RNA–Protein interactions for RNA: ENST00000506900.1

NDNF-202, Transcript of neuron derived neurotrophic factor, humanhuman

TSL 3

Gene NDNF, Length 917 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDNF-202ENST00000506900 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
NDNF-202ENST00000506900 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
NDNF-202ENST00000506900 NESP48681 1621 aa12.32□□□□□ -0.44
NDNF-202ENST00000506900 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
NDNF-202ENST00000506900 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.44
NDNF-202ENST00000506900 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.45
NDNF-202ENST00000506900 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
NDNF-202ENST00000506900 BIVM-ERCC5R4GMW8 1640 aa12.23□□□□□ -0.45
NDNF-202ENST00000506900 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
NDNF-202ENST00000506900 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
NDNF-202ENST00000506900 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
NDNF-202ENST00000506900 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
NDNF-202ENST00000506900 DNMBPQ6XZF7 1577 aa12.19□□□□□ -0.46
NDNF-202ENST00000506900 THOC2Q8NI27 1593 aaKnown RBP12.19□□□□□ -0.46
NDNF-202ENST00000506900 WRNQ14191 1432 aaPredicted RBP eCLIP12.19□□□□□ -0.46
NDNF-202ENST00000506900 SYNJ1O43426 1573 aa12.18□□□□□ -0.46
NDNF-202ENST00000506900 CUX1P39880 1505 aa12.17□□□□□ -0.46
NDNF-202ENST00000506900 WDR62O43379 1518 aa12.16□□□□□ -0.46
NDNF-202ENST00000506900 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
NDNF-202ENST00000506900 HAX1O00165 279 aa12.16□□□□□ -0.46
NDNF-202ENST00000506900 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
NDNF-202ENST00000506900 FKBP8Q14318 412 aa12.15□□□□□ -0.46
NDNF-202ENST00000506900 URB2Q14146 1524 aaKnown RBP12.15□□□□□ -0.46
NDNF-202ENST00000506900 TOPBP1Q92547 1522 aa12.14□□□□□ -0.47
NDNF-202ENST00000506900 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
NDNF-202ENST00000506900 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
NDNF-202ENST00000506900 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
NDNF-202ENST00000506900 WDR97A6NE52 1622 aa12.07□□□□□ -0.48
NDNF-202ENST00000506900 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
NDNF-202ENST00000506900 FGD5Q6ZNL6 1462 aa12.06□□□□□ -0.48
NDNF-202ENST00000506900 PROM2Q8N271 834 aa12.05□□□□□ -0.48
NDNF-202ENST00000506900 EVX2Q03828 476 aa12.03□□□□□ -0.48
NDNF-202ENST00000506900 TARBP1Q13395 1621 aaKnown RBP12.03□□□□□ -0.48
NDNF-202ENST00000506900 CUX2O14529 1486 aa12.01□□□□□ -0.49
NDNF-202ENST00000506900 ABCA10Q8WWZ4 1543 aa12.01□□□□□ -0.49
NDNF-202ENST00000506900 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
NDNF-202ENST00000506900 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
NDNF-202ENST00000506900 IFT140Q96RY7 1462 aa11.99□□□□□ -0.49
NDNF-202ENST00000506900 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
NDNF-202ENST00000506900 EEA1Q15075 1411 aa11.97□□□□□ -0.49
NDNF-202ENST00000506900 C19orf67A6NJJ6 358 aa11.97□□□□□ -0.49
NDNF-202ENST00000506900 SOGA1O94964 1423 aa11.94□□□□□ -0.5
NDNF-202ENST00000506900 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
NDNF-202ENST00000506900 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
NDNF-202ENST00000506900 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
NDNF-202ENST00000506900 EIF4G3O43432 1585 aaKnown RBP11.9□□□□□ -0.5
NDNF-202ENST00000506900 KIF27Q86VH2 1401 aa11.9□□□□□ -0.5
NDNF-202ENST00000506900 PBRM1Q86U86 1689 aa11.89□□□□□ -0.51
NDNF-202ENST00000506900 ERICH3Q5RHP9 1530 aa11.89□□□□□ -0.51
NDNF-202ENST00000506900 CUL7Q14999 1698 aa11.87□□□□□ -0.51
NDNF-202ENST00000506900 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
NDNF-202ENST00000506900 KIF21BO75037 1637 aa11.85□□□□□ -0.51
NDNF-202ENST00000506900 RUSC2Q8N2Y8 1516 aa11.85□□□□□ -0.51
NDNF-202ENST00000506900 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
NDNF-202ENST00000506900 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
NDNF-202ENST00000506900 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
NDNF-202ENST00000506900 ADAMTS12P58397 1594 aa11.82□□□□□ -0.52
NDNF-202ENST00000506900 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
NDNF-202ENST00000506900 MAGI1Q96QZ7 1491 aaPredicted RBP11.8□□□□□ -0.52
NDNF-202ENST00000506900 IGF1RP08069 1367 aa11.79□□□□□ -0.52
NDNF-202ENST00000506900 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
NDNF-202ENST00000506900 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.52
NDNF-202ENST00000506900 GABBR2O75899 941 aa11.76□□□□□ -0.53
NDNF-202ENST00000506900 FHAD1B1AJZ9 1412 aa11.75□□□□□ -0.53
NDNF-202ENST00000506900 SNAPC4Q5SXM2 1469 aa11.74□□□□□ -0.53
NDNF-202ENST00000506900 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
NDNF-202ENST00000506900 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
NDNF-202ENST00000506900 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
NDNF-202ENST00000506900 SYNJ2O15056 1496 aa11.72□□□□□ -0.53
NDNF-202ENST00000506900 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
NDNF-202ENST00000506900 CARMIL1Q5VZK9 1371 aa11.71□□□□□ -0.53
NDNF-202ENST00000506900 CTTNBP2Q8WZ74 1663 aa11.69□□□□□ -0.54
NDNF-202ENST00000506900 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
NDNF-202ENST00000506900 GRIN2AQ12879 1464 aa11.69□□□□□ -0.54
NDNF-202ENST00000506900 CHD1O14646 1710 aa11.67□□□□□ -0.54
NDNF-202ENST00000506900 NPM1P06748 294 aaKnown RBP eCLIP11.67□□□□□ -0.54
NDNF-202ENST00000506900 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.54
NDNF-202ENST00000506900 NUP160Q12769 1436 aa11.65□□□□□ -0.54
NDNF-202ENST00000506900 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
NDNF-202ENST00000506900 TNIKQ9UKE5 1360 aa11.64□□□□□ -0.55
NDNF-202ENST00000506900 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
NDNF-202ENST00000506900 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
NDNF-202ENST00000506900 MIER1Q8N108 512 aa11.6□□□□□ -0.55
NDNF-202ENST00000506900 IQGAP2Q13576 1575 aa11.59□□□□□ -0.55
NDNF-202ENST00000506900 VASPP50552 380 aaPredicted RBP11.59□□□□□ -0.55
NDNF-202ENST00000506900 CLASP1Q7Z460 1538 aa11.59□□□□□ -0.55
NDNF-202ENST00000506900 KIAA0586Q9BVV6 1533 aa11.59□□□□□ -0.55
NDNF-202ENST00000506900 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
NDNF-202ENST00000506900 CLCN6P51797 869 aa11.58□□□□□ -0.56
NDNF-202ENST00000506900 SHROOM2Q13796 1616 aa11.57□□□□□ -0.56
NDNF-202ENST00000506900 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
NDNF-202ENST00000506900 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
NDNF-202ENST00000506900 SAMD9Q5K651 1589 aa11.56□□□□□ -0.56
NDNF-202ENST00000506900 PHF12Q96QT6 1004 aa11.56□□□□□ -0.56
NDNF-202ENST00000506900 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
NDNF-202ENST00000506900 CHMP7Q8WUX9 453 aaPredicted RBP11.54□□□□□ -0.56
NDNF-202ENST00000506900 CEP162Q5TB80 1403 aa11.52□□□□□ -0.56
NDNF-202ENST00000506900 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
NDNF-202ENST00000506900 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
NDNF-202ENST00000506900 LOC105371045A0A1W2PR82 267 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms