RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
DDR1-271ENST00000513240 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
DDR1-271ENST00000513240 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
DDR1-271ENST00000513240 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
DDR1-271ENST00000513240 TDRD9Q8NDG6 1382 aaKnown RBP21.28■■□□□ 1
DDR1-271ENST00000513240 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
DDR1-271ENST00000513240 FHOD3Q2V2M9 1422 aa21.27■■□□□ 1
DDR1-271ENST00000513240 KCNH8Q96L42 1107 aa21.23■□□□□ 0.99
DDR1-271ENST00000513240 PHLDB1Q86UU1 1377 aa21.23■□□□□ 0.99
DDR1-271ENST00000513240 RAB3GAP2Q9H2M9 1393 aa21.22■□□□□ 0.99
DDR1-271ENST00000513240 TSHZ2Q9NRE2 1034 aa21.2■□□□□ 0.98
DDR1-271ENST00000513240 RRBP1Q9P2E9 1410 aaKnown RBP21.15■□□□□ 0.98
DDR1-271ENST00000513240 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.97
DDR1-271ENST00000513240 POLA1P09884 1462 aaPredicted RBP21.1■□□□□ 0.97
DDR1-271ENST00000513240 DDX10Q13206 875 aaKnown RBP21.09■□□□□ 0.97
DDR1-271ENST00000513240 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
DDR1-271ENST00000513240 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
DDR1-271ENST00000513240 LRRC9Q6ZRR7 1453 aa21.05■□□□□ 0.96
DDR1-271ENST00000513240 TIAM1Q13009 1591 aa21■□□□□ 0.95
DDR1-271ENST00000513240 SETD5Q9C0A6 1442 aa21■□□□□ 0.95
DDR1-271ENST00000513240 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
DDR1-271ENST00000513240 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
DDR1-271ENST00000513240 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
DDR1-271ENST00000513240 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
DDR1-271ENST00000513240 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
DDR1-271ENST00000513240 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
DDR1-271ENST00000513240 MAPKBP1O60336 1514 aa20.9■□□□□ 0.94
DDR1-271ENST00000513240 FOXD1Q16676 465 aa20.9■□□□□ 0.94
DDR1-271ENST00000513240 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
DDR1-271ENST00000513240 ABCA10Q8WWZ4 1543 aa20.89■□□□□ 0.94
DDR1-271ENST00000513240 BCANQ96GW7 911 aa20.89■□□□□ 0.93
DDR1-271ENST00000513240 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.935e-8■■■■■ 51
DDR1-271ENST00000513240 TRIM52Q96A61 297 aa20.88■□□□□ 0.93
DDR1-271ENST00000513240 FBLN2P98095 1184 aa20.86■□□□□ 0.93
DDR1-271ENST00000513240 PTPRKQ15262 1439 aa20.85■□□□□ 0.93
DDR1-271ENST00000513240 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
DDR1-271ENST00000513240 GAPVD1Q14C86 1478 aa20.84■□□□□ 0.93
DDR1-271ENST00000513240 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
DDR1-271ENST00000513240 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
DDR1-271ENST00000513240 CASKIN1Q8WXD9 1431 aa20.79■□□□□ 0.92
DDR1-271ENST00000513240 PPP1R15AO75807 674 aaPredicted RBP20.78■□□□□ 0.92
DDR1-271ENST00000513240 FGD6Q6ZV73 1430 aa20.75■□□□□ 0.91
DDR1-271ENST00000513240 PDS5BQ9NTI5 1447 aa20.75■□□□□ 0.91
DDR1-271ENST00000513240 ZNF644Q9H582 1327 aaPredicted RBP20.73■□□□□ 0.91
DDR1-271ENST00000513240 TONSLQ96HA7 1378 aa20.73■□□□□ 0.91
DDR1-271ENST00000513240 FMN1Q68DA7 1419 aa20.72■□□□□ 0.91
DDR1-271ENST00000513240 FYCO1Q9BQS8 1478 aa20.71■□□□□ 0.91
DDR1-271ENST00000513240 ZNF777Q9ULD5 760 aaPredicted RBP20.69■□□□□ 0.9
DDR1-271ENST00000513240 ERICH6Q7L0X2 663 aa20.68■□□□□ 0.9
DDR1-271ENST00000513240 NCOA2Q15596 1464 aa20.68■□□□□ 0.9
DDR1-271ENST00000513240 MAP3K1Q13233 1512 aa20.67■□□□□ 0.9
DDR1-271ENST00000513240 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
DDR1-271ENST00000513240 CCDC18Q5T9S5 1454 aa20.65■□□□□ 0.9
DDR1-271ENST00000513240 RBM19Q9Y4C8 960 aaKnown RBP20.65■□□□□ 0.9
DDR1-271ENST00000513240 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.89
DDR1-271ENST00000513240 SENP3-EIF4A1A0A087X0R7 540 aa20.64■□□□□ 0.89
DDR1-271ENST00000513240 KIF21AQ7Z4S6 1674 aa20.64■□□□□ 0.89
DDR1-271ENST00000513240 CDK13Q14004 1512 aaKnown RBP20.62■□□□□ 0.89
DDR1-271ENST00000513240 CFAP43Q8NDM7 1665 aa20.61■□□□□ 0.89
DDR1-271ENST00000513240 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
DDR1-271ENST00000513240 LAMC3Q9Y6N6 1575 aa20.6■□□□□ 0.89
DDR1-271ENST00000513240 ANP32CO43423 234 aa20.6■□□□□ 0.89
DDR1-271ENST00000513240 FKBP8Q14318 412 aa20.6■□□□□ 0.89
DDR1-271ENST00000513240 EFCAB5A4FU69 1503 aa20.59■□□□□ 0.89
DDR1-271ENST00000513240 MYOM3Q5VTT5 1437 aa20.59■□□□□ 0.89
DDR1-271ENST00000513240 NAIPQ13075 1403 aa20.58■□□□□ 0.88
DDR1-271ENST00000513240 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.88
DDR1-271ENST00000513240 CUL7Q14999 1698 aa20.58■□□□□ 0.88
DDR1-271ENST00000513240 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
DDR1-271ENST00000513240 CTTNBP2Q8WZ74 1663 aa20.56■□□□□ 0.88
DDR1-271ENST00000513240 MSH5O43196 834 aa20.56■□□□□ 0.88
DDR1-271ENST00000513240 GRIN2BQ13224 1484 aa20.55■□□□□ 0.88
DDR1-271ENST00000513240 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
DDR1-271ENST00000513240 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
DDR1-271ENST00000513240 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
DDR1-271ENST00000513240 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
DDR1-271ENST00000513240 MPHOSPH9Q99550 1183 aa20.54■□□□□ 0.88
DDR1-271ENST00000513240 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
DDR1-271ENST00000513240 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
DDR1-271ENST00000513240 L3MBTL2Q969R5 705 aa20.52■□□□□ 0.88
DDR1-271ENST00000513240 HFM1A2PYH4 1435 aa20.5■□□□□ 0.87
DDR1-271ENST00000513240 C11orf95C9JLR9 678 aaPredicted RBP20.48■□□□□ 0.87
DDR1-271ENST00000513240 UACAQ9BZF9 1416 aa20.48■□□□□ 0.87
DDR1-271ENST00000513240 CCDC184Q52MB2 194 aa20.47■□□□□ 0.87
DDR1-271ENST00000513240 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
DDR1-271ENST00000513240 KDM6BO15054 1643 aa20.45■□□□□ 0.86
DDR1-271ENST00000513240 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
DDR1-271ENST00000513240 PTPN23Q9H3S7 1636 aa20.45■□□□□ 0.86
DDR1-271ENST00000513240 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
DDR1-271ENST00000513240 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
DDR1-271ENST00000513240 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
DDR1-271ENST00000513240 HNRNPUQ00839 825 aaKnown RBP eCLIP20.43■□□□□ 0.86
DDR1-271ENST00000513240 NBPF8Q3BBV2 869 aa20.42■□□□□ 0.86
DDR1-271ENST00000513240 WASHC2AQ641Q2 1341 aa20.42■□□□□ 0.86
DDR1-271ENST00000513240 TIMELESSQ9UNS1 1208 aa20.41■□□□□ 0.86
DDR1-271ENST00000513240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.41■□□□□ 0.86
DDR1-271ENST00000513240 CFDP1Q9UEE9 299 aaPredicted RBP20.41■□□□□ 0.86
DDR1-271ENST00000513240 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
DDR1-271ENST00000513240 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
DDR1-271ENST00000513240 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms