RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
SDHA-203ENST00000503674 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
SDHA-203ENST00000503674 RAD54L2Q9Y4B4 1467 aa20.08■□□□□ 0.81
SDHA-203ENST00000503674 ARAP1Q96P48 1450 aa20.07■□□□□ 0.8
SDHA-203ENST00000503674 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
SDHA-203ENST00000503674 CUL7Q14999 1698 aa20.06■□□□□ 0.8
SDHA-203ENST00000503674 DHX57Q6P158 1386 aaKnown RBP20.05■□□□□ 0.8
SDHA-203ENST00000503674 BCANQ96GW7 911 aa20.03■□□□□ 0.8
SDHA-203ENST00000503674 RBM19Q9Y4C8 960 aaKnown RBP20.03■□□□□ 0.8
SDHA-203ENST00000503674 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
SDHA-203ENST00000503674 KCNH8Q96L42 1107 aa19.99■□□□□ 0.79
SDHA-203ENST00000503674 ARHGAP35Q9NRY4 1499 aa19.99■□□□□ 0.79
SDHA-203ENST00000503674 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
SDHA-203ENST00000503674 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
SDHA-203ENST00000503674 FKBP8Q14318 412 aa19.97■□□□□ 0.79
SDHA-203ENST00000503674 APLP2Q06481 763 aa19.95■□□□□ 0.78
SDHA-203ENST00000503674 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
SDHA-203ENST00000503674 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
SDHA-203ENST00000503674 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
SDHA-203ENST00000503674 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.77
SDHA-203ENST00000503674 WDR62O43379 1518 aa19.88■□□□□ 0.77
SDHA-203ENST00000503674 MSH5O43196 834 aa19.88■□□□□ 0.77
SDHA-203ENST00000503674 EFCAB5A4FU69 1503 aa19.83■□□□□ 0.77
SDHA-203ENST00000503674 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.76
SDHA-203ENST00000503674 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
SDHA-203ENST00000503674 MAP3K1Q13233 1512 aa19.8■□□□□ 0.76
SDHA-203ENST00000503674 NEFLP07196 543 aa19.77■□□□□ 0.76
SDHA-203ENST00000503674 PRKCSHP14314 528 aaPredicted RBP19.77■□□□□ 0.76
SDHA-203ENST00000503674 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
SDHA-203ENST00000503674 ITGAEP38570 1179 aa19.76■□□□□ 0.75
SDHA-203ENST00000503674 TIAM1Q13009 1591 aa19.75■□□□□ 0.75
SDHA-203ENST00000503674 CFAP43Q8NDM7 1665 aa19.73■□□□□ 0.75
SDHA-203ENST00000503674 FANCIQ9NVI1 1328 aa19.72■□□□□ 0.75
SDHA-203ENST00000503674 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
SDHA-203ENST00000503674 PCF11O94913 1555 aaKnown RBP19.72■□□□□ 0.75
SDHA-203ENST00000503674 KANK4Q5T7N3 995 aaPredicted RBP19.71■□□□□ 0.75
SDHA-203ENST00000503674 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
SDHA-203ENST00000503674 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
SDHA-203ENST00000503674 AQRO60306 1485 aaKnown RBP eCLIP19.68■□□□□ 0.742e-6■■□□□ 13.8
SDHA-203ENST00000503674 RRBP1Q9P2E9 1410 aaKnown RBP19.68■□□□□ 0.74
SDHA-203ENST00000503674 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
SDHA-203ENST00000503674 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
SDHA-203ENST00000503674 FHOD3Q2V2M9 1422 aa19.66■□□□□ 0.74
SDHA-203ENST00000503674 DDX10Q13206 875 aaKnown RBP19.65■□□□□ 0.74
SDHA-203ENST00000503674 ZNF608Q9ULD9 1512 aaPredicted RBP19.63■□□□□ 0.73
SDHA-203ENST00000503674 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
SDHA-203ENST00000503674 LRRC9Q6ZRR7 1453 aa19.62■□□□□ 0.73
SDHA-203ENST00000503674 TRIM52Q96A61 297 aa19.62■□□□□ 0.73
SDHA-203ENST00000503674 FMN1Q68DA7 1419 aa19.62■□□□□ 0.73
SDHA-203ENST00000503674 PPP1R15AO75807 674 aaPredicted RBP19.61■□□□□ 0.73
SDHA-203ENST00000503674 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
SDHA-203ENST00000503674 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
SDHA-203ENST00000503674 EIF4G3O43432 1585 aaKnown RBP19.59■□□□□ 0.73
SDHA-203ENST00000503674 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.72
SDHA-203ENST00000503674 IQGAP2Q13576 1575 aa19.57■□□□□ 0.72
SDHA-203ENST00000503674 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
SDHA-203ENST00000503674 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
SDHA-203ENST00000503674 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
SDHA-203ENST00000503674 CCNB3Q8WWL7 1395 aa19.55■□□□□ 0.72
SDHA-203ENST00000503674 CDK11AQ9UQ88 783 aaPredicted RBP19.52■□□□□ 0.72
SDHA-203ENST00000503674 RAB3GAP2Q9H2M9 1393 aa19.51■□□□□ 0.71
SDHA-203ENST00000503674 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
SDHA-203ENST00000503674 DEKP35659 375 aaKnown RBP19.51■□□□□ 0.71
SDHA-203ENST00000503674 ANP32CO43423 234 aa19.47■□□□□ 0.71
SDHA-203ENST00000503674 UGGT2Q9NYU1 1516 aa19.47■□□□□ 0.71
SDHA-203ENST00000503674 MAGI1Q96QZ7 1491 aaPredicted RBP19.47■□□□□ 0.71
SDHA-203ENST00000503674 PHLDB1Q86UU1 1377 aa19.45■□□□□ 0.7
SDHA-203ENST00000503674 GRIN2AQ12879 1464 aa19.45■□□□□ 0.7
SDHA-203ENST00000503674 KIAA0586Q9BVV6 1533 aa19.43■□□□□ 0.7
SDHA-203ENST00000503674 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
SDHA-203ENST00000503674 HECW1Q76N89 1606 aa19.41■□□□□ 0.7
SDHA-203ENST00000503674 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
SDHA-203ENST00000503674 CCDC18Q5T9S5 1454 aa19.39■□□□□ 0.7
SDHA-203ENST00000503674 HIRIP3Q9BW71 556 aaPredicted RBP19.39■□□□□ 0.69
SDHA-203ENST00000503674 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.69
SDHA-203ENST00000503674 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
SDHA-203ENST00000503674 EHBP1L1Q8N3D4 1523 aa19.38■□□□□ 0.69
SDHA-203ENST00000503674 KIAA0556O60303 1618 aa19.37■□□□□ 0.69
SDHA-203ENST00000503674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.37■□□□□ 0.69
SDHA-203ENST00000503674 SUPT6HQ7KZ85 1726 aaKnown RBP19.36■□□□□ 0.69
SDHA-203ENST00000503674 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
SDHA-203ENST00000503674 TIMELESSQ9UNS1 1208 aa19.36■□□□□ 0.69
SDHA-203ENST00000503674 MTUS2Q5JR59 1369 aa19.35■□□□□ 0.69
SDHA-203ENST00000503674 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.69
SDHA-203ENST00000503674 DISP1Q96F81 1524 aa19.33■□□□□ 0.68
SDHA-203ENST00000503674 CEP170Q5SW79 1584 aa19.33■□□□□ 0.68
SDHA-203ENST00000503674 ANO8Q9HCE9 1232 aaPredicted RBP19.31■□□□□ 0.68
SDHA-203ENST00000503674 FGD6Q6ZV73 1430 aa19.3■□□□□ 0.68
SDHA-203ENST00000503674 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
SDHA-203ENST00000503674 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
SDHA-203ENST00000503674 ARHGEF11O15085 1522 aa19.29■□□□□ 0.68
SDHA-203ENST00000503674 EPRSP07814 1512 aaKnown RBP19.29■□□□□ 0.68
SDHA-203ENST00000503674 NCOA2Q15596 1464 aa19.29■□□□□ 0.68
SDHA-203ENST00000503674 NUP160Q12769 1436 aa19.28■□□□□ 0.68
SDHA-203ENST00000503674 MAGI3Q5TCQ9 1506 aa19.28■□□□□ 0.68
SDHA-203ENST00000503674 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
SDHA-203ENST00000503674 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
SDHA-203ENST00000503674 MYOM3Q5VTT5 1437 aa19.25■□□□□ 0.67
SDHA-203ENST00000503674 FAM50AQ14320 339 aaKnown RBP19.25■□□□□ 0.67
SDHA-203ENST00000503674 RAPGEF6Q8TEU7 1601 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms