RNA–Protein interactions for RNA: ENST00000510324.1

CASP6-208, Transcript of caspase 6, humanhuman

TSL 2

Gene CASP6, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-208ENST00000510324 ARHGEF11O15085 1522 aa14.6□□□□□ -0.07
CASP6-208ENST00000510324 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
CASP6-208ENST00000510324 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
CASP6-208ENST00000510324 PRDM2Q13029 1718 aa14.58□□□□□ -0.08
CASP6-208ENST00000510324 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.08
CASP6-208ENST00000510324 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
CASP6-208ENST00000510324 PIP4P2Q8N4L2 257 aa14.55□□□□□ -0.08
CASP6-208ENST00000510324 FBLN2P98095 1184 aa14.54□□□□□ -0.08
CASP6-208ENST00000510324 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
CASP6-208ENST00000510324 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
CASP6-208ENST00000510324 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
CASP6-208ENST00000510324 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
CASP6-208ENST00000510324 CHD1O14646 1710 aa14.46□□□□□ -0.09
CASP6-208ENST00000510324 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
CASP6-208ENST00000510324 AQRO60306 1485 aaKnown RBP eCLIP14.44□□□□□ -0.1
CASP6-208ENST00000510324 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
CASP6-208ENST00000510324 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
CASP6-208ENST00000510324 ARAP1Q96P48 1450 aa14.41□□□□□ -0.1
CASP6-208ENST00000510324 DNMBPQ6XZF7 1577 aa14.4□□□□□ -0.1
CASP6-208ENST00000510324 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
CASP6-208ENST00000510324 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
CASP6-208ENST00000510324 SPDYE2Q495Y8 402 aa14.4□□□□□ -0.1
CASP6-208ENST00000510324 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
CASP6-208ENST00000510324 TARBP1Q13395 1621 aaKnown RBP14.36□□□□□ -0.11
CASP6-208ENST00000510324 HAX1O00165 279 aa14.34□□□□□ -0.11
CASP6-208ENST00000510324 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
CASP6-208ENST00000510324 TDRD9Q8NDG6 1382 aaKnown RBP14.32□□□□□ -0.12
CASP6-208ENST00000510324 SOGA1O94964 1423 aa14.32□□□□□ -0.12
CASP6-208ENST00000510324 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
CASP6-208ENST00000510324 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
CASP6-208ENST00000510324 SNAPC4Q5SXM2 1469 aa14.26□□□□□ -0.13
CASP6-208ENST00000510324 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
CASP6-208ENST00000510324 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
CASP6-208ENST00000510324 CLASP1Q7Z460 1538 aa14.22□□□□□ -0.13
CASP6-208ENST00000510324 CLEC11AQ9Y240 323 aa14.22□□□□□ -0.13
CASP6-208ENST00000510324 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
CASP6-208ENST00000510324 EVX2Q03828 476 aa14.2□□□□□ -0.14
CASP6-208ENST00000510324 SSUH2Q9Y2M2 353 aa14.2□□□□□ -0.14
CASP6-208ENST00000510324 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
CASP6-208ENST00000510324 SPDYE1Q8NFV5 336 aaPredicted RBP14.19□□□□□ -0.14
CASP6-208ENST00000510324 WDR97A6NE52 1622 aa14.19□□□□□ -0.14
CASP6-208ENST00000510324 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
CASP6-208ENST00000510324 SYNJ2O15056 1496 aa14.16□□□□□ -0.14
CASP6-208ENST00000510324 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
CASP6-208ENST00000510324 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
CASP6-208ENST00000510324 CUX1P39880 1505 aa14.11□□□□□ -0.15
CASP6-208ENST00000510324 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
CASP6-208ENST00000510324 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
CASP6-208ENST00000510324 ERCC6L2Q5T890 1561 aa14□□□□□ -0.17
CASP6-208ENST00000510324 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
CASP6-208ENST00000510324 ABCA10Q8WWZ4 1543 aa13.99□□□□□ -0.17
CASP6-208ENST00000510324 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
CASP6-208ENST00000510324 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
CASP6-208ENST00000510324 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
CASP6-208ENST00000510324 CEP170Q5SW79 1584 aa13.96□□□□□ -0.17
CASP6-208ENST00000510324 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
CASP6-208ENST00000510324 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
CASP6-208ENST00000510324 KIF13AQ9H1H9 1805 aa13.93□□□□□ -0.18
CASP6-208ENST00000510324 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
CASP6-208ENST00000510324 WRNQ14191 1432 aaPredicted RBP eCLIP13.92□□□□□ -0.18
CASP6-208ENST00000510324 NUP160Q12769 1436 aa13.91□□□□□ -0.18
CASP6-208ENST00000510324 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
CASP6-208ENST00000510324 FHAD1B1AJZ9 1412 aa13.9□□□□□ -0.18
CASP6-208ENST00000510324 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
CASP6-208ENST00000510324 PRG4Q92954 1404 aaPredicted RBP13.89□□□□□ -0.19
CASP6-208ENST00000510324 SHROOM2Q13796 1616 aa13.88□□□□□ -0.19
CASP6-208ENST00000510324 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
CASP6-208ENST00000510324 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
CASP6-208ENST00000510324 GABBR2O75899 941 aa13.82□□□□□ -0.2
CASP6-208ENST00000510324 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
CASP6-208ENST00000510324 TSPOAP1O95153 1857 aa13.81□□□□□ -0.2
CASP6-208ENST00000510324 TOP2BQ02880 1626 aa13.8□□□□□ -0.2
CASP6-208ENST00000510324 BIVM-ERCC5R4GMW8 1640 aa13.8□□□□□ -0.2
CASP6-208ENST00000510324 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
CASP6-208ENST00000510324 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
CASP6-208ENST00000510324 KDM6BO15054 1643 aa13.78□□□□□ -0.2
CASP6-208ENST00000510324 ILDR1Q86SU0 546 aaPredicted RBP13.76□□□□□ -0.21
CASP6-208ENST00000510324 MAPKBP1O60336 1514 aa13.75□□□□□ -0.21
CASP6-208ENST00000510324 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
CASP6-208ENST00000510324 DIP2BQ9P265 1576 aa13.75□□□□□ -0.21
CASP6-208ENST00000510324 FARP1Q9Y4F1 1045 aaPredicted RBP13.74□□□□□ -0.21
CASP6-208ENST00000510324 ADCY10Q96PN6 1610 aa13.72□□□□□ -0.21
CASP6-208ENST00000510324 RUSC2Q8N2Y8 1516 aa13.71□□□□□ -0.21
CASP6-208ENST00000510324 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
CASP6-208ENST00000510324 KIAA0586Q9BVV6 1533 aa13.65□□□□□ -0.22
CASP6-208ENST00000510324 PTPRGP23470 1445 aa13.64□□□□□ -0.23
CASP6-208ENST00000510324 CARMIL2Q6F5E8 1435 aa13.6□□□□□ -0.23
CASP6-208ENST00000510324 IGF1RP08069 1367 aa13.59□□□□□ -0.23
CASP6-208ENST00000510324 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
CASP6-208ENST00000510324 KIF27Q86VH2 1401 aa13.58□□□□□ -0.24
CASP6-208ENST00000510324 CREBZFQ9NS37 354 aa13.58□□□□□ -0.24
CASP6-208ENST00000510324 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
CASP6-208ENST00000510324 PLB1Q6P1J6 1458 aa13.58□□□□□ -0.24
CASP6-208ENST00000510324 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
CASP6-208ENST00000510324 ASXL2Q76L83 1435 aa13.57□□□□□ -0.24
CASP6-208ENST00000510324 CUL7Q14999 1698 aa13.57□□□□□ -0.24
CASP6-208ENST00000510324 ABCC2Q92887 1545 aa13.56□□□□□ -0.24
CASP6-208ENST00000510324 LHX8Q68G74 356 aa13.56□□□□□ -0.24
CASP6-208ENST00000510324 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
CASP6-208ENST00000510324 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms