q5TCY1 1321 aaPredicted RBP10.86□□□□□ -0.67
FRG1-204ENST00000514482 IQGAP2Q13576 1575 aa10.86□□□□□ -0.67
FRG1-204ENST00000514482 SAMD9Q5K651 1589 aa10.85□□□□□ -0.67
FRG1-204ENST00000514482 FMN1Q68DA7 1419 aa10.84□□□□□ -0.67
FRG1-204ENST00000514482 MAP3K1Q13233 1512 aa10.84□□□□□ -0.67
FRG1-204ENST00000514482 SAMD1Q6SPF0 538 aaPredicted RBP10.84□□□□□ -0.67
FRG1-204ENST00000514482 SYNJ2O15056 1496 aa10.83□□□□□ -0.68
FRG1-204ENST00000514482 GRIN2AQ12879 1464 aa10.83□□□□□ -0.68
FRG1-204ENST00000514482 P3H3Q8IVL6 736 aa10.83□□□□□ -0.68
FRG1-204ENST00000514482 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
FRG1-204ENST00000514482 HRCP23327 699 aa10.82□□□□□ -0.68
FRG1-204ENST00000514482 FHOD3Q2V2M9 1422 aa10.82□□□□□ -0.68
FRG1-204ENST00000514482 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
FRG1-204ENST00000514482 KIAA0586Q9BVV6 1533 aa10.81□□□□□ -0.68
FRG1-204ENST00000514482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
FRG1-204ENST00000514482 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
FRG1-204ENST00000514482 CFAP43Q8NDM7 1665 aa10.81□□□□□ -0.68
FRG1-204ENST00000514482 PCF11O94913 1555 aaKnown RBP10.81□□□□□ -0.68
FRG1-204ENST00000514482 TIAM1Q13009 1591 aa10.81□□□□□ -0.68
FRG1-204ENST00000514482 UGGT2Q9NYU1 1516 aa10.79□□□□□ -0.68
FRG1-204ENST00000514482 CASKIN1Q8WXD9 1431 aa10.79□□□□□ -0.68
FRG1-204ENST00000514482 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
FRG1-204ENST00000514482 ATP1B4Q9UN42 357 aaPredicted RBP10.78□□□□□ -0.68
FRG1-204ENST00000514482 ZEB1P37275 1124 aaPredicted RBP10.77□□□□□ -0.69
FRG1-204ENST00000514482 FBLN2P98095 1184 aa10.77□□□□□ -0.69
FRG1-204ENST00000514482 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
FRG1-204ENST00000514482 CEP170Q5SW79 1584 aa10.75□□□□□ -0.69
FRG1-204ENST00000514482 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
FRG1-204ENST00000514482 HECW1Q76N89 1606 aa10.74□□□□□ -0.69
FRG1-204ENST00000514482 NUP160Q12769 1436 aa10.74□□□□□ -0.69
FRG1-204ENST00000514482 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
FRG1-204ENST00000514482 KIAA0556O60303 1618 aa10.73□□□□□ -0.69
FRG1-204ENST00000514482 CHD1O14646 1710 aa10.73□□□□□ -0.69
FRG1-204ENST00000514482 CCDC18Q5T9S5 1454 aa10.73□□□□□ -0.69
FRG1-204ENST00000514482 CARMIL2Q6F5E8 1435 aa10.72□□□□□ -0.69
FRG1-204ENST00000514482 LRRIQ1Q96JM4 1722 aa10.7□□□□□ -0.7
FRG1-204ENST00000514482 DISP1Q96F81 1524 aa10.69□□□□□ -0.7
FRG1-204ENST00000514482 RRBP1Q9P2E9 1410 aaKnown RBP10.69□□□□□ -0.7
FRG1-204ENST00000514482 MTUS2Q5JR59 1369 aa10.68□□□□□ -0.7
FRG1-204ENST00000514482 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
FRG1-204ENST00000514482 JPH4Q96JJ6 628 aa10.68□□□□□ -0.7
FRG1-204ENST00000514482 CCNB3Q8WWL7 1395 aa10.67□□□□□ -0.7
FRG1-204ENST00000514482 RAPGEF6Q8TEU7 1601 aa10.67□□□□□ -0.7
FRG1-204ENST00000514482 EHBP1L1Q8N3D4 1523 aa10.67□□□□□ -0.7
FRG1-204ENST00000514482 CCER1Q8TC90 406 aaPredicted RBP10.66□□□□□ -0.7
FRG1-204ENST00000514482 ZNF219Q9P2Y4 722 aaPredicted RBP10.65□□□□□ -0.7
FRG1-204ENST00000514482 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
FRG1-204ENST00000514482 CDK11AQ9UQ88 783 aaPredicted RBP10.63□□□□□ -0.71
FRG1-204ENST00000514482 SHROOM2Q13796 1616 aa10.61□□□□□ -0.71
FRG1-204ENST00000514482 PHLDB1Q86UU1 1377 aa10.61□□□□□ -0.71
FRG1-204ENST00000514482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.6□□□□□ -0.71
FRG1-204ENST00000514482 PRG4Q92954 1404 aaPredicted RBP10.59□□□□□ -0.71
FRG1-204ENST00000514482 TRHP20396 242 aaPredicted RBP10.59□□□□□ -0.71
FRG1-204ENST00000514482 FAM50AQ14320 339 aaKnown RBP10.59□□□□□ -0.71
FRG1-204ENST00000514482 NCOA2Q15596 1464 aa10.59□□□□□ -0.71
FRG1-204ENST00000514482 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
FRG1-204ENST00000514482 CAPN15O75808 1086 aa10.58□□□□□ -0.72
FRG1-204ENST00000514482 NUP153P49790 1475 aaKnown RBP10.57□□□□□ -0.72
FRG1-204ENST00000514482 MYOM3Q5VTT5 1437 aa10.57□□□□□ -0.72
FRG1-204ENST00000514482 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
FRG1-204ENST00000514482 ABCA8O94911 1581 aa10.56□□□□□ -0.72
FRG1-204ENST00000514482 PTPRGP23470 1445 aa10.56□□□□□ -0.72
FRG1-204ENST00000514482 PLB1Q6P1J6 1458 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms