RNA–Protein interactions for RNA: ENST00000508716.1

SKIV2L2-208, Transcript of Superkiller viralicidic activity 2-like 2, human

TSL 2

Gene SKIV2L2, Length 2,185 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L2-208	ENST00000508716	CADPS	Q9ULU8	1353 aa		14.08	□□□□□ -0.16
SKIV2L2-208	ENST00000508716	ERICH3	Q5RHP9	1530 aa		14.08	□□□□□ -0.16
SKIV2L2-208	ENST00000508716	CC2D2A	Q9P2K1	1620 aa		14.06	□□□□□ -0.16
SKIV2L2-208	ENST00000508716	PRDM2	Q13029	1718 aa		14.04	□□□□□ -0.16
SKIV2L2-208	ENST00000508716	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.01	□□□□□ -0.17
SKIV2L2-208	ENST00000508716	ATXN8OS	P0DMR3	200 aa		14	□□□□□ -0.17
SKIV2L2-208	ENST00000508716	CUX2	O14529	1486 aa		13.99	□□□□□ -0.17
SKIV2L2-208	ENST00000508716	ARAP1	Q96P48	1450 aa		13.98	□□□□□ -0.17
SKIV2L2-208	ENST00000508716	FGD5	Q6ZNL6	1462 aa		13.95	□□□□□ -0.18
SKIV2L2-208	ENST00000508716	IGF1R	P08069	1367 aa		13.95	□□□□□ -0.18
SKIV2L2-208	ENST00000508716	KDM2A	Q9Y2K7	1162 aa		13.94	□□□□□ -0.18
SKIV2L2-208	ENST00000508716	SCAF1	Q9H7N4	1312 aa	Known RBP	13.94	□□□□□ -0.18
SKIV2L2-208	ENST00000508716	FANCD2	Q9BXW9	1451 aa		13.93	□□□□□ -0.18
SKIV2L2-208	ENST00000508716	CARMIL1	Q5VZK9	1371 aa		13.9	□□□□□ -0.18
SKIV2L2-208	ENST00000508716	GTF3C3	Q9Y5Q9	886 aa		13.9	□□□□□ -0.18
SKIV2L2-208	ENST00000508716	KANK4	Q5T7N3	995 aa	Predicted RBP	13.89	□□□□□ -0.19
SKIV2L2-208	ENST00000508716	ARHGAP35	Q9NRY4	1499 aa		13.88	□□□□□ -0.19
SKIV2L2-208	ENST00000508716	NES	P48681	1621 aa		13.86	□□□□□ -0.19
SKIV2L2-208	ENST00000508716	HOMEZ	Q8IX15	550 aa		13.85	□□□□□ -0.19
SKIV2L2-208	ENST00000508716	DNMBP	Q6XZF7	1577 aa		13.84	□□□□□ -0.19
SKIV2L2-208	ENST00000508716	FBLN2	P98095	1184 aa		13.83	□□□□□ -0.19
SKIV2L2-208	ENST00000508716	RAD54L2	Q9Y4B4	1467 aa		13.83	□□□□□ -0.2
SKIV2L2-208	ENST00000508716	SLC4A2	P04920	1241 aa		13.82	□□□□□ -0.2
SKIV2L2-208	ENST00000508716	DIEXF	Q68CQ4	756 aa	Known RBP	13.82	□□□□□ -0.2
SKIV2L2-208	ENST00000508716	TOPBP1	Q92547	1522 aa		13.82	□□□□□ -0.2
SKIV2L2-208	ENST00000508716	POLA1	P09884	1462 aa	Predicted RBP	13.8	□□□□□ -0.2
SKIV2L2-208	ENST00000508716	ABCA10	Q8WWZ4	1543 aa		13.78	□□□□□ -0.2
SKIV2L2-208	ENST00000508716	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.78	□□□□□ -0.2
SKIV2L2-208	ENST00000508716	MYCN	P04198	464 aa	Predicted RBP	13.76	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	ERICH6	Q7L0X2	663 aa		13.76	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	LAMC3	Q9Y6N6	1575 aa		13.76	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	P3H3	Q8IVL6	736 aa		13.76	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	RRBP1	Q9P2E9	1410 aa	Known RBP	13.75	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	CCNB3	Q8WWL7	1395 aa		13.73	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	RNF216	Q9NWF9	866 aa	Predicted RBP	13.73	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	URB2	Q14146	1524 aa	Known RBP	13.73	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	ITGAE	P38570	1179 aa		13.71	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.71	□□□□□ -0.21
SKIV2L2-208	ENST00000508716	PDS5B	Q9NTI5	1447 aa		13.71	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	TIAM1	Q13009	1591 aa		13.71	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	FHAD1	B1AJZ9	1412 aa		13.7	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	MAP3K1	Q13233	1512 aa		13.69	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	DHX57	Q6P158	1386 aa	Known RBP	13.69	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	CUL7	Q14999	1698 aa		13.69	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	TDRD9	Q8NDG6	1382 aa	Known RBP	13.68	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	CLSPN	Q9HAW4	1339 aa		13.67	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	LRRC9	Q6ZRR7	1453 aa		13.67	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	FHOD3	Q2V2M9	1422 aa		13.66	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	FBXO3	Q9UK99	471 aa		13.65	□□□□□ -0.22
SKIV2L2-208	ENST00000508716	PCF11	O94913	1555 aa	Known RBP	13.64	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	WDR97	A6NE52	1622 aa		13.64	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	GAPVD1	Q14C86	1478 aa		13.63	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	EFCAB5	A4FU69	1503 aa		13.63	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.63	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	CTTNBP2	Q8WZ74	1663 aa		13.61	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	PHLDB1	Q86UU1	1377 aa		13.61	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	KIF21A	Q7Z4S6	1674 aa		13.61	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	FAM50A	Q14320	339 aa	Known RBP	13.61	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	TMEM132A	Q24JP5	1023 aa		13.61	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.61	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	ABCA5	Q8WWZ7	1642 aa		13.61	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	FYCO1	Q9BQS8	1478 aa		13.6	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	CASKIN1	Q8WXD9	1431 aa		13.6	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	CFAP43	Q8NDM7	1665 aa		13.59	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	PKD2	Q13563	968 aa		13.59	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	ACIN1	Q9UKV3	1341 aa	Known RBP	13.58	□□□□□ -0.23
SKIV2L2-208	ENST00000508716	RAB3GAP2	Q9H2M9	1393 aa		13.57	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	POTED	Q86YR6	584 aa		13.57	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	CFAP44	Q96MT7	982 aa		13.57	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	AQR	O60306	1485 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	FMN1	Q68DA7	1419 aa		13.57	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	CENPB	P07199	599 aa	Predicted RBP	13.56	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	NEUROD1	Q13562	356 aa		13.56	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	BBX	Q8WY36	941 aa	Predicted RBP	13.56	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	SETD5	Q9C0A6	1442 aa		13.54	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	MIER1	Q8N108	512 aa		13.54	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	TARBP1	Q13395	1621 aa	Known RBP	13.53	□□□□□ -0.24
SKIV2L2-208	ENST00000508716	VASP	P50552	380 aa	Predicted RBP	13.51	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	SNAPC4	Q5SXM2	1469 aa		13.51	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	C14orf37	Q86TY3	774 aa		13.51	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	SAMD9	Q5K651	1589 aa		13.51	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	MTUS2	Q5JR59	1369 aa		13.5	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	MRC2	Q9UBG0	1479 aa		13.48	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	YTHDC1	Q96MU7	727 aa	Known RBP	13.48	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	NBR1	Q14596	966 aa		13.48	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.48	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	MAPKBP1	O60336	1514 aa		13.46	□□□□□ -0.25
SKIV2L2-208	ENST00000508716	PBRM1	Q86U86	1689 aa		13.45	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	TSHZ2	Q9NRE2	1034 aa		13.45	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	GRIN2B	Q13224	1484 aa		13.45	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	FGD6	Q6ZV73	1430 aa		13.45	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	NPM1	P06748	294 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.42	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	LRRIQ1	Q96JM4	1722 aa		13.41	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	SIN3A	Q96ST3	1273 aa		13.41	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	ADAMTS12	P58397	1594 aa		13.41	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	NCOA2	Q15596	1464 aa		13.4	□□□□□ -0.26
SKIV2L2-208	ENST00000508716	THOC2	Q8NI27	1593 aa	Known RBP	13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms