RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 HOMEZQ8IX15 550 aa9.92□□□□□ -0.82
SH3TC2-204ENST00000504091 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
SH3TC2-204ENST00000504091 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
SH3TC2-204ENST00000504091 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
SH3TC2-204ENST00000504091 UBTFP17480 764 aaKnown RBP9.88□□□□□ -0.83
SH3TC2-204ENST00000504091 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
SH3TC2-204ENST00000504091 MYT1LQ9UL68 1186 aa9.88□□□□□ -0.83
SH3TC2-204ENST00000504091 RSF1Q96T23 1441 aaPredicted RBP9.87□□□□□ -0.83
SH3TC2-204ENST00000504091 ABCC8Q09428 1581 aa9.87□□□□□ -0.83
SH3TC2-204ENST00000504091 KDM2AQ9Y2K7 1162 aa9.86□□□□□ -0.83
SH3TC2-204ENST00000504091 CEP164Q9UPV0 1460 aa9.86□□□□□ -0.83
SH3TC2-204ENST00000504091 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
SH3TC2-204ENST00000504091 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
SH3TC2-204ENST00000504091 PPP4R3CPQ6ZMV5 832 aa9.84□□□□□ -0.83
SH3TC2-204ENST00000504091 NESP48681 1621 aa9.84□□□□□ -0.83
SH3TC2-204ENST00000504091 CDK11AQ9UQ88 783 aaPredicted RBP9.84□□□□□ -0.83
SH3TC2-204ENST00000504091 IFT140Q96RY7 1462 aa9.82□□□□□ -0.84
SH3TC2-204ENST00000504091 RTL5Q5HYW3 569 aaPredicted RBP9.81□□□□□ -0.84
SH3TC2-204ENST00000504091 ITGAEP38570 1179 aa9.81□□□□□ -0.84
SH3TC2-204ENST00000504091 CFTRP13569 1480 aa9.81□□□□□ -0.84
SH3TC2-204ENST00000504091 C14orf37Q86TY3 774 aa9.78□□□□□ -0.84
SH3TC2-204ENST00000504091 SENP3Q9H4L4 574 aaPredicted RBP9.76□□□□□ -0.85
SH3TC2-204ENST00000504091 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
SH3TC2-204ENST00000504091 DEKP35659 375 aaKnown RBP9.75□□□□□ -0.85
SH3TC2-204ENST00000504091 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
SH3TC2-204ENST00000504091 NBR1Q14596 966 aa9.73□□□□□ -0.85
SH3TC2-204ENST00000504091 FANCD2Q9BXW9 1451 aa9.73□□□□□ -0.85
SH3TC2-204ENST00000504091 TOP2AP11388 1531 aaKnown RBP9.71□□□□□ -0.86
SH3TC2-204ENST00000504091 CLASP1Q7Z460 1538 aa9.7□□□□□ -0.86
SH3TC2-204ENST00000504091 EIF5BO60841 1220 aaKnown RBP9.68□□□□□ -0.86
SH3TC2-204ENST00000504091 TRIM52Q96A61 297 aa9.68□□□□□ -0.86
SH3TC2-204ENST00000504091 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
SH3TC2-204ENST00000504091 DNMBPQ6XZF7 1577 aa9.67□□□□□ -0.86
SH3TC2-204ENST00000504091 URB2Q14146 1524 aaKnown RBP9.67□□□□□ -0.86
SH3TC2-204ENST00000504091 MROH2BQ7Z745 1585 aa9.66□□□□□ -0.86
SH3TC2-204ENST00000504091 TMEM132AQ24JP5 1023 aa9.66□□□□□ -0.86
SH3TC2-204ENST00000504091 CFAP44Q96MT7 982 aa9.66□□□□□ -0.86
SH3TC2-204ENST00000504091 ANP32CO43423 234 aa9.65□□□□□ -0.86
SH3TC2-204ENST00000504091 EIF4G3O43432 1585 aaKnown RBP9.65□□□□□ -0.86
SH3TC2-204ENST00000504091 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.86
SH3TC2-204ENST00000504091 CHD1O14646 1710 aa9.64□□□□□ -0.87
SH3TC2-204ENST00000504091 TARBP1Q13395 1621 aaKnown RBP9.64□□□□□ -0.87
SH3TC2-204ENST00000504091 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
SH3TC2-204ENST00000504091 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
SH3TC2-204ENST00000504091 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
SH3TC2-204ENST00000504091 ANP32AP39687 249 aaKnown RBP9.61□□□□□ -0.87
SH3TC2-204ENST00000504091 IRX6P78412 446 aaPredicted RBP9.61□□□□□ -0.87
SH3TC2-204ENST00000504091 ERICH6BQ5W0A0 696 aa9.61□□□□□ -0.87
SH3TC2-204ENST00000504091 FOXD4L1Q9NU39 408 aa9.61□□□□□ -0.87
SH3TC2-204ENST00000504091 FANCIQ9NVI1 1328 aa9.61□□□□□ -0.87
SH3TC2-204ENST00000504091 ARAP1Q96P48 1450 aa9.61□□□□□ -0.87
SH3TC2-204ENST00000504091 CEP162Q5TB80 1403 aa9.6□□□□□ -0.87
SH3TC2-204ENST00000504091 MAGI1Q96QZ7 1491 aaPredicted RBP9.59□□□□□ -0.87
SH3TC2-204ENST00000504091 MSH5O43196 834 aa9.59□□□□□ -0.87
SH3TC2-204ENST00000504091 KCNH8Q96L42 1107 aa9.59□□□□□ -0.87
SH3TC2-204ENST00000504091 NOP58Q9Y2X3 529 aaKnown RBP9.58□□□□□ -0.88
SH3TC2-204ENST00000504091 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.58□□□□□ -0.88
SH3TC2-204ENST00000504091 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
SH3TC2-204ENST00000504091 ZBTB47Q9UFB7 747 aaPredicted RBP9.56□□□□□ -0.88
SH3TC2-204ENST00000504091 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
SH3TC2-204ENST00000504091 TOPBP1Q92547 1522 aa9.55□□□□□ -0.88
SH3TC2-204ENST00000504091 HNRNPUQ00839 825 aaKnown RBP eCLIP9.55□□□□□ -0.88
SH3TC2-204ENST00000504091 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
SH3TC2-204ENST00000504091 SHROOM2Q13796 1616 aa9.52□□□□□ -0.88
SH3TC2-204ENST00000504091 WRNQ14191 1432 aaPredicted RBP eCLIP9.52□□□□□ -0.89
SH3TC2-204ENST00000504091 ARID3AQ99856 593 aa9.52□□□□□ -0.89
SH3TC2-204ENST00000504091 WIZO95785 1651 aa9.51□□□□□ -0.89
SH3TC2-204ENST00000504091 TNIKQ9UKE5 1360 aa9.5□□□□□ -0.89
SH3TC2-204ENST00000504091 GLIPR1L2Q4G1C9 344 aa9.49□□□□□ -0.89
SH3TC2-204ENST00000504091 PPP4R2Q9NY27 417 aa9.49□□□□□ -0.89
SH3TC2-204ENST00000504091 PLEKHG5O94827 1062 aa9.46□□□□□ -0.89
SH3TC2-204ENST00000504091 HIRIP3Q9BW71 556 aaPredicted RBP9.46□□□□□ -0.9
SH3TC2-204ENST00000504091 PBRM1Q86U86 1689 aa9.45□□□□□ -0.9
SH3TC2-204ENST00000504091 SYNJ2O15056 1496 aa9.45□□□□□ -0.9
SH3TC2-204ENST00000504091 B4GALNT3Q6L9W6 998 aa9.45□□□□□ -0.9
SH3TC2-204ENST00000504091 CCER2I3L3R5 266 aa9.44□□□□□ -0.9
SH3TC2-204ENST00000504091 ERCC6L2Q5T890 1561 aa9.44□□□□□ -0.9
SH3TC2-204ENST00000504091 IL27Q8NEV9 243 aa9.44□□□□□ -0.9
SH3TC2-204ENST00000504091 MAPKBP1O60336 1514 aa9.43□□□□□ -0.9
SH3TC2-204ENST00000504091 UBE2Q2Q8WVN8 375 aa9.43□□□□□ -0.9
SH3TC2-204ENST00000504091 NEFMP07197 916 aa9.43□□□□□ -0.9
SH3TC2-204ENST00000504091 GRIN2BQ13224 1484 aa9.41□□□□□ -0.9
SH3TC2-204ENST00000504091 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
SH3TC2-204ENST00000504091 KIF13AQ9H1H9 1805 aa9.41□□□□□ -0.9
SH3TC2-204ENST00000504091 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.9
SH3TC2-204ENST00000504091 LAS1LQ9Y4W2 734 aaKnown RBP9.4□□□□□ -0.91
SH3TC2-204ENST00000504091 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
SH3TC2-204ENST00000504091 CLIP1P30622 1438 aa9.39□□□□□ -0.91
SH3TC2-204ENST00000504091 DHX57Q6P158 1386 aaKnown RBP9.39□□□□□ -0.91
SH3TC2-204ENST00000504091 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
SH3TC2-204ENST00000504091 PAK3O75914 559 aaPredicted RBP9.37□□□□□ -0.91
SH3TC2-204ENST00000504091 GOLGA3Q08378 1498 aa9.37□□□□□ -0.91
SH3TC2-204ENST00000504091 POLA1P09884 1462 aaPredicted RBP9.37□□□□□ -0.91
SH3TC2-204ENST00000504091 PPM1GO15355 546 aaPredicted RBP9.36□□□□□ -0.91
SH3TC2-204ENST00000504091 CNGB1Q14028 1251 aaPredicted RBP9.36□□□□□ -0.91
SH3TC2-204ENST00000504091 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
SH3TC2-204ENST00000504091 GLI2P10070 1586 aa9.35□□□□□ -0.91
SH3TC2-204ENST00000504091 EEA1Q15075 1411 aa9.35□□□□□ -0.91
SH3TC2-204ENST00000504091 NUP160Q12769 1436 aa9.35□□□□□ -0.91
SH3TC2-204ENST00000504091 FAM50AQ14320 339 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms