RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
PPARGC1A-211ENST00000513205 ZNF692Q9BU19 519 aaPredicted RBP13.9□□□□□ -0.18
PPARGC1A-211ENST00000513205 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.19
PPARGC1A-211ENST00000513205 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
PPARGC1A-211ENST00000513205 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
PPARGC1A-211ENST00000513205 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
PPARGC1A-211ENST00000513205 TOP2BQ02880 1626 aa13.83□□□□□ -0.2
PPARGC1A-211ENST00000513205 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
PPARGC1A-211ENST00000513205 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
PPARGC1A-211ENST00000513205 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
PPARGC1A-211ENST00000513205 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
PPARGC1A-211ENST00000513205 C19orf67A6NJJ6 358 aa13.74□□□□□ -0.21
PPARGC1A-211ENST00000513205 LAMC3Q9Y6N6 1575 aa13.7□□□□□ -0.22
PPARGC1A-211ENST00000513205 KIF21BO75037 1637 aa13.7□□□□□ -0.22
PPARGC1A-211ENST00000513205 SOGA1O94964 1423 aa13.69□□□□□ -0.22
PPARGC1A-211ENST00000513205 FAM9AQ8IZU1 332 aaPredicted RBP13.69□□□□□ -0.22
PPARGC1A-211ENST00000513205 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
PPARGC1A-211ENST00000513205 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
PPARGC1A-211ENST00000513205 GOLGA3Q08378 1498 aa13.68□□□□□ -0.22
PPARGC1A-211ENST00000513205 CUX1P39880 1505 aa13.67□□□□□ -0.22
PPARGC1A-211ENST00000513205 CHADLQ6NUI6 762 aa13.66□□□□□ -0.22
PPARGC1A-211ENST00000513205 TNIKQ9UKE5 1360 aa13.66□□□□□ -0.22
PPARGC1A-211ENST00000513205 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
PPARGC1A-211ENST00000513205 FANCD2Q9BXW9 1451 aa13.62□□□□□ -0.23
PPARGC1A-211ENST00000513205 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
PPARGC1A-211ENST00000513205 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
PPARGC1A-211ENST00000513205 GABBR2O75899 941 aa13.61□□□□□ -0.23
PPARGC1A-211ENST00000513205 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
PPARGC1A-211ENST00000513205 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
PPARGC1A-211ENST00000513205 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
PPARGC1A-211ENST00000513205 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
PPARGC1A-211ENST00000513205 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
PPARGC1A-211ENST00000513205 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
PPARGC1A-211ENST00000513205 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
PPARGC1A-211ENST00000513205 TOPBP1Q92547 1522 aa13.49□□□□□ -0.25
PPARGC1A-211ENST00000513205 UBTFP17480 764 aaKnown RBP13.47□□□□□ -0.25
PPARGC1A-211ENST00000513205 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
PPARGC1A-211ENST00000513205 NESP48681 1621 aa13.45□□□□□ -0.26
PPARGC1A-211ENST00000513205 CUX2O14529 1486 aa13.45□□□□□ -0.26
PPARGC1A-211ENST00000513205 RAPGEF2Q9Y4G8 1499 aa13.45□□□□□ -0.26
PPARGC1A-211ENST00000513205 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
PPARGC1A-211ENST00000513205 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
PPARGC1A-211ENST00000513205 CLIP1P30622 1438 aa13.42□□□□□ -0.26
PPARGC1A-211ENST00000513205 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
PPARGC1A-211ENST00000513205 LHX8Q68G74 356 aa13.4□□□□□ -0.26
PPARGC1A-211ENST00000513205 URB2Q14146 1524 aaKnown RBP13.4□□□□□ -0.26
PPARGC1A-211ENST00000513205 CUL7Q14999 1698 aa13.4□□□□□ -0.26
PPARGC1A-211ENST00000513205 WDR97A6NE52 1622 aa13.39□□□□□ -0.27
PPARGC1A-211ENST00000513205 PCGF6Q9BYE7 350 aa13.39□□□□□ -0.27
PPARGC1A-211ENST00000513205 IGF1RP08069 1367 aa13.37□□□□□ -0.27
PPARGC1A-211ENST00000513205 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
PPARGC1A-211ENST00000513205 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
PPARGC1A-211ENST00000513205 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
PPARGC1A-211ENST00000513205 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
PPARGC1A-211ENST00000513205 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
PPARGC1A-211ENST00000513205 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
PPARGC1A-211ENST00000513205 ABCA5Q8WWZ7 1642 aa13.32□□□□□ -0.28
PPARGC1A-211ENST00000513205 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
PPARGC1A-211ENST00000513205 CLCN6P51797 869 aa13.32□□□□□ -0.28
PPARGC1A-211ENST00000513205 WDR62O43379 1518 aa13.3□□□□□ -0.28
PPARGC1A-211ENST00000513205 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
PPARGC1A-211ENST00000513205 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
PPARGC1A-211ENST00000513205 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
PPARGC1A-211ENST00000513205 GAPVD1Q14C86 1478 aa13.26□□□□□ -0.29
PPARGC1A-211ENST00000513205 CREBZFQ9NS37 354 aa13.26□□□□□ -0.29
PPARGC1A-211ENST00000513205 IFT140Q96RY7 1462 aa13.25□□□□□ -0.29
PPARGC1A-211ENST00000513205 EFCAB5A4FU69 1503 aa13.25□□□□□ -0.29
PPARGC1A-211ENST00000513205 HRCP23327 699 aa13.24□□□□□ -0.29
PPARGC1A-211ENST00000513205 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
PPARGC1A-211ENST00000513205 CTTNBP2Q8WZ74 1663 aa13.21□□□□□ -0.3
PPARGC1A-211ENST00000513205 MAP3K1Q13233 1512 aa13.2□□□□□ -0.3
PPARGC1A-211ENST00000513205 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
PPARGC1A-211ENST00000513205 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
PPARGC1A-211ENST00000513205 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
PPARGC1A-211ENST00000513205 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
PPARGC1A-211ENST00000513205 ERCC6Q03468 1493 aa13.19□□□□□ -0.3
PPARGC1A-211ENST00000513205 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
PPARGC1A-211ENST00000513205 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
PPARGC1A-211ENST00000513205 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
PPARGC1A-211ENST00000513205 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
PPARGC1A-211ENST00000513205 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
PPARGC1A-211ENST00000513205 PBRM1Q86U86 1689 aa13.17□□□□□ -0.3
PPARGC1A-211ENST00000513205 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
PPARGC1A-211ENST00000513205 ADAMTS12P58397 1594 aa13.14□□□□□ -0.31
PPARGC1A-211ENST00000513205 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.316e-7■■■□□ 15.2
PPARGC1A-211ENST00000513205 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
PPARGC1A-211ENST00000513205 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
PPARGC1A-211ENST00000513205 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
PPARGC1A-211ENST00000513205 MAGI1Q96QZ7 1491 aaPredicted RBP13.09□□□□□ -0.31
PPARGC1A-211ENST00000513205 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
PPARGC1A-211ENST00000513205 EIF4G3O43432 1585 aaKnown RBP13.06□□□□□ -0.32
PPARGC1A-211ENST00000513205 TIAM1Q13009 1591 aa13.06□□□□□ -0.32
PPARGC1A-211ENST00000513205 CFAP43Q8NDM7 1665 aa13.05□□□□□ -0.32
PPARGC1A-211ENST00000513205 CASKIN1Q8WXD9 1431 aa13.05□□□□□ -0.32
PPARGC1A-211ENST00000513205 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
PPARGC1A-211ENST00000513205 RANGAP1P46060 587 aaPredicted RBP13.01□□□□□ -0.33
PPARGC1A-211ENST00000513205 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
PPARGC1A-211ENST00000513205 PCF11O94913 1555 aaKnown RBP13□□□□□ -0.33
PPARGC1A-211ENST00000513205 KIAA0586Q9BVV6 1533 aa13□□□□□ -0.33
PPARGC1A-211ENST00000513205 UGGT2Q9NYU1 1516 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms