RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 EIF4G3O43432 1585 aaKnown RBP14.2□□□□□ -0.14
RFC1-207ENST00000504554 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
RFC1-207ENST00000504554 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
RFC1-207ENST00000504554 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
RFC1-207ENST00000504554 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
RFC1-207ENST00000504554 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
RFC1-207ENST00000504554 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
RFC1-207ENST00000504554 WDR97A6NE52 1622 aa14.08□□□□□ -0.16
RFC1-207ENST00000504554 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
RFC1-207ENST00000504554 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
RFC1-207ENST00000504554 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
RFC1-207ENST00000504554 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
RFC1-207ENST00000504554 FBLN2P98095 1184 aa14.04□□□□□ -0.16
RFC1-207ENST00000504554 GRIN2BQ13224 1484 aa14.04□□□□□ -0.16
RFC1-207ENST00000504554 GAPVD1Q14C86 1478 aa14.03□□□□□ -0.16
RFC1-207ENST00000504554 CHD1O14646 1710 aa14.01□□□□□ -0.17
RFC1-207ENST00000504554 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
RFC1-207ENST00000504554 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
RFC1-207ENST00000504554 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
RFC1-207ENST00000504554 CHMP7Q8WUX9 453 aaPredicted RBP13.97□□□□□ -0.17
RFC1-207ENST00000504554 TRIM41Q8WV44 630 aa13.97□□□□□ -0.17
RFC1-207ENST00000504554 PBRM1Q86U86 1689 aa13.96□□□□□ -0.17
RFC1-207ENST00000504554 SYNJ2O15056 1496 aa13.96□□□□□ -0.17
RFC1-207ENST00000504554 POLA2Q14181 598 aa13.94□□□□□ -0.18
RFC1-207ENST00000504554 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
RFC1-207ENST00000504554 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
RFC1-207ENST00000504554 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
RFC1-207ENST00000504554 ARHGEF11O15085 1522 aa13.93□□□□□ -0.18
RFC1-207ENST00000504554 POTEHQ6S545 545 aa13.91□□□□□ -0.18
RFC1-207ENST00000504554 CLASP1Q7Z460 1538 aa13.9□□□□□ -0.18
RFC1-207ENST00000504554 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
RFC1-207ENST00000504554 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
RFC1-207ENST00000504554 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
RFC1-207ENST00000504554 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
RFC1-207ENST00000504554 FHAD1B1AJZ9 1412 aa13.86□□□□□ -0.19
RFC1-207ENST00000504554 ZBTB22O15209 634 aa13.85□□□□□ -0.19
RFC1-207ENST00000504554 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
RFC1-207ENST00000504554 IGF1RP08069 1367 aa13.83□□□□□ -0.19
RFC1-207ENST00000504554 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
RFC1-207ENST00000504554 CEP170Q5SW79 1584 aa13.83□□□□□ -0.2
RFC1-207ENST00000504554 NUP160Q12769 1436 aa13.82□□□□□ -0.2
RFC1-207ENST00000504554 KIF27Q86VH2 1401 aa13.8□□□□□ -0.2
RFC1-207ENST00000504554 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
RFC1-207ENST00000504554 ERCC6L2Q5T890 1561 aa13.77□□□□□ -0.21
RFC1-207ENST00000504554 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
RFC1-207ENST00000504554 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.21
RFC1-207ENST00000504554 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
RFC1-207ENST00000504554 JPH4Q96JJ6 628 aa13.69□□□□□ -0.22
RFC1-207ENST00000504554 CUL7Q14999 1698 aa13.69□□□□□ -0.22
RFC1-207ENST00000504554 PRG4Q92954 1404 aaPredicted RBP13.66□□□□□ -0.22
RFC1-207ENST00000504554 KIAA0586Q9BVV6 1533 aa13.64□□□□□ -0.23
RFC1-207ENST00000504554 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
RFC1-207ENST00000504554 RAPGEF2Q9Y4G8 1499 aa13.6□□□□□ -0.23
RFC1-207ENST00000504554 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
RFC1-207ENST00000504554 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
RFC1-207ENST00000504554 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
RFC1-207ENST00000504554 IQGAP2Q13576 1575 aa13.52□□□□□ -0.25
RFC1-207ENST00000504554 DISP1Q96F81 1524 aa13.51□□□□□ -0.25
RFC1-207ENST00000504554 TTBK1Q5TCY1 1321 aaPredicted RBP13.49□□□□□ -0.25
RFC1-207ENST00000504554 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
RFC1-207ENST00000504554 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
RFC1-207ENST00000504554 UGGT2Q9NYU1 1516 aa13.48□□□□□ -0.25
RFC1-207ENST00000504554 TNIKQ9UKE5 1360 aa13.47□□□□□ -0.25
RFC1-207ENST00000504554 PTPRGP23470 1445 aa13.47□□□□□ -0.25
RFC1-207ENST00000504554 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.25
RFC1-207ENST00000504554 CARMIL2Q6F5E8 1435 aa13.46□□□□□ -0.26
RFC1-207ENST00000504554 EEA1Q15075 1411 aa13.43□□□□□ -0.26
RFC1-207ENST00000504554 KIAA0556O60303 1618 aa13.42□□□□□ -0.26
RFC1-207ENST00000504554 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
RFC1-207ENST00000504554 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
RFC1-207ENST00000504554 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
RFC1-207ENST00000504554 UACAQ9BZF9 1416 aa13.38□□□□□ -0.27
RFC1-207ENST00000504554 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
RFC1-207ENST00000504554 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
RFC1-207ENST00000504554 ABCC2Q92887 1545 aa13.36□□□□□ -0.27
RFC1-207ENST00000504554 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
RFC1-207ENST00000504554 ABCC10Q5T3U5 1492 aa13.35□□□□□ -0.27
RFC1-207ENST00000504554 PLB1Q6P1J6 1458 aa13.35□□□□□ -0.27
RFC1-207ENST00000504554 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
RFC1-207ENST00000504554 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
RFC1-207ENST00000504554 KIF13AQ9H1H9 1805 aa13.32□□□□□ -0.28
RFC1-207ENST00000504554 KIF21BO75037 1637 aa13.32□□□□□ -0.28
RFC1-207ENST00000504554 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
RFC1-207ENST00000504554 DIP2BQ9P265 1576 aa13.32□□□□□ -0.28
RFC1-207ENST00000504554 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
RFC1-207ENST00000504554 ASXL2Q76L83 1435 aa13.3□□□□□ -0.28
RFC1-207ENST00000504554 ABCA8O94911 1581 aa13.3□□□□□ -0.28
RFC1-207ENST00000504554 SAMD9Q5K651 1589 aa13.3□□□□□ -0.28
RFC1-207ENST00000504554 FHOD3Q2V2M9 1422 aa13.26□□□□□ -0.29
RFC1-207ENST00000504554 ZCCHC11Q5TAX3 1644 aaKnown RBP13.26□□□□□ -0.29
RFC1-207ENST00000504554 ARID3CA6NKF2 412 aa13.25□□□□□ -0.29
RFC1-207ENST00000504554 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
RFC1-207ENST00000504554 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
RFC1-207ENST00000504554 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
RFC1-207ENST00000504554 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
RFC1-207ENST00000504554 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
RFC1-207ENST00000504554 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
RFC1-207ENST00000504554 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
RFC1-207ENST00000504554 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
RFC1-207ENST00000504554 GLI2P10070 1586 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms