RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 NISCHQ9Y2I1 1504 aa12.86□□□□□ -0.35
SH3TC2-204ENST00000504091 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
SH3TC2-204ENST00000504091 EHMT2Q96KQ7 1210 aa12.38□□□□□ -0.43
SH3TC2-204ENST00000504091 AEBP2Q6ZN18 517 aaPredicted RBP12.34□□□□□ -0.43
SH3TC2-204ENST00000504091 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
SH3TC2-204ENST00000504091 CCDC180Q9P1Z9 1646 aa12.21□□□□□ -0.45
SH3TC2-204ENST00000504091 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
SH3TC2-204ENST00000504091 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
SH3TC2-204ENST00000504091 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
SH3TC2-204ENST00000504091 ABCC9O60706 1549 aa11.61□□□□□ -0.55
SH3TC2-204ENST00000504091 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
SH3TC2-204ENST00000504091 RB1CC1Q8TDY2 1594 aa11.53□□□□□ -0.56
SH3TC2-204ENST00000504091 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
SH3TC2-204ENST00000504091 MYO15BQ96JP2 1530 aa11.49□□□□□ -0.57
SH3TC2-204ENST00000504091 HRCP23327 699 aa11.47□□□□□ -0.57
SH3TC2-204ENST00000504091 NACADO15069 1562 aa11.46□□□□□ -0.57
SH3TC2-204ENST00000504091 MYT1Q01538 1121 aa11.35□□□□□ -0.59
SH3TC2-204ENST00000504091 PCGF6Q9BYE7 350 aa11.33□□□□□ -0.6
SH3TC2-204ENST00000504091 KCNA4P22459 653 aa11.27□□□□□ -0.6
SH3TC2-204ENST00000504091 PPARGC1BQ86YN6 1023 aaKnown RBP11.23□□□□□ -0.61
SH3TC2-204ENST00000504091 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
SH3TC2-204ENST00000504091 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
SH3TC2-204ENST00000504091 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
SH3TC2-204ENST00000504091 PRKCSHP14314 528 aaPredicted RBP11.1□□□□□ -0.63
SH3TC2-204ENST00000504091 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
SH3TC2-204ENST00000504091 BICRAQ9NZM4 1560 aa11.04□□□□□ -0.64
SH3TC2-204ENST00000504091 DNAJC5BQ9UF47 199 aa11.01□□□□□ -0.65
SH3TC2-204ENST00000504091 ZEB1P37275 1124 aaPredicted RBP10.94□□□□□ -0.66
SH3TC2-204ENST00000504091 SCAF1Q9H7N4 1312 aaKnown RBP10.9□□□□□ -0.66
SH3TC2-204ENST00000504091 CENPBP07199 599 aaPredicted RBP10.85□□□□□ -0.67
SH3TC2-204ENST00000504091 CUX2O14529 1486 aa10.85□□□□□ -0.67
SH3TC2-204ENST00000504091 TRIM26Q12899 539 aaPredicted RBP10.83□□□□□ -0.68
SH3TC2-204ENST00000504091 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
SH3TC2-204ENST00000504091 DNAJC5Q9H3Z4 198 aa10.8□□□□□ -0.68
SH3TC2-204ENST00000504091 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
SH3TC2-204ENST00000504091 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.68
SH3TC2-204ENST00000504091 ADRA2BP18089 450 aa10.77□□□□□ -0.69
SH3TC2-204ENST00000504091 CECR2Q9BXF3 1484 aa10.75□□□□□ -0.69
SH3TC2-204ENST00000504091 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
SH3TC2-204ENST00000504091 SLC4A1APQ9BWU0 796 aaKnown RBP10.71□□□□□ -0.69
SH3TC2-204ENST00000504091 ACIN1Q9UKV3 1341 aaKnown RBP10.71□□□□□ -0.69
SH3TC2-204ENST00000504091 NCBP3Q53F19 620 aaKnown RBP10.69□□□□□ -0.7
SH3TC2-204ENST00000504091 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
SH3TC2-204ENST00000504091 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
SH3TC2-204ENST00000504091 NEUROD1Q13562 356 aa10.61□□□□□ -0.71
SH3TC2-204ENST00000504091 DAXXQ9UER7 740 aaPredicted RBP10.61□□□□□ -0.71
SH3TC2-204ENST00000504091 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
SH3TC2-204ENST00000504091 DCAF8L2P0C7V8 631 aa10.57□□□□□ -0.72
SH3TC2-204ENST00000504091 CCER1Q8TC90 406 aaPredicted RBP10.56□□□□□ -0.72
SH3TC2-204ENST00000504091 YTHDC1Q96MU7 727 aaKnown RBP10.56□□□□□ -0.72
SH3TC2-204ENST00000504091 TIMELESSQ9UNS1 1208 aa10.54□□□□□ -0.72
SH3TC2-204ENST00000504091 DIEXFQ68CQ4 756 aaKnown RBP10.52□□□□□ -0.72
SH3TC2-204ENST00000504091 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
SH3TC2-204ENST00000504091 HMGXB3Q12766 1538 aa10.49□□□□□ -0.73
SH3TC2-204ENST00000504091 SMARCA2P51531 1590 aa10.45□□□□□ -0.74
SH3TC2-204ENST00000504091 ZBTB22O15209 634 aa10.44□□□□□ -0.74
SH3TC2-204ENST00000504091 NCAPD3P42695 1498 aa10.43□□□□□ -0.74
SH3TC2-204ENST00000504091 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
SH3TC2-204ENST00000504091 TPRNQ4KMQ1 711 aa10.42□□□□□ -0.74
SH3TC2-204ENST00000504091 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
SH3TC2-204ENST00000504091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.39□□□□□ -0.75
SH3TC2-204ENST00000504091 TAOK2Q9UL54 1235 aa10.38□□□□□ -0.75
SH3TC2-204ENST00000504091 PEG3Q9GZU2 1588 aa10.37□□□□□ -0.75
SH3TC2-204ENST00000504091 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
SH3TC2-204ENST00000504091 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
SH3TC2-204ENST00000504091 BCL11AQ9H165 835 aa10.36□□□□□ -0.75
SH3TC2-204ENST00000504091 SCRIBQ14160 1630 aa10.34□□□□□ -0.75
SH3TC2-204ENST00000504091 TRIM41Q8WV44 630 aa10.31□□□□□ -0.76
SH3TC2-204ENST00000504091 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
SH3TC2-204ENST00000504091 ANP32EQ9BTT0 268 aa10.26□□□□□ -0.77
SH3TC2-204ENST00000504091 ZNF316A6NFI3 1004 aaPredicted RBP10.22□□□□□ -0.77
SH3TC2-204ENST00000504091 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
SH3TC2-204ENST00000504091 ERCC6Q03468 1493 aa10.21□□□□□ -0.78
SH3TC2-204ENST00000504091 WDR62O43379 1518 aa10.19□□□□□ -0.78
SH3TC2-204ENST00000504091 FKBP8Q14318 412 aa10.19□□□□□ -0.78
SH3TC2-204ENST00000504091 SMARCA4P51532 1647 aa10.16□□□□□ -0.78
SH3TC2-204ENST00000504091 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
SH3TC2-204ENST00000504091 ATAD2BQ9ULI0 1458 aa10.16□□□□□ -0.78
SH3TC2-204ENST00000504091 BCANQ96GW7 911 aa10.14□□□□□ -0.79
SH3TC2-204ENST00000504091 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
SH3TC2-204ENST00000504091 CLSPNQ9HAW4 1339 aa10.12□□□□□ -0.79
SH3TC2-204ENST00000504091 MIER1Q8N108 512 aa10.12□□□□□ -0.79
SH3TC2-204ENST00000504091 BAZ1AQ9NRL2 1556 aaPredicted RBP10.11□□□□□ -0.79
SH3TC2-204ENST00000504091 NPM3O75607 178 aaKnown RBP10.11□□□□□ -0.79
SH3TC2-204ENST00000504091 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
SH3TC2-204ENST00000504091 NEFLP07196 543 aa10.1□□□□□ -0.79
SH3TC2-204ENST00000504091 PRDM2Q13029 1718 aa10.08□□□□□ -0.8
SH3TC2-204ENST00000504091 MRC2Q9UBG0 1479 aa10.08□□□□□ -0.8
SH3TC2-204ENST00000504091 PODXL2Q9NZ53 605 aa10.08□□□□□ -0.8
SH3TC2-204ENST00000504091 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
SH3TC2-204ENST00000504091 KIF21AQ7Z4S6 1674 aa10.06□□□□□ -0.8
SH3TC2-204ENST00000504091 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
SH3TC2-204ENST00000504091 SUPT16HQ9Y5B9 1047 aaKnown RBP10.03□□□□□ -0.8
SH3TC2-204ENST00000504091 ARXQ96QS3 562 aa10.02□□□□□ -0.81
SH3TC2-204ENST00000504091 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
SH3TC2-204ENST00000504091 BAZ1BQ9UIG0 1483 aaKnown RBP10□□□□□ -0.81
SH3TC2-204ENST00000504091 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
SH3TC2-204ENST00000504091 FBLN2P98095 1184 aa9.96□□□□□ -0.82
SH3TC2-204ENST00000504091 RANGAP1P46060 587 aaPredicted RBP9.95□□□□□ -0.82
SH3TC2-204ENST00000504091 APLP2Q06481 763 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms