RNA–Protein interactions for RNA: ENST00000508716.1

SKIV2L2-208, Transcript of Superkiller viralicidic activity 2-like 2, humanhuman

TSL 2

Gene SKIV2L2, Length 2,185 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L2-208ENST00000508716 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
SKIV2L2-208ENST00000508716 NISCHQ9Y2I1 1504 aa19.58■□□□□ 0.72
SKIV2L2-208ENST00000508716 AEBP2Q6ZN18 517 aaPredicted RBP19.24■□□□□ 0.67
SKIV2L2-208ENST00000508716 PHF23Q9BUL5 403 aaPredicted RBP17.93■□□□□ 0.46
SKIV2L2-208ENST00000508716 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
SKIV2L2-208ENST00000508716 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
SKIV2L2-208ENST00000508716 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
SKIV2L2-208ENST00000508716 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
SKIV2L2-208ENST00000508716 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
SKIV2L2-208ENST00000508716 KCNA4P22459 653 aa16.55■□□□□ 0.24
SKIV2L2-208ENST00000508716 ZCCHC6Q5VYS8 1495 aaKnown RBP16.52■□□□□ 0.24
SKIV2L2-208ENST00000508716 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
SKIV2L2-208ENST00000508716 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
SKIV2L2-208ENST00000508716 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
SKIV2L2-208ENST00000508716 DCAF1Q9Y4B6 1507 aa16.08■□□□□ 0.16
SKIV2L2-208ENST00000508716 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
SKIV2L2-208ENST00000508716 ADRA2BP18089 450 aa15.97■□□□□ 0.15
SKIV2L2-208ENST00000508716 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
SKIV2L2-208ENST00000508716 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
SKIV2L2-208ENST00000508716 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
SKIV2L2-208ENST00000508716 MYO15BQ96JP2 1530 aa15.67■□□□□ 0.1
SKIV2L2-208ENST00000508716 SCRIBQ14160 1630 aa15.64■□□□□ 0.09
SKIV2L2-208ENST00000508716 ABCC9O60706 1549 aa15.62■□□□□ 0.09
SKIV2L2-208ENST00000508716 NACADO15069 1562 aa15.51■□□□□ 0.07
SKIV2L2-208ENST00000508716 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
SKIV2L2-208ENST00000508716 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
SKIV2L2-208ENST00000508716 ZBTB22O15209 634 aa15.29■□□□□ 0.04
SKIV2L2-208ENST00000508716 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
SKIV2L2-208ENST00000508716 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.04
SKIV2L2-208ENST00000508716 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
SKIV2L2-208ENST00000508716 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
SKIV2L2-208ENST00000508716 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
SKIV2L2-208ENST00000508716 PPP4R3CPQ6ZMV5 832 aa15.17■□□□□ 0.02
SKIV2L2-208ENST00000508716 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
SKIV2L2-208ENST00000508716 WIZO95785 1651 aa15.11■□□□□ 0.01
SKIV2L2-208ENST00000508716 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
SKIV2L2-208ENST00000508716 PCGF6Q9BYE7 350 aa15.04■□□□□ -0
SKIV2L2-208ENST00000508716 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
SKIV2L2-208ENST00000508716 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
SKIV2L2-208ENST00000508716 FAM9AQ8IZU1 332 aaPredicted RBP14.98□□□□□ -0.01
SKIV2L2-208ENST00000508716 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
SKIV2L2-208ENST00000508716 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
SKIV2L2-208ENST00000508716 HRCP23327 699 aa14.92□□□□□ -0.02
SKIV2L2-208ENST00000508716 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
SKIV2L2-208ENST00000508716 TOP2AP11388 1531 aaKnown RBP14.89□□□□□ -0.03
SKIV2L2-208ENST00000508716 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
SKIV2L2-208ENST00000508716 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.04
SKIV2L2-208ENST00000508716 PRKCSHP14314 528 aaPredicted RBP14.82□□□□□ -0.04
SKIV2L2-208ENST00000508716 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
SKIV2L2-208ENST00000508716 TRIM26Q12899 539 aaPredicted RBP14.81□□□□□ -0.04
SKIV2L2-208ENST00000508716 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
SKIV2L2-208ENST00000508716 FOXD1Q16676 465 aa14.73□□□□□ -0.05
SKIV2L2-208ENST00000508716 FOXD4L1Q9NU39 408 aa14.73□□□□□ -0.05
SKIV2L2-208ENST00000508716 ABCC8Q09428 1581 aa14.72□□□□□ -0.05
SKIV2L2-208ENST00000508716 FKBP8Q14318 412 aa14.7□□□□□ -0.06
SKIV2L2-208ENST00000508716 PEG3Q9GZU2 1588 aa14.66□□□□□ -0.06
SKIV2L2-208ENST00000508716 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
SKIV2L2-208ENST00000508716 PLCB2Q00722 1185 aa14.61□□□□□ -0.07
SKIV2L2-208ENST00000508716 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
SKIV2L2-208ENST00000508716 BCANQ96GW7 911 aa14.6□□□□□ -0.07
SKIV2L2-208ENST00000508716 TAOK2Q9UL54 1235 aa14.59□□□□□ -0.07
SKIV2L2-208ENST00000508716 DAXXQ9UER7 740 aaPredicted RBP14.57□□□□□ -0.08
SKIV2L2-208ENST00000508716 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
SKIV2L2-208ENST00000508716 SOGA1O94964 1423 aa14.56□□□□□ -0.08
SKIV2L2-208ENST00000508716 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
SKIV2L2-208ENST00000508716 EEA1Q15075 1411 aa14.49□□□□□ -0.09
SKIV2L2-208ENST00000508716 RUSC2Q8N2Y8 1516 aa14.49□□□□□ -0.09
SKIV2L2-208ENST00000508716 UBTFP17480 764 aaKnown RBP14.44□□□□□ -0.1
SKIV2L2-208ENST00000508716 ZEB1P37275 1124 aaPredicted RBP14.43□□□□□ -0.1
SKIV2L2-208ENST00000508716 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
SKIV2L2-208ENST00000508716 TNIKQ9UKE5 1360 aa14.43□□□□□ -0.1
SKIV2L2-208ENST00000508716 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
SKIV2L2-208ENST00000508716 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
SKIV2L2-208ENST00000508716 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
SKIV2L2-208ENST00000508716 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
SKIV2L2-208ENST00000508716 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
SKIV2L2-208ENST00000508716 TPRNQ4KMQ1 711 aa14.35□□□□□ -0.11
SKIV2L2-208ENST00000508716 TTBK1Q5TCY1 1321 aaPredicted RBP14.33□□□□□ -0.12
SKIV2L2-208ENST00000508716 HMGXB3Q12766 1538 aa14.33□□□□□ -0.12
SKIV2L2-208ENST00000508716 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
SKIV2L2-208ENST00000508716 KIF21BO75037 1637 aa14.27□□□□□ -0.12
SKIV2L2-208ENST00000508716 TOP2BQ02880 1626 aa14.27□□□□□ -0.12
SKIV2L2-208ENST00000508716 TIMELESSQ9UNS1 1208 aa14.26□□□□□ -0.13
SKIV2L2-208ENST00000508716 PIAS4Q8N2W9 510 aaPredicted RBP14.24□□□□□ -0.13
SKIV2L2-208ENST00000508716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
SKIV2L2-208ENST00000508716 ARXQ96QS3 562 aa14.23□□□□□ -0.13
SKIV2L2-208ENST00000508716 BIVM-ERCC5R4GMW8 1640 aa14.22□□□□□ -0.13
SKIV2L2-208ENST00000508716 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.13
SKIV2L2-208ENST00000508716 CLIP1P30622 1438 aa14.21□□□□□ -0.13
SKIV2L2-208ENST00000508716 CCER1Q8TC90 406 aaPredicted RBP14.2□□□□□ -0.14
SKIV2L2-208ENST00000508716 CFTRP13569 1480 aa14.19□□□□□ -0.14
SKIV2L2-208ENST00000508716 DNAJC5Q9H3Z4 198 aa14.19□□□□□ -0.14
SKIV2L2-208ENST00000508716 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
SKIV2L2-208ENST00000508716 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
SKIV2L2-208ENST00000508716 CUX1P39880 1505 aa14.16□□□□□ -0.14
SKIV2L2-208ENST00000508716 TULP1O00294 542 aaPredicted RBP14.13□□□□□ -0.15
SKIV2L2-208ENST00000508716 VPS8Q8N3P4 1428 aa14.11□□□□□ -0.15
SKIV2L2-208ENST00000508716 APLP2Q06481 763 aa14.11□□□□□ -0.15
SKIV2L2-208ENST00000508716 KIF27Q86VH2 1401 aa14.1□□□□□ -0.15
SKIV2L2-208ENST00000508716 PRXQ9BXM0 1461 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms