RNA–Protein interactions for RNA: ENST00000510324.1

CASP6-208, Transcript of caspase 6, humanhuman

TSL 2

Gene CASP6, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-208ENST00000510324 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
CASP6-208ENST00000510324 CHIC1Q5VXU3 224 aa25.25■■□□□ 1.63
CASP6-208ENST00000510324 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
CASP6-208ENST00000510324 PHF23Q9BUL5 403 aaPredicted RBP22.56■■□□□ 1.2
CASP6-208ENST00000510324 FOXD1Q16676 465 aa21.35■■□□□ 1.01
CASP6-208ENST00000510324 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
CASP6-208ENST00000510324 MSH5O43196 834 aa19.97■□□□□ 0.79
CASP6-208ENST00000510324 PIAS4Q8N2W9 510 aaPredicted RBP19.88■□□□□ 0.77
CASP6-208ENST00000510324 PPP6R1Q9UPN7 881 aa19.87■□□□□ 0.77
CASP6-208ENST00000510324 POTEDQ86YR6 584 aa19.83■□□□□ 0.77
CASP6-208ENST00000510324 ADRA2BP18089 450 aa19.79■□□□□ 0.76
CASP6-208ENST00000510324 NISCHQ9Y2I1 1504 aa19.46■□□□□ 0.71
CASP6-208ENST00000510324 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
CASP6-208ENST00000510324 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
CASP6-208ENST00000510324 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
CASP6-208ENST00000510324 ABCC9O60706 1549 aa17.99■□□□□ 0.47
CASP6-208ENST00000510324 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
CASP6-208ENST00000510324 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
CASP6-208ENST00000510324 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
CASP6-208ENST00000510324 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
CASP6-208ENST00000510324 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
CASP6-208ENST00000510324 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
CASP6-208ENST00000510324 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
CASP6-208ENST00000510324 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
CASP6-208ENST00000510324 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
CASP6-208ENST00000510324 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
CASP6-208ENST00000510324 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
CASP6-208ENST00000510324 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
CASP6-208ENST00000510324 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
CASP6-208ENST00000510324 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
CASP6-208ENST00000510324 NACADO15069 1562 aa16.73■□□□□ 0.27
CASP6-208ENST00000510324 NPM3O75607 178 aaKnown RBP16.65■□□□□ 0.26
CASP6-208ENST00000510324 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
CASP6-208ENST00000510324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
CASP6-208ENST00000510324 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
CASP6-208ENST00000510324 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
CASP6-208ENST00000510324 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
CASP6-208ENST00000510324 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
CASP6-208ENST00000510324 KCNA4P22459 653 aa16.2■□□□□ 0.18
CASP6-208ENST00000510324 U3KPZ7 1027 aaPredicted RBP16.19■□□□□ 0.18
CASP6-208ENST00000510324 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
CASP6-208ENST00000510324 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
CASP6-208ENST00000510324 EIF4G1Q04637 1599 aaKnown RBP16.06■□□□□ 0.16
CASP6-208ENST00000510324 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
CASP6-208ENST00000510324 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
CASP6-208ENST00000510324 DCAF1Q9Y4B6 1507 aa16.01■□□□□ 0.15
CASP6-208ENST00000510324 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
CASP6-208ENST00000510324 CAPN15O75808 1086 aa15.98■□□□□ 0.15
CASP6-208ENST00000510324 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
CASP6-208ENST00000510324 DSG3P32926 999 aa15.94■□□□□ 0.14
CASP6-208ENST00000510324 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
CASP6-208ENST00000510324 APLP2Q06481 763 aa15.63■□□□□ 0.09
CASP6-208ENST00000510324 ABCB7O75027 752 aa15.62■□□□□ 0.09
CASP6-208ENST00000510324 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
CASP6-208ENST00000510324 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
CASP6-208ENST00000510324 ZNF219Q9P2Y4 722 aaPredicted RBP15.6■□□□□ 0.09
CASP6-208ENST00000510324 CUX2O14529 1486 aa15.59■□□□□ 0.09
CASP6-208ENST00000510324 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
CASP6-208ENST00000510324 SAMD1Q6SPF0 538 aaPredicted RBP15.53■□□□□ 0.08
CASP6-208ENST00000510324 POTEHQ6S545 545 aa15.5■□□□□ 0.07
CASP6-208ENST00000510324 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
CASP6-208ENST00000510324 ATAD2BQ9ULI0 1458 aa15.36■□□□□ 0.05
CASP6-208ENST00000510324 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
CASP6-208ENST00000510324 NESP48681 1621 aa15.33■□□□□ 0.04
CASP6-208ENST00000510324 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
CASP6-208ENST00000510324 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
CASP6-208ENST00000510324 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
CASP6-208ENST00000510324 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
CASP6-208ENST00000510324 POLA2Q14181 598 aa15.25■□□□□ 0.03
CASP6-208ENST00000510324 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
CASP6-208ENST00000510324 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
CASP6-208ENST00000510324 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
CASP6-208ENST00000510324 LAMC3Q9Y6N6 1575 aa15.16■□□□□ 0.02
CASP6-208ENST00000510324 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
CASP6-208ENST00000510324 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
CASP6-208ENST00000510324 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
CASP6-208ENST00000510324 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
CASP6-208ENST00000510324 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
CASP6-208ENST00000510324 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
CASP6-208ENST00000510324 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
CASP6-208ENST00000510324 MROH2BQ7Z745 1585 aa15□□□□□ -0.01
CASP6-208ENST00000510324 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
CASP6-208ENST00000510324 MRC2Q9UBG0 1479 aa14.98□□□□□ -0.01
CASP6-208ENST00000510324 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
CASP6-208ENST00000510324 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
CASP6-208ENST00000510324 WDR62O43379 1518 aa14.91□□□□□ -0.02
CASP6-208ENST00000510324 ZBTB22O15209 634 aa14.9□□□□□ -0.02
CASP6-208ENST00000510324 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
CASP6-208ENST00000510324 WIZO95785 1651 aa14.84□□□□□ -0.03
CASP6-208ENST00000510324 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
CASP6-208ENST00000510324 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
CASP6-208ENST00000510324 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
CASP6-208ENST00000510324 CFTRP13569 1480 aa14.71□□□□□ -0.05
CASP6-208ENST00000510324 RIMBP3CA6NJZ7 1639 aa14.7□□□□□ -0.06
CASP6-208ENST00000510324 RIMBP3BA6NNM3 1639 aa14.7□□□□□ -0.06
CASP6-208ENST00000510324 RIMBP3Q9UFD9 1639 aa14.7□□□□□ -0.06
CASP6-208ENST00000510324 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
CASP6-208ENST00000510324 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
CASP6-208ENST00000510324 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
CASP6-208ENST00000510324 CYB5RLQ6IPT4 315 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms