RNA–Protein interactions for RNA: ENST00000514482.1

FRG1-204, Transcript of FSHD region gene 1, humanhuman

TSL 3

Gene FRG1, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-204ENST00000514482 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
FRG1-204ENST00000514482 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
FRG1-204ENST00000514482 NISCHQ9Y2I1 1504 aa15.79■□□□□ 0.12
FRG1-204ENST00000514482 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
FRG1-204ENST00000514482 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
FRG1-204ENST00000514482 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
FRG1-204ENST00000514482 FOXD1Q16676 465 aa13.98□□□□□ -0.17
FRG1-204ENST00000514482 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
FRG1-204ENST00000514482 PPP6R1Q9UPN7 881 aa13.63□□□□□ -0.23
FRG1-204ENST00000514482 ADRA2BP18089 450 aa13.56□□□□□ -0.24
FRG1-204ENST00000514482 ZCCHC6Q5VYS8 1495 aaKnown RBP13.27□□□□□ -0.29
FRG1-204ENST00000514482 PIAS4Q8N2W9 510 aaPredicted RBP13.1□□□□□ -0.31
FRG1-204ENST00000514482 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.31
FRG1-204ENST00000514482 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
FRG1-204ENST00000514482 ABCC9O60706 1549 aa12.92□□□□□ -0.34
FRG1-204ENST00000514482 MYO15BQ96JP2 1530 aa12.91□□□□□ -0.34
FRG1-204ENST00000514482 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
FRG1-204ENST00000514482 NACADO15069 1562 aa12.84□□□□□ -0.35
FRG1-204ENST00000514482 RB1CC1Q8TDY2 1594 aa12.72□□□□□ -0.37
FRG1-204ENST00000514482 MSH5O43196 834 aa12.66□□□□□ -0.38
FRG1-204ENST00000514482 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
FRG1-204ENST00000514482 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
FRG1-204ENST00000514482 KCNA4P22459 653 aa12.49□□□□□ -0.41
FRG1-204ENST00000514482 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
FRG1-204ENST00000514482 UNC13AQ9UPW8 1703 aa12.47□□□□□ -0.41
FRG1-204ENST00000514482 MAPK8IP2Q13387 824 aaPredicted RBP12.3□□□□□ -0.44
FRG1-204ENST00000514482 RSF1Q96T23 1441 aaPredicted RBP12.24□□□□□ -0.45
FRG1-204ENST00000514482 BICRAQ9NZM4 1560 aa12.24□□□□□ -0.45
FRG1-204ENST00000514482 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
FRG1-204ENST00000514482 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.46
FRG1-204ENST00000514482 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
FRG1-204ENST00000514482 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
FRG1-204ENST00000514482 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
FRG1-204ENST00000514482 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
FRG1-204ENST00000514482 POTEDQ86YR6 584 aa12.14□□□□□ -0.47
FRG1-204ENST00000514482 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
FRG1-204ENST00000514482 CNKSR2Q8WXI2 1034 aa12.12□□□□□ -0.47
FRG1-204ENST00000514482 WIZO95785 1651 aa12.12□□□□□ -0.47
FRG1-204ENST00000514482 NCBP3Q53F19 620 aaKnown RBP12.11□□□□□ -0.47
FRG1-204ENST00000514482 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
FRG1-204ENST00000514482 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
FRG1-204ENST00000514482 PEG3Q9GZU2 1588 aa11.99□□□□□ -0.49
FRG1-204ENST00000514482 SMARCA2P51531 1590 aa11.96□□□□□ -0.49
FRG1-204ENST00000514482 EIF4G1Q04637 1599 aaKnown RBP11.9□□□□□ -0.5
FRG1-204ENST00000514482 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
FRG1-204ENST00000514482 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
FRG1-204ENST00000514482 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
FRG1-204ENST00000514482 CCDC88BA6NC98 1476 aa11.85□□□□□ -0.51
FRG1-204ENST00000514482 HOXD11P31277 338 aaPredicted RBP11.85□□□□□ -0.51
FRG1-204ENST00000514482 SLC4A1APQ9BWU0 796 aaKnown RBP11.82□□□□□ -0.52
FRG1-204ENST00000514482 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
FRG1-204ENST00000514482 NCAPD3P42695 1498 aa11.79□□□□□ -0.52
FRG1-204ENST00000514482 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
FRG1-204ENST00000514482 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
FRG1-204ENST00000514482 CC2D2AQ9P2K1 1620 aa11.72□□□□□ -0.53
FRG1-204ENST00000514482 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
FRG1-204ENST00000514482 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
FRG1-204ENST00000514482 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
FRG1-204ENST00000514482 ZBTB22O15209 634 aa11.6□□□□□ -0.55
FRG1-204ENST00000514482 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
FRG1-204ENST00000514482 WRNQ14191 1432 aaPredicted RBP eCLIP11.56□□□□□ -0.56
FRG1-204ENST00000514482 CFTRP13569 1480 aa11.55□□□□□ -0.56
FRG1-204ENST00000514482 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
FRG1-204ENST00000514482 CADPSQ9ULU8 1353 aa11.5□□□□□ -0.57
FRG1-204ENST00000514482 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
FRG1-204ENST00000514482 EEA1Q15075 1411 aa11.49□□□□□ -0.57
FRG1-204ENST00000514482 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
FRG1-204ENST00000514482 LOC105371045A0A1W2PR82 267 aa11.48□□□□□ -0.57
FRG1-204ENST00000514482 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
FRG1-204ENST00000514482 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
FRG1-204ENST00000514482 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
FRG1-204ENST00000514482 SOGA1O94964 1423 aa11.39□□□□□ -0.59
FRG1-204ENST00000514482 CUX1P39880 1505 aa11.39□□□□□ -0.59
FRG1-204ENST00000514482 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
FRG1-204ENST00000514482 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
FRG1-204ENST00000514482 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
FRG1-204ENST00000514482 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
FRG1-204ENST00000514482 NESP48681 1621 aa11.33□□□□□ -0.6
FRG1-204ENST00000514482 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
FRG1-204ENST00000514482 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
FRG1-204ENST00000514482 DNMBPQ6XZF7 1577 aa11.32□□□□□ -0.6
FRG1-204ENST00000514482 KIF21BO75037 1637 aa11.31□□□□□ -0.6
FRG1-204ENST00000514482 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
FRG1-204ENST00000514482 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
FRG1-204ENST00000514482 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
FRG1-204ENST00000514482 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.6
FRG1-204ENST00000514482 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
FRG1-204ENST00000514482 TNIKQ9UKE5 1360 aa11.27□□□□□ -0.61
FRG1-204ENST00000514482 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
FRG1-204ENST00000514482 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
FRG1-204ENST00000514482 CUX2O14529 1486 aa11.22□□□□□ -0.61
FRG1-204ENST00000514482 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
FRG1-204ENST00000514482 POLA1P09884 1462 aaPredicted RBP11.19□□□□□ -0.62
FRG1-204ENST00000514482 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
FRG1-204ENST00000514482 ABCA10Q8WWZ4 1543 aa11.19□□□□□ -0.62
FRG1-204ENST00000514482 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
FRG1-204ENST00000514482 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
FRG1-204ENST00000514482 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
FRG1-204ENST00000514482 WDR97A6NE52 1622 aa11.17□□□□□ -0.62
FRG1-204ENST00000514482 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms