RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
KDM3B-202ENST00000504095 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
KDM3B-202ENST00000504095 SENP3Q9H4L4 574 aaPredicted RBP24.36■■□□□ 1.49
KDM3B-202ENST00000504095 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
KDM3B-202ENST00000504095 FOXD1Q16676 465 aa22.73■■□□□ 1.23
KDM3B-202ENST00000504095 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
KDM3B-202ENST00000504095 PPP6R1Q9UPN7 881 aa21.35■■□□□ 1.01
KDM3B-202ENST00000504095 ADRA2BP18089 450 aa21.32■■□□□ 1
KDM3B-202ENST00000504095 PIAS4Q8N2W9 510 aaPredicted RBP21.31■■□□□ 1
KDM3B-202ENST00000504095 MSH5O43196 834 aa21.19■□□□□ 0.98
KDM3B-202ENST00000504095 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
KDM3B-202ENST00000504095 NISCHQ9Y2I1 1504 aa20.25■□□□□ 0.83
KDM3B-202ENST00000504095 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
KDM3B-202ENST00000504095 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
KDM3B-202ENST00000504095 DMRT2Q9Y5R5 561 aa19.33■□□□□ 0.68
KDM3B-202ENST00000504095 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
KDM3B-202ENST00000504095 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
KDM3B-202ENST00000504095 DCAF8L1A6NGE4 600 aa18.68■□□□□ 0.58
KDM3B-202ENST00000504095 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
KDM3B-202ENST00000504095 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
KDM3B-202ENST00000504095 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
KDM3B-202ENST00000504095 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
KDM3B-202ENST00000504095 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
KDM3B-202ENST00000504095 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
KDM3B-202ENST00000504095 KCNA4P22459 653 aa17.98■□□□□ 0.47
KDM3B-202ENST00000504095 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
KDM3B-202ENST00000504095 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
KDM3B-202ENST00000504095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.85■□□□□ 0.45
KDM3B-202ENST00000504095 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
KDM3B-202ENST00000504095 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
KDM3B-202ENST00000504095 ABCC9O60706 1549 aa17.43■□□□□ 0.38
KDM3B-202ENST00000504095 SLC4A2P04920 1241 aa17.34■□□□□ 0.37
KDM3B-202ENST00000504095 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
KDM3B-202ENST00000504095 CAPN15O75808 1086 aa17.2■□□□□ 0.34
KDM3B-202ENST00000504095 DSG3P32926 999 aa17■□□□□ 0.31
KDM3B-202ENST00000504095 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
KDM3B-202ENST00000504095 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
KDM3B-202ENST00000504095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.94■□□□□ 0.3
KDM3B-202ENST00000504095 APLP2Q06481 763 aa16.94■□□□□ 0.3
KDM3B-202ENST00000504095 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
KDM3B-202ENST00000504095 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
KDM3B-202ENST00000504095 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
KDM3B-202ENST00000504095 ABCB7O75027 752 aa16.85■□□□□ 0.29
KDM3B-202ENST00000504095 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
KDM3B-202ENST00000504095 NACADO15069 1562 aa16.84■□□□□ 0.29
KDM3B-202ENST00000504095 RB1CC1Q8TDY2 1594 aa16.82■□□□□ 0.28
KDM3B-202ENST00000504095 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
KDM3B-202ENST00000504095 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
KDM3B-202ENST00000504095 MYO15BQ96JP2 1530 aa16.77■□□□□ 0.28
KDM3B-202ENST00000504095 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
KDM3B-202ENST00000504095 FOXD4L1Q9NU39 408 aa16.7■□□□□ 0.26
KDM3B-202ENST00000504095 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
KDM3B-202ENST00000504095 ZBTB22O15209 634 aa16.52■□□□□ 0.24
KDM3B-202ENST00000504095 POLA2Q14181 598 aa16.49■□□□□ 0.23
KDM3B-202ENST00000504095 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
KDM3B-202ENST00000504095 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
KDM3B-202ENST00000504095 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
KDM3B-202ENST00000504095 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
KDM3B-202ENST00000504095 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
KDM3B-202ENST00000504095 POTEHQ6S545 545 aa16.14■□□□□ 0.17
KDM3B-202ENST00000504095 SHROOM4Q9ULL8 1493 aa16.13■□□□□ 0.17
KDM3B-202ENST00000504095 ATXN8OSP0DMR3 200 aa16.11■□□□□ 0.17
KDM3B-202ENST00000504095 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
KDM3B-202ENST00000504095 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
KDM3B-202ENST00000504095 EIF4G1Q04637 1599 aaKnown RBP15.88■□□□□ 0.13
KDM3B-202ENST00000504095 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
KDM3B-202ENST00000504095 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
KDM3B-202ENST00000504095 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
KDM3B-202ENST00000504095 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
KDM3B-202ENST00000504095 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
KDM3B-202ENST00000504095 FBLN2P98095 1184 aa15.79■□□□□ 0.12
KDM3B-202ENST00000504095 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
KDM3B-202ENST00000504095 REM2Q8IYK8 340 aaPredicted RBP15.73■□□□□ 0.11
KDM3B-202ENST00000504095 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
KDM3B-202ENST00000504095 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
KDM3B-202ENST00000504095 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
KDM3B-202ENST00000504095 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
KDM3B-202ENST00000504095 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
KDM3B-202ENST00000504095 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
KDM3B-202ENST00000504095 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
KDM3B-202ENST00000504095 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
KDM3B-202ENST00000504095 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
KDM3B-202ENST00000504095 SMARCA2P51531 1590 aa15.55■□□□□ 0.08
KDM3B-202ENST00000504095 PEG3Q9GZU2 1588 aa15.54■□□□□ 0.08
KDM3B-202ENST00000504095 NCAPD3P42695 1498 aa15.52■□□□□ 0.07
KDM3B-202ENST00000504095 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
KDM3B-202ENST00000504095 WIZO95785 1651 aa15.49■□□□□ 0.07
KDM3B-202ENST00000504095 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
KDM3B-202ENST00000504095 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
KDM3B-202ENST00000504095 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
KDM3B-202ENST00000504095 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
KDM3B-202ENST00000504095 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
KDM3B-202ENST00000504095 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
KDM3B-202ENST00000504095 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.052e-6■■□□□ 14.1
KDM3B-202ENST00000504095 SPDYE1Q8NFV5 336 aaPredicted RBP15.34■□□□□ 0.05
KDM3B-202ENST00000504095 TOP2AP11388 1531 aaKnown RBP15.3■□□□□ 0.04
KDM3B-202ENST00000504095 HAX1O00165 279 aa15.22■□□□□ 0.03
KDM3B-202ENST00000504095 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
KDM3B-202ENST00000504095 SP7Q8TDD2 431 aaPredicted RBP15.17■□□□□ 0.02
KDM3B-202ENST00000504095 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms