RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 NESP48681 1621 aa15.14■□□□□ 0.01
KDM3B-202ENST00000504095 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
KDM3B-202ENST00000504095 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
KDM3B-202ENST00000504095 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
KDM3B-202ENST00000504095 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
KDM3B-202ENST00000504095 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
KDM3B-202ENST00000504095 CFTRP13569 1480 aa15.02■□□□□ -0
KDM3B-202ENST00000504095 EVX2Q03828 476 aa15.02■□□□□ -0
KDM3B-202ENST00000504095 KIF21AQ7Z4S6 1674 aa15.01□□□□□ -0.01
KDM3B-202ENST00000504095 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
KDM3B-202ENST00000504095 PRDM2Q13029 1718 aa15□□□□□ -0.01
KDM3B-202ENST00000504095 ERCC6Q03468 1493 aa15□□□□□ -0.01
KDM3B-202ENST00000504095 PDS5BQ9NTI5 1447 aa14.97□□□□□ -0.01
KDM3B-202ENST00000504095 FANCD2Q9BXW9 1451 aa14.91□□□□□ -0.02
KDM3B-202ENST00000504095 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
KDM3B-202ENST00000504095 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
KDM3B-202ENST00000504095 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
KDM3B-202ENST00000504095 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
KDM3B-202ENST00000504095 STAG3Q9UJ98 1225 aa14.82□□□□□ -0.04
KDM3B-202ENST00000504095 FARP1Q9Y4F1 1045 aaPredicted RBP14.8□□□□□ -0.04
KDM3B-202ENST00000504095 CUX2O14529 1486 aa14.8□□□□□ -0.04
KDM3B-202ENST00000504095 WDR62O43379 1518 aa14.8□□□□□ -0.04
KDM3B-202ENST00000504095 URB2Q14146 1524 aaKnown RBP14.77□□□□□ -0.04
KDM3B-202ENST00000504095 CREBZFQ9NS37 354 aa14.73□□□□□ -0.05
KDM3B-202ENST00000504095 CD44P16070 742 aaKnown RBP14.72□□□□□ -0.05
KDM3B-202ENST00000504095 DNMBPQ6XZF7 1577 aa14.7□□□□□ -0.06
KDM3B-202ENST00000504095 TOPBP1Q92547 1522 aa14.7□□□□□ -0.06
KDM3B-202ENST00000504095 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
KDM3B-202ENST00000504095 GABBR2O75899 941 aa14.67□□□□□ -0.06
KDM3B-202ENST00000504095 CUX1P39880 1505 aa14.65□□□□□ -0.06
KDM3B-202ENST00000504095 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
KDM3B-202ENST00000504095 SYNJ1O43426 1573 aa14.58□□□□□ -0.08
KDM3B-202ENST00000504095 BIVM-ERCC5R4GMW8 1640 aa14.58□□□□□ -0.08
KDM3B-202ENST00000504095 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
KDM3B-202ENST00000504095 PROM2Q8N271 834 aa14.57□□□□□ -0.08
KDM3B-202ENST00000504095 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
KDM3B-202ENST00000504095 TOP2BQ02880 1626 aa14.56□□□□□ -0.08
KDM3B-202ENST00000504095 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
KDM3B-202ENST00000504095 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
KDM3B-202ENST00000504095 ZRANB1Q9UGI0 708 aa14.54□□□□□ -0.08
KDM3B-202ENST00000504095 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
KDM3B-202ENST00000504095 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
KDM3B-202ENST00000504095 SOGA1O94964 1423 aa14.5□□□□□ -0.09
KDM3B-202ENST00000504095 WDR97A6NE52 1622 aa14.49□□□□□ -0.09
KDM3B-202ENST00000504095 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
KDM3B-202ENST00000504095 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.09
KDM3B-202ENST00000504095 MNX1P50219 401 aaPredicted RBP14.46□□□□□ -0.09
KDM3B-202ENST00000504095 ZNF579Q8NAF0 562 aaKnown RBP14.44□□□□□ -0.1
KDM3B-202ENST00000504095 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
KDM3B-202ENST00000504095 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
KDM3B-202ENST00000504095 AQRO60306 1485 aaKnown RBP eCLIP14.43□□□□□ -0.1
KDM3B-202ENST00000504095 FKBP8Q14318 412 aa14.42□□□□□ -0.1
KDM3B-202ENST00000504095 TDRD9Q8NDG6 1382 aaKnown RBP14.41□□□□□ -0.1
KDM3B-202ENST00000504095 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
KDM3B-202ENST00000504095 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
KDM3B-202ENST00000504095 POTEIP0CG38 1075 aa14.36□□□□□ -0.11
KDM3B-202ENST00000504095 PHF12Q96QT6 1004 aa14.36□□□□□ -0.11
KDM3B-202ENST00000504095 CLCN6P51797 869 aa14.35□□□□□ -0.11
KDM3B-202ENST00000504095 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
KDM3B-202ENST00000504095 MIER1Q8N108 512 aa14.34□□□□□ -0.11
KDM3B-202ENST00000504095 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
KDM3B-202ENST00000504095 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
KDM3B-202ENST00000504095 GALR2O43603 387 aaPredicted RBP14.32□□□□□ -0.12
KDM3B-202ENST00000504095 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
KDM3B-202ENST00000504095 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
KDM3B-202ENST00000504095 CHD1O14646 1710 aa14.29□□□□□ -0.12
KDM3B-202ENST00000504095 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
KDM3B-202ENST00000504095 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
KDM3B-202ENST00000504095 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
KDM3B-202ENST00000504095 PLCD3Q8N3E9 789 aa14.26□□□□□ -0.13
KDM3B-202ENST00000504095 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
KDM3B-202ENST00000504095 KIF27Q86VH2 1401 aa14.25□□□□□ -0.13
KDM3B-202ENST00000504095 LHX8Q68G74 356 aa14.24□□□□□ -0.13
KDM3B-202ENST00000504095 ADAMTS12P58397 1594 aa14.24□□□□□ -0.13
KDM3B-202ENST00000504095 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
KDM3B-202ENST00000504095 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
KDM3B-202ENST00000504095 IGF1RP08069 1367 aa14.19□□□□□ -0.14
KDM3B-202ENST00000504095 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
KDM3B-202ENST00000504095 CUL7Q14999 1698 aa14.17□□□□□ -0.14
KDM3B-202ENST00000504095 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
KDM3B-202ENST00000504095 DNAJC5Q9H3Z4 198 aa14.17□□□□□ -0.14
KDM3B-202ENST00000504095 MS4A3Q96HJ5 214 aa14.16□□□□□ -0.14
KDM3B-202ENST00000504095 GRIN2AQ12879 1464 aa14.15□□□□□ -0.14
KDM3B-202ENST00000504095 RASEFQ8IZ41 740 aa14.13□□□□□ -0.15
KDM3B-202ENST00000504095 CCDC61Q9Y6R9 512 aa14.12□□□□□ -0.15
KDM3B-202ENST00000504095 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
KDM3B-202ENST00000504095 CARMIL1Q5VZK9 1371 aa14.1□□□□□ -0.15
KDM3B-202ENST00000504095 CEP170Q5SW79 1584 aa14.1□□□□□ -0.15
KDM3B-202ENST00000504095 NUP160Q12769 1436 aa14.08□□□□□ -0.15
KDM3B-202ENST00000504095 ZBTB47Q9UFB7 747 aaPredicted RBP14.06□□□□□ -0.16
KDM3B-202ENST00000504095 EEA1Q15075 1411 aa14.06□□□□□ -0.16
KDM3B-202ENST00000504095 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
KDM3B-202ENST00000504095 KIF12Q96FN5 646 aa14.03□□□□□ -0.16
KDM3B-202ENST00000504095 PRXQ9BXM0 1461 aa14.03□□□□□ -0.16
KDM3B-202ENST00000504095 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
KDM3B-202ENST00000504095 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.17
KDM3B-202ENST00000504095 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
KDM3B-202ENST00000504095 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
KDM3B-202ENST00000504095 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
KDM3B-202ENST00000504095 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms